# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 308 MTS PF05175.9 170 2e-05 12.4 0.0 1 1 7.1e-06 2.9e-05 11.9 0.0 114 156 28 71 18 78 0.75 # 950 # 1873 # -1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.640 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/aa97b071-2fe7-439a-8c3f-f75487a976a4 # Target file: checkm_output/bins/pX69872.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pX69872.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/aa97b071-2fe7-439a-8c3f-f75487a976a4 checkm_output/bins/pX69872.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:52:08 2020 # [ok]