# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_76 - 234 UPF0020 PF01170.13 180 6e-06 19.5 0.0 1 2 0.00011 0.0088 9.2 0.0 103 120 17 34 5 75 0.83 # 58038 # 58739 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_76 - 234 UPF0020 PF01170.13 180 6e-06 19.5 0.0 2 2 0.00019 0.015 8.4 0.0 28 51 170 193 165 227 0.75 # 58038 # 58739 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_62 - 188 UPF0020 PF01170.13 180 2.1e-05 17.8 0.0 1 1 1.5e-06 0.00012 15.3 0.0 19 54 41 78 39 138 0.74 # 50631 # 51194 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 1_62 - 188 RrnaAD PF00398.15 262 4.1e-07 22.8 0.0 1 1 3.4e-09 5.5e-07 22.4 0.0 9 113 29 128 26 140 0.90 # 50631 # 51194 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 5_3 - 526 Seryl_tRNA_N PF02403.17 108 0.0013 12.4 8.8 1 3 0.0038 0.62 3.8 0.1 39 104 227 293 206 297 0.90 # 1190 # 2767 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 5_3 - 526 Seryl_tRNA_N PF02403.17 108 0.0013 12.4 8.8 2 3 0.0012 0.2 5.4 0.1 27 59 324 356 312 377 0.85 # 1190 # 2767 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 5_3 - 526 Seryl_tRNA_N PF02403.17 108 0.0013 12.4 8.8 3 3 0.00086 0.14 5.8 1.7 17 107 396 485 390 486 0.75 # 1190 # 2767 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 2_30 - 209 MipZ PF09140.6 261 2.8e-21 69.3 0.5 1 2 1.2e-12 1.9e-10 33.8 0.0 2 53 2 52 1 60 0.89 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_30 - 209 MipZ PF09140.6 261 2.8e-21 69.3 0.5 2 2 1.6e-12 2.6e-10 33.4 0.0 87 140 65 118 58 128 0.92 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_30 - 209 YhjQ PF06564.7 244 3.8e-05 16.7 0.3 1 2 1.8e-06 0.00029 13.8 0.3 4 38 3 37 1 50 0.89 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_30 - 209 YhjQ PF06564.7 244 3.8e-05 16.7 0.3 2 2 0.029 4.8 0.0 0.0 108 144 69 103 44 113 0.78 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_60 - 181 SSB PF00436.20 104 7.2e-42 135.1 0.4 1 1 5.5e-44 9.1e-42 134.8 0.4 1 99 6 105 6 113 0.97 # 49259 # 49801 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.619 1_62 - 188 Methyltransf_18 PF12847.2 112 1.6e-07 25.5 0.0 1 1 1.6e-09 2.6e-07 24.8 0.0 2 107 51 144 50 146 0.92 # 50631 # 51194 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 1_6 - 1754 UvrD_C_2 PF13538.1 104 2.5e-07 24.5 0.3 1 1 9.2e-09 1.5e-06 21.9 0.1 3 102 1340 1443 1333 1445 0.75 # 2613 # 7874 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.620 3_15 - 159 RNA_pol_L PF01193.19 66 0.0005 12.8 0.0 1 1 8e-06 0.0013 11.5 0.0 3 22 123 142 122 145 0.93 # 13813 # 14289 # 1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.589 1_26 - 880 DUF87 PF01935.12 229 3.9e-06 20.4 0.0 1 2 0.056 9.1 -0.4 0.2 113 171 312 362 304 396 0.60 # 24843 # 27482 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_26 - 880 DUF87 PF01935.12 229 3.9e-06 20.4 0.0 2 2 1.6e-07 2.6e-05 17.7 0.0 26 222 484 674 479 681 0.82 # 24843 # 27482 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_6 - 1754 AAA_22 PF13401.1 131 0.00011 15.9 0.0 1 2 0.0057 0.94 3.2 0.0 89 121 505 536 468 538 0.72 # 2613 # 7874 