# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_44 - 61 Mg_chelatase PF01078.16 207 0.00014 14.9 0.0 1 1 7.1e-07 0.00014 14.9 0.0 18 47 4 34 1 57 0.81 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_13 - 227 UPF0020 PF01170.13 180 6.8e-06 19.6 0.0 1 2 0.00013 0.026 7.9 0.0 103 122 17 36 8 86 0.74 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 1_13 - 227 UPF0020 PF01170.13 180 6.8e-06 19.6 0.0 2 2 3.7e-05 0.0073 9.7 0.0 27 52 162 187 158 212 0.75 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 1_27 - 98 Seryl_tRNA_N PF02403.17 108 0.0018 12.2 1.3 1 1 2.1e-05 0.0042 11.0 1.3 44 96 21 83 5 89 0.55 # 20173 # 20466 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 3_4 - 261 IstB_IS21 PF01695.12 178 2.8e-72 235.7 0.1 1 2 0.099 9.6 -0.6 0.0 64 97 26 58 25 62 0.64 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 3_4 - 261 IstB_IS21 PF01695.12 178 2.8e-72 235.7 0.1 2 2 6e-74 5.9e-72 234.6 0.0 1 178 57 236 57 236 0.98 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_97 - 871 IstB_IS21 PF01695.12 178 1.9e-07 24.5 0.1 1 2 0.00013 0.013 8.8 0.0 34 72 206 244 183 300 0.81 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 IstB_IS21 PF01695.12 178 1.9e-07 24.5 0.1 2 2 1.5e-05 0.0015 11.8 0.0 50 70 607 627 604 648 0.85 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 4_9 - 289 MipZ PF09140.6 261 1.4e-07 24.7 0.0 1 2 0.00029 0.028 7.3 0.0 2 39 11 48 10 60 0.92 # 5639 # 6505 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.445 4_9 - 289 MipZ PF09140.6 261 1.4e-07 24.7 0.0 2 2 9.5e-07 9.3e-05 15.4 0.0 72 127 106 162 86 165 0.82 # 5639 # 6505 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.445 1_8 - 159 MipZ PF09140.6 261 1.6e-06 21.2 0.1 1 2 3.3e-07 3.2e-05 16.9 0.0 85 143 11 69 6 79 0.90 # 6875 # 7351 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_8 - 159 MipZ PF09140.6 261 1.6e-06 21.2 0.1 2 2 0.0093 0.91 2.3 0.0 215 237 124 146 113 156 0.73 # 6875 # 7351 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_18 - 186 SSB PF00436.20 104 4.3e-43 139.3 0.6 1 1 3.4e-45 6.6e-43 138.7 0.6 1 100 6 109 6 113 0.95 # 13648 # 14205 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.609 1_62 - 1747 UvrD_C_2 PF13538.1 104 4.9e-06 20.5 0.1 1 1 2.3e-07 4.6e-05 17.4 0.0 3 100 1337 1438 1335 1442 0.75 # 48577 # 53817 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.657 1_97 - 871 AAA_2 PF07724.9 171 3.8e-42 137.9 0.0 1 2 0.047 9.1 -0.0 0.1 7 29 223 245 217 317 0.56 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_2 PF07724.9 171 3.8e-42 137.9 0.0 2 2 1.6e-43 3.1e-41 134.9 0.0 1 168 602 767 602 770 0.97 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_47 - 877 DUF87 PF01935.12 229 6.6e-06 19.9 0.0 1 1 2.2e-07 2.1e-05 18.3 0.0 26 215 482 664 480 677 0.59 # 31203 # 33833 # 1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.595 1_44 - 61 DUF87 PF01935.12 229 6.7e-05 16.6 0.1 1 1 7.9e-07 7.7e-05 16.4 0.1 27 52 12 37 9 45 0.86 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 AAA_22 PF13401.1 131 1.4e-10 35.3 1.7 1 2 8.6e-06 0.00042 14.3 0.0 8 101 223 309 215 343 0.72 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_22 PF13401.1 131 1.4e-10 35.3 1.7 2 2 1.5e-05 0.00073 13.5 0.0 6 31 606 631 603 657 0.77 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_4 - 261 AAA_22 PF13401.1 131 4.6e-06 20.7 0.2 1 2 8.2e-05 0.004 11.2 