# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_21 - 181 AAA_14 PF13173.1 128 7.6e-05 13.4 0.1 1 1 8.2e-06 0.00017 12.2 0.0 4 73 3 70 1 114 0.74 # 10806 # 11348 # 1 # ID=1_21;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 1_4 - 77 CoA_binding_3 PF13727.1 175 0.00025 11.6 4.1 1 1 1.4e-05 0.0003 11.3 4.1 25 78 12 72 4 75 0.44 # 1469 # 1699 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.251 1_21 - 181 Zot PF05707.7 193 8.9e-06 16.0 0.1 1 2 0.018 0.38 0.8 0.0 2 15 3 16 2 19 0.86 # 10806 # 11348 # 1 # ID=1_21;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 1_21 - 181 Zot PF05707.7 193 8.9e-06 16.0 0.1 2 2 2.8e-06 5.9e-05 13.3 0.0 69 161 49 137 16 165 0.74 # 10806 # 11348 # 1 # ID=1_21;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/6f47d1a1-9de2-4834-afbb-09aa2a017653 # Target file: checkm_output/bins/pY11173.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pY11173.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6f47d1a1-9de2-4834-afbb-09aa2a017653 checkm_output/bins/pY11173.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:52:10 2020 # [ok]