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.620 1_6 - 1754 AAA_22 PF13401.1 131 0.00011 15.9 0.0 2 2 0.00011 0.018 8.8 0.0 3 29 986 1012 983 1065 0.79 # 2613 # 7874 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.620 2_30 - 209 SRP54 PF00448.17 196 4.1e-07 23.2 0.1 1 1 1.5e-08 2.5e-06 20.7 0.1 4 98 2 91 1 134 0.80 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_76 - 234 N6_N4_Mtase PF01555.13 231 9.1e-33 107.2 0.0 1 2 3.3e-13 5.3e-11 36.0 0.0 1 113 21 130 21 137 0.85 # 58038 # 58739 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_76 - 234 N6_N4_Mtase PF01555.13 231 9.1e-33 107.2 0.0 2 2 2e-23 3.3e-21 69.4 0.0 170 227 149 206 135 210 0.92 # 58038 # 58739 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 2_30 - 209 AAA_17 PF13207.1 121 3.6e-05 18.2 0.0 1 1 4.2e-07 6.9e-05 17.3 0.0 9 77 11 84 9 205 0.76 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_30 - 209 MobB PF03205.9 140 9.7e-05 15.7 0.1 1 1 1.6e-06 0.00026 14.3 0.0 10 42 11 41 1 46 0.79 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_30 - 209 ArsA_ATPase PF02374.10 305 5.1e-08 25.8 0.4 1 2 1.2e-09 1.9e-07 24.0 0.1 3 48 3 48 1 69 0.85 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_30 - 209 ArsA_ATPase PF02374.10 305 5.1e-08 25.8 0.4 2 2 0.053 8.8 -1.2 0.0 121 135 69 85 47 86 0.75 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_30 - 209 VirC1 PF07015.6 231 4.5e-09 29.3 0.0 1 1 5.9e-11 9.7e-09 28.2 0.0 3 172 2 164 1 206 0.75 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_30 - 209 Fer4_NifH PF00142.13 273 0.00012 14.9 0.0 1 1 2.3e-06 0.00038 13.3 0.0 8 38 9 39 2 46 0.89 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_7 - 771 AAA_16 PF13191.1 185 4.6e-06 20.3 0.0 1 1 1.4e-07 2.3e-05 18.0 0.0 20 56 181 218 179 254 0.78 # 7874 # 10186 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 5_3 - 526 AAA_13 PF13166.1 712 0.0043 9.1 17.5 1 2 2.3e-05 0.0037 9.3 2.9 365 468 251 356 202 376 0.54 # 1190 # 2767 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 5_3 - 526 AAA_13 PF13166.1 712 0.0043 9.1 17.5 2 2 0.00032 0.053 5.5 7.0 322 439 392 519 372 525 0.75 # 1190 # 2767 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 2_30 - 209 CbiA PF01656.18 195 3.9e-22 72.2 0.0 1 1 4.7e-24 7.8e-22 71.2 0.0 1 154 3 137 3 178 0.78 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_62 - 188 N6_Mtase PF02384.11 311 0.00016 14.4 0.0 1 2 2.6e-05 0.0043 9.7 0.0 28 71 32 75 21 93 0.82 # 50631 # 51194 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 1_62 - 188 N6_Mtase PF02384.11 311 0.00016 14.4 0.0 2 2 0.0056 0.93 2.0 0.0 124 138 111 125 95 133 0.81 # 50631 # 51194 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 1_7 - 771 TraG-D_C PF12696.2 128 1.1e-19 64.1 0.0 1 1 1.6e-21 2.6e-19 63.0 0.0 1 127 419 541 419 542 0.88 # 7874 # 10186 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 2_30 - 209 AAA_31 PF13614.1 157 6.9e-06 19.7 0.0 1 2 2.5e-07 4.1e-05 17.1 0.0 2 42 2 42 1 55 0.88 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_30 - 209 AAA_31 PF13614.1 157 6.9e-06 19.7 0.0 2 2 0.055 9 -0.2 0.0 109 