0.0 5 22 104 121 100 138 0.83 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 3_4 - 261 AAA_22 PF13401.1 131 4.6e-06 20.7 0.2 2 2 0.0022 0.11 6.5 0.0 88 103 156 182 127 204 0.67 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_44 - 61 AAA_22 PF13401.1 131 0.00041 14.4 0.0 1 1 8.6e-06 0.00042 14.3 0.0 3 28 7 32 4 54 0.84 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_6 - 503 AAA_22 PF13401.1 131 0.0021 12.0 1.3 1 2 0.033 1.6 2.7 0.6 37 88 29 79 10 92 0.77 # 5910 # 7418 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_6 - 503 AAA_22 PF13401.1 131 0.0021 12.0 1.3 2 2 0.0014 0.066 7.2 0.0 12 85 266 351 264 412 0.76 # 5910 # 7418 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 1_44 - 61 ATP_bind_1 PF03029.12 238 0.00099 12.5 0.1 1 1 6.1e-06 0.0012 12.2 0.1 1 25 13 37 13 40 0.85 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 SRP54 PF00448.17 196 6.7e-05 16.2 0.2 1 2 0.0073 1.4 2.1 0.0 4 25 222 243 219 250 0.85 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 SRP54 PF00448.17 196 6.7e-05 16.2 0.2 2 2 1.4e-05 0.0028 10.9 0.0 3 37 606 640 604 648 0.82 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_13 - 227 N6_N4_Mtase PF01555.13 231 6.7e-37 121.0 0.0 1 1 1.4e-36 2.7e-34 112.5 0.0 1 227 21 199 21 203 0.90 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 1_97 - 871 AAA_17 PF13207.1 121 2.5e-07 25.4 0.1 1 2 0.0067 1.3 3.7 0.0 3 24 223 247 222 303 0.68 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_17 PF13207.1 121 2.5e-07 25.4 0.1 2 2 3.6e-07 6.9e-05 17.5 0.0 2 33 607 643 606 726 0.79 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_44 - 61 MobB PF03205.9 140 0.00024 14.7 0.0 1 1 1.4e-06 0.00027 14.5 0.0 4 27 12 35 10 57 0.84 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_4 - 261 PhoH PF02562.11 205 3.2e-08 26.9 0.4 1 2 0.005 0.98 2.4 0.1 47 112 5 69 1 78 0.79 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 3_4 - 261 PhoH PF02562.11 205 3.2e-08 26.9 0.4 2 2 4.6e-09 9e-07 22.1 0.0 11 48 95 132 85 146 0.81 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_44 - 61 T2SE PF00437.15 272 6.6e-07 22.3 0.1 1 1 7.4e-09 7.2e-07 22.2 0.1 123 153 3 33 1 40 0.88 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 T2SE PF00437.15 272 0.00011 15.0 0.0 1 2 0.0032 0.31 3.7 0.0 115 149 208 240 175 248 0.70 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 T2SE PF00437.15 272 0.00011 15.0 0.0 2 2 8.8e-05 0.0086 8.8 0.0 128 206 604 684 568 689 0.75 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_44 - 61 AAA_26 PF13500.1 199 0.00017 15.0 0.0 1 1 8.9e-07 0.00017 15.0 0.0 4 30 11 37 8 58 0.77 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 Zeta_toxin PF06414.7 201 1.1e-06 21.7 0.0 1 2 0.055 5.3 -0.1 0.0 19 40 222 243 210 248 0.80 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 Zeta_toxin PF06414.7 201 1.1e-06 21.7 0.0 2 2 1.4e-07 1.4e-05 18.1 0.0 14 58 601 657 588 707 0.76 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_61 - 722 Zeta_toxin PF06414.7 201 0.0014 11.5 0.0 1 2 8.2e-05 0.008 9.1 0.0 21 51 190 220 182 262 0.83 # 46412 # 48577 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_61 - 722 Zeta_toxin PF06414.7 201 0.0014 11.5 0.0 2 2 0.074 7.2 -0.5 0.0 54 90 283 320 279 337 0.87 # 46412 # 48577 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_97 - 871 Arch_ATPase PF01637.13 234 1e-05 19.2 