127 68 86 62 113 0.68 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_62 - 188 Methyltransf_26 PF13659.1 117 3e-13 43.5 0.1 1 1 5.9e-15 4.8e-13 42.8 0.1 2 111 52 144 51 148 0.90 # 50631 # 51194 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 1_76 - 234 Methyltransf_26 PF13659.1 117 4.4e-11 36.5 0.2 1 2 6.5e-07 5.3e-05 16.9 0.0 63 113 13 70 3 86 0.73 # 58038 # 58739 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_76 - 234 Methyltransf_26 PF13659.1 117 4.4e-11 36.5 0.2 2 2 3.9e-07 3.2e-05 17.6 0.1 4 44 174 213 171 228 0.80 # 58038 # 58739 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_6 - 1754 AAA_30 PF13604.1 196 3.6e-45 147.5 7.6 1 2 4.7e-07 7.7e-05 15.9 1.0 9 126 424 536 422 561 0.86 # 2613 # 7874 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.620 1_6 - 1754 AAA_30 PF13604.1 196 3.6e-45 147.5 7.6 2 2 4.9e-43 8e-41 133.3 0.8 2 186 971 1158 970 1162 0.94 # 2613 # 7874 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.620 1_26 - 880 FtsK_SpoIIIE PF01580.13 205 0.00018 14.6 0.0 1 1 2.7e-06 0.00044 13.3 0.0 39 63 480 506 466 508 0.85 # 24843 # 27482 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_62 - 188 MTS PF05175.9 170 1.8e-09 30.8 0.0 1 1 1.5e-11 2.5e-09 30.3 0.0 24 142 43 150 38 170 0.84 # 50631 # 51194 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 1_76 - 234 Cons_hypoth95 PF03602.10 183 4.9e-06 19.6 0.0 1 2 0.00012 0.02 7.8 0.0 113 170 19 78 12 86 0.73 # 58038 # 58739 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_76 - 234 Cons_hypoth95 PF03602.10 183 4.9e-06 19.6 0.0 2 2 3.1e-05 0.0051 9.8 0.0 20 60 149 188 142 225 0.73 # 58038 # 58739 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_6 - 1754 AAA_19 PF13245.1 76 6.6e-07 22.7 0.8 1 1 8.1e-09 6.6e-07 22.7 0.8 8 74 984 1047 976 1050 0.71 # 2613 # 7874 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.620 2_30 - 209 AAA_19 PF13245.1 76 0.00092 12.6 0.1 1 2 0.00019 0.016 8.6 0.0 20 48 11 35 9 44 0.84 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_30 - 209 AAA_19 PF13245.1 76 0.00092 12.6 0.1 2 2 0.044 3.6 1.1 0.0 42 62 135 155 118 180 0.75 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_62 - 188 Methyltransf_2 PF00891.13 242 0.0019 11.0 0.0 1 1 1.7e-05 0.0029 10.4 0.0 111 159 60 110 40 119 0.83 # 50631 # 51194 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 1_26 - 880 AAA_10 PF12846.2 304 9.5e-46 150.1 0.0 1 1 3.7e-47 1.5e-45 149.5 0.0 1 294 481 773 481 779 0.85 # 24843 # 27482 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_7 - 771 AAA_10 PF12846.2 304 3.5e-09 30.0 0.0 1 2 2e-05 0.00084 12.4 0.0 3 43 187 227 186 260 0.92 # 7874 # 10186 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_7 - 771 AAA_10 PF12846.2 304 3.5e-09 30.0 0.0 2 2 2.3e-06 9.3e-05 15.5 0.0 201 296 398 494 282 499 0.85 # 7874 # 10186 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 2_30 - 209 AAA_10 PF12846.2 304 0.00026 14.1 0.0 1 1 1e-05 0.00041 13.4 0.0 11 39 11 39 3 67 0.90 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_23 - 132 AAA_10 PF12846.2 304 0.0013 11.8 0.0 1 2 