0.0 1 3 0.00012 0.012 9.2 0.0 4 38 203 237 201 246 0.93 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 Arch_ATPase PF01637.13 234 1e-05 19.2 0.0 2 3 0.01 0.98 2.9 0.0 103 135 276 307 266 377 0.80 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 Arch_ATPase PF01637.13 234 1e-05 19.2 0.0 3 3 0.023 2.3 1.7 0.0 22 64 606 647 600 702 0.77 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_4 - 261 Arch_ATPase PF01637.13 234 0.0017 11.9 0.1 1 1 5e-05 0.0049 10.4 0.1 8 38 91 121 88 202 0.81 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_97 - 871 AAA_16 PF13191.1 185 2.4e-12 41.1 8.3 1 3 1.1e-08 5.1e-07 23.7 0.0 3 49 201 244 199 256 0.88 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_16 PF13191.1 185 2.4e-12 41.1 8.3 2 3 0.0032 0.16 5.8 0.0 127 160 268 301 259 329 0.84 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_16 PF13191.1 185 2.4e-12 41.1 8.3 3 3 0.00026 0.013 9.3 0.1 23 71 603 652 579 809 0.81 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_61 - 722 AAA_16 PF13191.1 185 3e-06 21.2 0.0 1 1 4.6e-07 2.2e-05 18.3 0.0 20 55 181 225 177 267 0.67 # 46412 # 48577 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 3_4 - 261 AAA_16 PF13191.1 185 0.00016 15.6 0.9 1 1 9.3e-06 0.00046 14.1 0.1 9 41 91 120 88 163 0.79 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_80 - 1209 AAA_16 PF13191.1 185 0.0004 14.3 4.4 1 2 1.5e-05 0.00072 13.4 0.0 26 131 143 260 113 287 0.65 # 67612 # 71238 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_80 - 1209 AAA_16 PF13191.1 185 0.0004 14.3 4.4 2 2 0.093 4.5 1.0 0.3 69 160 825 916 729 939 0.65 # 67612 # 71238 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_44 - 61 AAA_23 PF13476.1 202 0.00069 13.8 0.0 1 1 3.7e-06 0.00072 13.8 0.0 20 59 9 48 6 60 0.66 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 AAA_18 PF13238.1 129 6.8e-06 20.3 1.2 1 2 0.00097 0.19 5.9 0.0 2 22 223 243 223 279 0.87 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_18 PF13238.1 129 6.8e-06 20.3 1.2 2 2 1.4e-05 0.0028 11.8 0.1 3 23 609 636 608 660 0.78 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 4_9 - 289 CbiA PF01656.18 195 1.5e-14 47.7 0.0 1 1 2.2e-16 2.2e-14 47.2 0.0 1 158 12 201 12 233 0.76 # 5639 # 6505 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.445 1_8 - 159 CbiA PF01656.18 195 1.6e-05 18.2 0.0 1 1 1.9e-07 1.9e-05 18.0 0.0 82 146 13 76 4 129 0.76 # 6875 # 7351 # -1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.413 1_97 - 871 AAA_14 PF13173.1 128 1.5e-08 28.4 0.0 1 3 0.0029 0.28 4.9 0.0 6 74 223 304 218 359 0.60 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_14 PF13173.1 128 1.5e-08 28.4 0.0 2 3 0.085 8.3 0.2 0.0 11 70 329 389 320 440 0.70 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_14 PF13173.1 128 1.5e-08 28.4 0.0 3 3 2.1e-07 2e-05 18.3 0.0 4 89 606 717 604 732 0.66 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_4 - 261 AAA_14 PF13173.1 128 1.3e-06 22.2 0.0 1 1 2.4e-08 2.4e-06 21.3 0.0 2 96 103 204 102 222 0.67 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_97 - 871 AAA_29 PF13555.1 62 4.8e-06 19.9 0.0 1 2 8.6e-05 0.0056 10.1 0.0 19 43 215 239 207 246 0.83 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_29 PF13555.1 62 4.8e-06 19.9 0.0 2 2 0.0011 0.072 6.5 0.0 23 51 605 632 597 642 0.79 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_44 - 61 AAA_29 PF13555.1 62 0.0011 12.3 0.2 1 1 2.4e-05 0.0015 11.9 0.2 21 51 7 36 3 41 0.76 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_4 - 261 AAA_29 PF13555.1 62 0.0015 11.9 0.0 1 1 4.4e-05 0.0028 11.0 0.0 19 59 99 140 90 142 0.72 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_97 - 871 AAA PF00004.24 132 1.3e-22 74.3 0.0 1 2 1.1e-13 1.1e-11 38.9 0.0 2 126 223 355 222 360 0.74 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA PF00004.24 132 1.3e-22 74.3 0.0 2 2 2.3e-11 2.2e-09 31.5 0.0 2 74 608 692 607 737 0.73 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_4 - 261 AAA PF00004.24 132 2.9e-07 24.6 0.0 1 1 5.3e-09 5.1e-07 23.8 0.0 1 74 106 181 106 215 0.77 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 3_4 - 261 Bac_DnaA PF00308.13 219 2.5e-09 30.9 0.0 1 1 1.9e-11 3.7e-09 30.3 0.0 36 136 105 203 76 208 0.85 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_97 - 871 Sigma54_activat PF00158.21 168 6.4e-09 29.3 0.0 1 2 0.0012 0.12 5.7 0.0 20 40 217 237 200 258 0.75 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 Sigma54_activat PF00158.21 168 6.4e-09 29.3 0.0 2 2 4.6e-08 4.5e-06 20.1 0.0 25 141 607 723 584 735 0.81 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_4 - 261 Sigma54_activat PF00158.21 168 0.00015 15.1 0.1 1 1 9.7e-06 0.00094 12.5 0.1 18 68 99 149 83 200 0.69 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_31 - 277 N6_Mtase PF02384.11 311 7e-11 35.5 0.0 1 1 5.1e-13 9.9e-11 35.0 0.0 24 120 137 239 128 254 0.83 # 21252 # 22082 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.562 3_4 - 261 DUF258 PF03193.11 161 1.8e-05 17.8 0.0 1 1 2.9e-07 2.8e-05 17.2 0.0 22 80 90 160 71 195 0.71 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_97 - 871 DUF258 PF03193.11 161 0.00023 14.2 0.0 1 2 0.0016 0.15 5.1 0.0 33 56 217 240 185 256 0.76 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 DUF258 PF03193.11 161 0.00023 14.2 0.0 2 2 0.00058 0.057 6.4 0.0 37 56 606 625 582 653 0.76 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_61 - 722 TraG-D_C PF12696.2 128 1.7e-18 60.5 0.0 1 1 5.4e-20 5.2e-18 59.0 0.0 1 127 419 541 419 542 0.85 # 46412 # 48577 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_47 - 877 TraG-D_C PF12696.2 128 0.0017 12.1 0.2 1 1 3.5e-05 0.0034 11.1 0.2 18 74 715 771 706 775 0.91 # 31203 # 33833 # 1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.595 4_9 - 289 AAA_31 PF13614.1 157 6.7e-05 16.7 0.0 1 1 3.1e-06 0.00061 13.6 0.0 1 148 10 163 10 171 0.82 # 5639 # 6505 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.445 1_97 - 871 NTPase_1 PF03266.10 168 0.00026 14.6 0.2 1 2 0.00079 0.077 6.5 0.0 3 23 223 243 221 250 0.83 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 NTPase_1 PF03266.10 168 0.00026 14.6 0.2 2 2 0.0034 0.34 4.5 0.0 2 24 607 629 606 646 0.85 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_4 - 261 NTPase_1 PF03266.10 168 0.0003 14.4 0.2 1 2 0.004 0.39 4.2 0.1 2 30 106 134 105 139 0.77 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 3_4 - 261 NTPase_1 PF03266.10 168 0.0003 14.4 0.2 2 2 0.00031 0.03 7.8 0.0 88 112 158 182 144 204 0.73 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_44 - 61 AAA_33 PF13671.1 143 0.0011 12.7 0.0 1 1 1.2e-05 0.0012 12.6 0.0 3 23 12 32 11 58 0.78 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 AAA_33 PF13671.1 143 0.0014 12.4 