0.00027 0.011 8.7 0.0 241 264 12 35 9 45 0.89 # 15352 # 15747 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.548 2_23 - 132 AAA_10 PF12846.2 304 0.0013 11.8 0.0 2 2 0.054 2.2 1.2 0.0 209 235 104 128 68 130 0.72 # 15352 # 15747 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.548 2_13 - 189 NodS PF05401.6 201 0.0014 11.6 0.0 1 2 0.051 8.3 -0.7 0.0 42 154 32 57 17 65 0.62 # 8200 # 8766 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.679 2_13 - 189 NodS PF05401.6 201 0.0014 11.6 0.0 2 2 3.2e-05 0.0053 9.7 0.0 25 70 97 142 89 170 0.84 # 8200 # 8766 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.679 2_23 - 132 Zot PF05707.7 193 0.00043 13.4 0.0 1 1 4.7e-06 0.00078 12.5 0.0 98 127 5 35 1 46 0.82 # 15352 # 15747 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.548 1_7 - 771 TrwB_AAD_bind PF10412.4 386 1.1e-148 488.5 0.0 1 1 1.7e-150 1.4e-148 488.2 0.0 2 386 172 561 171 561 0.99 # 7874 # 10186 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_26 - 880 TrwB_AAD_bind PF10412.4 386 2.5e-05 16.6 0.2 1 1 8e-07 6.6e-05 15.2 0.0 16 91 482 553 474 569 0.71 # 24843 # 27482 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 1_6 - 1754 AAA_11 PF13086.1 236 2.5e-05 17.5 2.7 1 2 3.8e-07 6.2e-05 16.2 0.0 2 72 971 1038 970 1065 0.83 # 2613 # 7874 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.620 1_6 - 1754 AAA_11 PF13086.1 236 2.5e-05 17.5 2.7 2 2 0.033 5.5 0.0 0.0 3 35 1182 1213 1180 1339 0.70 # 2613 # 7874 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.620 1_7 - 771 T4SS-DNA_transf PF02534.9 469 1.6e-08 27.1 0.0 1 2 0.035 5.7 -1.1 0.0 128 199 260 330 249 359 0.73 # 7874 # 10186 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_7 - 771 T4SS-DNA_transf PF02534.9 469 1.6e-08 27.1 0.0 2 2 3.4e-10 5.5e-08 25.3 0.0 275 393 393 507 363 559 0.74 # 7874 # 10186 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_62 - 188 TIGR00755 TIGR00755 256 1e-07 24.7 0.0 1 1 9e-10 1.5e-07 24.2 0.0 8 105 29 123 26 128 0.90 # 50631 # 51194 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 1_26 - 880 Pox_A32 PF04665.7 241 0.00012 15.0 0.0 1 1 1.5e-06 0.00025 14.0 0.0 6 40 474 508 470 523 0.82 # 24843 # 27482 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.544 2_30 - 209 AAA_25 PF13481.1 194 0.00022 14.3 0.1 1 1 3.1e-06 0.00051 13.1 0.0 42 87 10 44 3 90 0.78 # 18854 # 19480 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_76 - 234 Methyltransf_15 PF09445.5 164 0.0012 12.0 0.0 1 2 0.023 3.8 0.6 0.0 53 80 4 30 2 38 0.91 # 58038 # 58739 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_76 - 234 Methyltransf_15 PF09445.5 164 0.0012 12.0 0.0 2 2 7e-05 0.011 8.8 0.0 3 30 173 200 171 213 0.90 # 58038 # 58739 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/d6de08c8-be08-45b7-8d2d-7f938a3e8acd # Target file: checkm_output/bins/pm1042/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1042/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d6de08c8-be08-45b7-8d2d-7f938a3e8acd checkm_output/bins/pm1042/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:52:42 2020 # [ok]