0.9 1 1 0.0001 0.0098 9.6 0.0 1 23 606 628 606 658 0.82 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_13 - 227 Methyltransf_26 PF13659.1 117 6.7e-12 39.3 0.1 1 2 1.9e-07 1.8e-05 18.6 0.0 57 114 7 71 2 74 0.72 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 1_13 - 227 Methyltransf_26 PF13659.1 117 6.7e-12 39.3 0.1 2 2 1.7e-07 1.6e-05 18.8 0.1 4 35 167 197 164 221 0.82 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 1_31 - 277 Methyltransf_26 PF13659.1 117 0.00069 13.5 0.0 1 1 1.6e-05 0.0016 12.3 0.0 3 63 170 237 168 263 0.81 # 21252 # 22082 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.562 1_62 - 1747 AAA_30 PF13604.1 196 8.3e-42 136.8 10.5 1 2 1.5e-05 0.0029 11.0 2.4 8 149 419 552 415 559 0.85 # 48577 # 53817 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.657 1_62 - 1747 AAA_30 PF13604.1 196 8.3e-42 136.8 10.5 2 2 6.7e-42 1.3e-39 129.6 0.1 2 185 967 1154 966 1160 0.90 # 48577 # 53817 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.657 1_44 - 61 FtsK_SpoIIIE PF01580.13 205 2.6e-05 17.6 0.1 1 1 4.9e-07 3.2e-05 17.3 0.1 36 64 6 34 3 40 0.87 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 FtsK_SpoIIIE PF01580.13 205 6e-05 16.4 0.1 1 1 1.1e-05 0.00069 13.0 0.0 27 82 207 266 181 310 0.82 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_47 - 877 FtsK_SpoIIIE PF01580.13 205 0.00023 14.5 0.2 1 1 1.1e-05 0.00073 12.9 0.0 39 63 476 504 459 507 0.85 # 31203 # 33833 # 1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.595 3_4 - 261 ABC_tran PF00005.22 137 0.00023 15.3 0.3 1 2 2.7e-05 0.0026 11.9 0.0 8 30 100 122 94 131 0.86 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 3_4 - 261 ABC_tran PF00005.22 137 0.00023 15.3 0.3 2 2 0.087 8.4 0.5 0.0 108 134 145 173 129 174 0.72 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_97 - 871 ABC_tran PF00005.22 137 0.001 13.2 0.2 1 2 0.067 6.6 0.9 0.0 16 32 224 240 217 289 0.84 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 ABC_tran PF00005.22 137 0.001 13.2 0.2 2 2 0.0004 0.039 8.1 0.0 14 51 607 645 602 656 0.75 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_13 - 227 Cons_hypoth95 PF03602.10 183 2.7e-05 17.5 0.0 1 2 0.00027 0.053 6.7 0.0 113 160 19 68 10 83 0.65 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 1_13 - 227 Cons_hypoth95 PF03602.10 183 2.7e-05 17.5 0.0 2 2 6.2e-05 0.012 8.8 0.0 41 61 162 182 145 205 0.82 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 1_61 - 722 DAP3 PF10236.4 309 0.00028 13.7 0.0 1 1 2.5e-06 0.00049 12.9 0.0 23 72 185 234 170 244 0.85 # 46412 # 48577 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_97 - 871 RuvB_N PF05496.7 234 5.7e-05 16.1 0.2 1 4 0.059 5.8 -0.3 0.0 52 71 221 240 181 250 0.72 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 RuvB_N PF05496.7 234 5.7e-05 16.1 0.2 2 4 0.0042 0.41 3.5 0.0 92 113 279 303 263 307 0.74 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 RuvB_N PF05496.7 234 5.7e-05 16.1 0.2 3 4 0.0009 0.088 5.6 0.0 27 74 577 628 558 638 0.74 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 RuvB_N PF05496.7 234 5.7e-05 16.1 0.2 4 4 0.03 3 0.6 0.0 101 126 676 701 666 708 0.86 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_4 - 261 RuvB_N PF05496.7 234 0.00049 13.0 0.0 1 1 1.1e-05 0.0011 11.9 0.0 50 119 103 183 90 191 0.68 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_62 - 1747 AAA_19 PF13245.1 76 2.6e-08 27.4 0.1 1 1 3.4e-09 1.3e-07 25.1 0.1 6 75 978 1045 973 1046 0.77 # 48577 # 53817 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.657 1_97 - 871 AAA_19 PF13245.1 76 2.3e-07 24.4 0.1 1 2 0.00029 0.011 9.3 0.0 11 39 222 247 212 254 0.66 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_19 PF13245.1 76 2.3e-07 24.4 0.1 2 2 6.7e-05 0.0026 11.4 0.0 11 35 605 629 595 648 0.85 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_44 - 61 AAA_19 PF13245.1 76 3.3e-05 17.5 0.0 1 1 8.6e-07 3.3e-05 17.5 0.0 6 36 4 37 1 55 0.71 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_4 - 261 AAA_19 PF13245.1 76 0.0008 13.0 0.0 1 1 5e-05 0.002 11.8 0.0 10 37 104 130 97 155 0.79 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_80 - 1209 AAA_19 PF13245.1 76 0.0013 12.4 0.0 1 1 0.0001 0.0039 10.8 0.0 13 29 144 160 138 176 0.84 # 67612 # 71238 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_44 - 61 DUF463 PF04317.7 443 0.0014 11.0 0.0 1 1 7.3e-06 0.0014 11.0 0.0 5 29 13 37 10 56 0.85 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_47 - 877 AAA_10 PF12846.2 304 1.6e-46 152.9 0.0 1 1 5.5e-48 2.7e-46 152.2 0.0 1 294 479 770 479 776 0.88 # 31203 # 33833 # 1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.595 1_61 - 722 AAA_10 PF12846.2 304 1.7e-08 28.0 0.0 1 1 6.3e-09 3.1e-07 23.9 0.0 3 295 187 493 186 499 0.71 # 46412 # 48577 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 3_4 - 261 AAA_10 PF12846.2 304 1.2e-05 18.7 0.6 1 2 4e-06 0.00019 14.7 0.0 1 33 103 135 103 172 0.90 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 3_4 - 261 AAA_10 PF12846.2 304 1.2e-05 18.7 0.6 2 2 0.071 3.5 0.8 0.0 213 247 154 193 136 203 0.67 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_44 - 61 AAA_10 PF12846.2 304 0.00015 15.1 0.2 1 1 3.4e-06 0.00016 15.0 0.2 2 27 9 34 8 38 0.92 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_44 - 61 ResIII PF04851.10 184 0.00045 13.9 0.0 1 1 4.6e-06 0.00045 13.9 0.0 26 51 9 34 3 56 0.86 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_4 - 261 ResIII PF04851.10 184 0.00078 13.1 0.0 1 2 8.5e-05 0.0083 9.8 0.0 7 51 89 129 73 141 0.77 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 3_4 - 261 ResIII PF04851.10 184 0.00078 13.1 0.0 2 2 0.034 3.3 1.3 0.0 113 163 133 182 129 205 0.67 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_80 - 1209 Viral_helicase1 PF01443.13 234 0.0026 11.1 0.2 1 2 0.0003 0.059 6.7 0.1 2 17 145 160 144 164 0.89 # 67612 # 71238 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_80 - 1209 Viral_helicase1 PF01443.13 234 0.0026 11.1 0.2 2 2 0.0083 1.6 2.0 0.0 163 206 244 284 204 293 0.78 # 67612 # 71238 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_44 - 61 DUF2075 PF09848.4 352 0.00016 14.6 0.0 1 1 8e-07 0.00016 14.6 0.0 4 26 11 40 8 58 0.75 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 TIP49 PF06068.8 398 0.0009 11.8 0.1 1 4 0.0066 1.3 1.4 0.0 54 75 223 244 207 263 0.82 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 TIP49 PF06068.8 398 0.0009 11.8 0.1 2 4 0.019 3.7 -0.1 0.0 267 290 280 303 269 304 0.73 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 TIP49 PF06068.8 398 0.0009 11.8 0.1 3 4 0.00053 0.1 5.0 0.0 53 88 607 643 599 651 0.82 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 TIP49 PF06068.8 398 0.0009 11.8 0.1 4 4 0.097 19 -2.4 0.0 333 365 760 792 759 802 0.83 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_44 - 61 DEAD PF00270.24 169 6.2e-05 16.4 0.1 1 1 3.6e-07 7e-05 16.2 0.1 10 43 4 36 2 48 0.83 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 DUF815 PF05673.8 250 0.00014 14.7 0.1 1 2 2.3e-05 0.0044 9.8 0.0 36 114 203 298 184 301 0.60 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 DUF815 PF05673.8 250 0.00014 14.7 0.1 2 2 0.011 2.2 0.9 0.0 56 97 607 648 574 660 0.86 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_61 - 722 TrwB_AAD_bind PF10412.4 386 1.2e-147 485.4 0.0 1 1 2.3e-149 1.5e-147 485.0 0.0 2 385 172 560 171 561 0.99 # 46412 # 48577 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_47 - 877 TrwB_AAD_bind PF10412.4 386 2.6e-06 20.1 0.6 1 1 1.1e-07 7.5e-06 18.6 0.1 17 54 481 518 473 556 0.80 # 31203 # 33833 # 1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.595 1_44 - 61 TrwB_AAD_bind PF10412.4 386 0.0004 12.9 0.1 1 1 6.3e-06 0.00041 12.8 0.1 15 41 8 34 3 46 0.85 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_62 - 1747 AAA_11 PF13086.1 236 2.8e-06 20.9 0.0 1 1 4.1e-08 8e-06 19.4 0.0 2 72 967 1034 966 1056 0.81 # 48577 # 53817 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.657 1_61 - 722 T4SS-DNA_transf PF02534.9 469 1.7e-08 27.2 0.0 1 1 5.6e-10 5.5e-08 25.6 0.0 251 371 363 486 198 542 0.78 # 46412 # 48577 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_47 - 877 T4SS-DNA_transf PF02534.9 469 0.00098 11.6 0.1 1 2 0.0072 0.7 2.1 0.0 105 181 533 605 470 686 0.79 # 31203 # 33833 # 1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.595 1_47 - 877 T4SS-DNA_transf PF02534.9 469 0.00098 11.6 0.1 2 2 0.00026 0.025 6.9 0.2 321 378 715 771 703 773 0.94 # 31203 # 33833 # 1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.595 1_13 - 227 MethyltransfD12 PF02086.10 260 0.00057 13.2 0.0 1 2 0.014 2.7 1.2 0.0 176 188 19 31 12 87 0.83 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 1_13 - 227 MethyltransfD12 PF02086.10 260 0.00057 13.2 0.0 2 2 2.9e-05 0.0057 9.9 0.0 20 46 163 189 148 196 0.79 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 1_47 - 877 Pox_A32 PF04665.7 241 0.00034 13.8 0.2 1 1 7.8e-06 0.0015 11.6 0.0 11 39 477 505 470 520 0.85 # 31203 # 33833 # 1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.595 3_2 - 649 Plug PF07715.10 108 9e-12 39.2 0.0 1 2 7.4e-13 1.4e-10 35.3 0.0 20 108 22 112 7 112 0.91 # 1338 # 3284 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 3_2 - 649 Plug PF07715.10 108 9e-12 39.2 0.0 2 2 0.031 6.1 1.1 0.0 10 38 220 261 216 303 0.78 # 1338 # 3284 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.526 1_97 - 871 RNA_helicase PF00910.17 107 3.3e-05 17.9 0.0 1 2 0.0032 0.31 5.1 0.0 3 23 224 244 223 253 0.89 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 RNA_helicase PF00910.17 107 3.3e-05 17.9 0.0 2 2 0.00024 0.024 8.7 0.0 2 23 608 629 607 653 0.81 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_44 - 61 RNA_helicase PF00910.17 107 0.00055 14.0 0.0 1 1 6.2e-06 0.00061 13.8 0.0 3 26 13 36 11 56 0.78 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 UPF0079 PF02367.12 123 0.00032 14.2 0.0 1 2 0.0016 0.16 5.5 0.0 19 39 223 243 217 252 0.86 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 UPF0079 PF02367.12 123 0.00032 14.2 0.0 2 2 0.0012 0.12 5.9 0.0 14 45 603 635 594 643 0.82 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_44 - 61 UPF0079 PF02367.12 123 0.00046 13.7 0.1 1 1 5.2e-06 0.0005 13.6 0.1 18 39 11 32 1 41 0.80 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_4 - 261 AAA_24 PF13479.1 213 0.0019 11.6 0.0 1 2 3.5e-05 0.0069 9.8 0.0 3 21 103 121 101 128 0.84 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 3_4 - 261 AAA_24 PF13479.1 213 0.0019 11.6 0.0 2 2 0.09 18 -1.3 0.0 12 30 152 172 133 176 0.88 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_97 - 871 NACHT PF05729.7 166 2.3e-06 21.2 3.4 1 2 3e-06 0.00029 14.4 0.1 4 33 223 252 221 335 0.83 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 NACHT PF05729.7 166 2.3e-06 21.2 3.4 2 2 0.0086 0.84 3.1 0.0 4 30 608 634 606 654 0.78 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_44 - 61 NACHT PF05729.7 166 5.6e-05 16.7 0.0 1 1 6.7e-07 6.5e-05 16.5 0.0 4 28 12 36 10 43 0.89 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_97 - 871 AAA_25 PF13481.1 194 1.4e-07 24.9 2.1 1 3 7.4e-05 0.0048 10.1 0.0 31 61 217 247 188 261 0.75 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_25 PF13481.1 194 1.4e-07 24.9 2.1 2 3 0.042 2.7 1.1 0.0 127 170 276 320 256 325 0.80 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_25 PF13481.1 194 1.4e-07 24.9 2.1 3 3 0.00018 0.011 8.9 0.0 30 58 601 629 582 649 0.78 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_4 - 261 AAA_25 PF13481.1 194 7.8e-05 16.0 0.0 1 1 1.9e-06 0.00012 15.3 0.0 28 58 98 128 72 174 0.81 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_44 - 61 AAA_25 PF13481.1 194 0.00013 15.2 0.0 1 1 2.1e-06 0.00014 15.2 0.0 36 63 11 38 4 52 0.86 # 30240 # 30422 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_13 - 227 Methyltransf_15 PF09445.5 164 0.0021 11.5 0.0 1 2 0.034 6.7 0.1 0.0 53 79 4 29 2 33 0.91 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 1_13 - 227 Methyltransf_15 PF09445.5 164 0.0021 11.5 0.0 2 2 6.9e-05 0.014 8.8 0.0 3 30 166 193 164 209 0.86 # 10534 # 11214 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.592 3_4 - 261 AAA_28 PF13521.1 163 0.0032 11.3 1.3 1 1 0.0001 0.0098 9.7 0.1 1 27 105 135 105 170 0.71 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 1_97 - 871 AAA_28 PF13521.1 163 0.006 10.4 2.2 1 2 0.018 1.8 2.3 0.0 4 22 224 242 222 298 0.85 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_28 PF13521.1 163 0.006 10.4 2.2 2 2 0.0014 0.13 6.0 0.1 2 23 607 631 606 657 0.80 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_5 PF07728.9 139 4.5e-15 49.4 0.1 1 2 4.5e-05 0.0044 10.6 0.1 3 75 223 301 221 304 0.77 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_97 - 871 AAA_5 PF07728.9 139 4.5e-15 49.4 0.1 2 2 1.3e-12 1.3e-10 35.0 0.0 2 124 607 727 606 741 0.78 # 84971 # 87583 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 3_4 - 261 AAA_5 PF07728.9 139 7.3e-05 16.4 0.2 1 1 7.8e-06 0.00076 13.1 0.1 1 74 105 174 105 182 0.73 # 4442 # 5224 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.557 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/193978f9-9249-45ed-af8f-0d2efe357db6 # Target file: checkm_output/bins/pm1020/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1020/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/193978f9-9249-45ed-af8f-0d2efe357db6 checkm_output/bins/pm1020/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:52:29 2020 # [ok]