# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_80 - 238 cobW PF02492.14 178 0.0015 10.8 1.8 1 1 0.0004 0.038 6.2 1.8 10 151 24 157 17 184 0.47 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_80 - 238 MipZ PF09140.6 261 2.6e-18 58.8 0.5 1 1 3.7e-18 3.5e-16 51.8 0.2 2 141 15 134 14 154 0.82 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_86 - 454 UvrD_C_2 PF13538.1 104 1.4e-08 27.7 0.1 1 1 1e-09 9.6e-08 25.0 0.1 49 98 359 444 325 447 0.76 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_42 - 411 AAA_2 PF07724.9 171 6.2e-06 19.0 0.0 1 1 1.2e-07 1.2e-05 18.2 0.0 6 82 163 237 159 280 0.76 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_3 - 612 DUF87 PF01935.12 229 4.6e-08 25.9 0.3 1 1 2.6e-09 1.3e-07 24.5 0.3 13 103 123 205 107 325 0.68 # 2165 # 4000 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.341 1_46 - 779 DUF87 PF01935.12 229 0.005 9.5 10.9 1 1 0.00013 0.0063 9.1 6.1 19 103 369 454 361 617 0.61 # 33985 # 36321 # -1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303 1_42 - 411 AAA_22 PF13401.1 131 4.7e-08 26.1 0.4 1 2 0.00034 0.016 8.2 0.1 4 29 160 185 154 199 0.80 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_42 - 411 AAA_22 PF13401.1 131 4.7e-08 26.1 0.4 2 2 1.3e-06 6.1e-05 16.0 0.1 71 125 201 274 182 281 0.80 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_86 - 454 AAA_22 PF13401.1 131 7.4e-06 19.0 0.3 1 1 3.1e-06 0.00015 14.8 0.3 3 32 19 48 16 207 0.79 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_80 - 238 SRP54 PF00448.17 196 1.1e-06 21.1 1.1 1 1 3.5e-08 3.3e-06 19.5 0.3 11 99 24 107 13 114 0.77 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_80 - 238 KAP_NTPase PF07693.9 325 1.2e-05 17.3 0.2 1 1 1.7e-07 1.6e-05 16.8 0.2 30 177 24 188 10 190 0.82 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_80 - 238 AAA_17 PF13207.1 121 1.8e-05 18.4 0.1 1 2 1.3e-05 0.0006 13.5 0.0 9 77 24 99 23 143 0.58 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_80 - 238 AAA_17 PF13207.1 121 1.8e-05 18.4 0.1 2 2 0.024 1.1 2.9 0.0 45 97 161 225 139 237 0.58 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_42 - 411 AAA_17 PF13207.1 121 7.5e-05 16.4 0.2 1 2 3.8e-05 0.0018 11.9 0.0 2 60 163 235 163 295 0.53 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_42 - 411 AAA_17 PF13207.1 121 7.5e-05 16.4 0.2 2 2 0.066 3.2 1.5 0.1 28 110 327 400 314 405 0.68 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_95 - 2632 Helicase_C PF00271.26 78 3.8e-06 19.6 0.0 1 1 1.4e-07 1.3e-05 17.9 0.0 16 78 2139 2203 2126 2203 0.83 # 63201 # 71096 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 1_80 - 238 ArsA_ATPase PF02374.10 305 7.5e-07 21.2 0.1 1 1 1.4e-08 1.3e-06 20.4 0.1 4 52 17 63 12 153 0.62 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_86 - 454 PhoH PF02562.11 205 2.4e-05 16.5 0.5 1 2 0.0002 0.019 7.0 0.1 6 41 4 42 1 63 0.82 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_86 - 454 PhoH PF02562.11 205 2.4e-05 16.5 0.5 2 2 0.00013 0.012 7.6 0.1 122 169 173 218 168 229 0.77 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_80 - 238 AAA_26 PF13500.1 199 0.00071 12.0 0.5 1 2 0.00024 0.023 7.1 0.0 122 154 4 36 1 47 0.73 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_80 - 238 AAA_26 PF13500.1 199 0.00071 12.0 0.5 2 2 0.00037 0.035 6.5 0.3 3 67 15 70 13 188 0.57 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_42 - 411 Zeta_toxin PF06414.7 201 0.00093 11.1 0.0 1 1 1.6e-05 0.0015 10.4 0.0 9 55 155 198 147 217 0.83 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_80 - 238 VirC1 PF07015.6 231 2.8e-09 29.2 0.0 1 1 4.3e-11 4.1e-09 28.6 0.0 6 184 18 201 13 217 0.77 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_80 - 238 Fer4_NifH PF00142.13 273 0.00028 12.9 0.0 1 1 6.8e-06 0.00065 11.7 0.0 7 43 21 55 16 105 0.81 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_42 - 411 AAA_16 PF13191.1 185 0.00083 12.2 0.0 1 1 1.9e-05 0.0018 11.1 0.0 26 106 162 240 148 266 0.73 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_80 - 238 AAA_18 PF13238.1 129 5.4e-05 16.4 2.9 1 2 1.6e-06 0.00015 14.9 0.1 8 93 24 112 23 138 0.61 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_80 - 238 AAA_18 PF13238.1 129 5.4e-05 16.4 2.9 2 2 0.022 2.1 1.5 0.5 35 74 163 185 128 224 0.49 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_80 - 238 CbiA PF01656.18 195 3.5e-24 78.1 1.0 1 1 6.7e-26 6.4e-24 77.2 0.9 2 173 17 169 16 201 0.73 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_42 - 411 AAA_14 PF13173.1 128 2.8e-07 23.3 0.3 1 1 9e-09 8.6e-07 21.8 0.0 4 74 162 241 159 307 0.73 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_42 - 411 AAA PF00004.24 132 2.9e-17 55.9 0.0 1 1 5.3e-19 5e-17 55.2 0.0 2 131 164 300 163 301 0.88 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_86 - 454 UvrD_C PF13361.1 351 3.6e-18 58.9 7.6 1 3 0.0012 0.11 4.6 1.1 139 230 61 158 36 198 0.72 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_86 - 454 UvrD_C PF13361.1 351 3.6e-18 58.9 7.6 2 3 8.1e-07 7.7e-05 15.0 0.4 2 35 227 259 226 298 0.66 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_86 - 454 UvrD_C PF13361.1 351 3.6e-18 58.9 7.6 3 3 9.1e-15 8.7e-13 41.2 0.0 277 344 368 447 327 448 0.77 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_3 - 612 PAPS_reduct PF01507.14 174 0.00011 14.9 0.1 1 1 2.7e-06 0.00026 13.7 0.1 11 72 454 522 452 568 0.79 # 2165 # 4000 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.341 1_3 - 612 TraG-D_C PF12696.2 128 2.6e-13 42.8 0.1 1 1 1.3e-14 6.4e-13 41.6 0.0 2 127 420 541 419 542 0.82 # 2165 # 4000 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.341 1_46 - 779 TraG-D_C PF12696.2 128 0.00048 12.9 0.0 1 1 2.3e-05 0.0011 11.7 0.0 3 78 657 730 655 739 0.73 # 33985 # 36321 # -1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303 1_80 - 238 AAA_31 PF13614.1 157 3.1e-08 26.5 0.4 1 2 1.7e-09 1.6e-07 24.2 0.0 6 53 19 65 14 109 0.79 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_80 - 238 AAA_31 PF13614.1 157 3.1e-08 26.5 0.4 2 2 0.091 8.7 -0.9 0.0 119 151 93 124 85 130 0.74 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_42 - 411 AAA_33 PF13671.1 143 9.9e-05 15.1 0.0 1 1 3.9e-06 0.00019 14.2 0.0 2 79 163 287 163 312 0.73 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_80 - 238 AAA_33 PF13671.1 143 0.00059 12.6 0.0 1 1 3.5e-05 0.0016 11.1 0.0 9 86 24 108 22 116 0.68 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_95 - 2632 Methyltransf_26 PF13659.1 117 2e-14 46.5 0.0 1 1 4.4e-16 4.1e-14 45.5 0.0 3 116 829 935 827 936 0.89 # 63201 # 71096 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 1_86 - 454 AAA_30 PF13604.1 196 1e-07 24.5 0.0 1 2 1.4e-07 1.4e-05 17.6 0.0 2 84 3 86 2 100 0.74 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_86 - 454 AAA_30 PF13604.1 196 1e-07 24.5 0.0 2 2 0.0013 0.12 4.7 0.0 86 161 163 234 150 266 0.69 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_3 - 612 FtsK_SpoIIIE PF01580.13 205 0.00081 11.7 0.0 1 1 1.6e-05 0.0016 10.8 0.0 25 82 118 173 103 177 0.82 # 2165 # 4000 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.341 1_95 - 2632 Eco57I PF07669.6 106 1.1e-13 44.3 3.5 1 3 0.035 3.4 1.0 0.1 9 45 486 520 485 525 0.85 # 63201 # 71096 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 1_95 - 2632 Eco57I PF07669.6 106 1.1e-13 44.3 3.5 2 3 5.5e-13 5.3e-11 35.7 0.0 2 102 885 982 883 986 0.78 # 63201 # 71096 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 1_95 - 2632 Eco57I PF07669.6 106 1.1e-13 44.3 3.5 3 3 0.011 1 2.7 0.1 28 71 1110 1151 1071 1172 0.75 # 63201 # 71096 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 1_26 - 316 GLF PF03275.8 204 0.00042 12.7 5.2 1 2 0.061 5.8 -0.9 0.1 134 148 77 91 37 127 0.69 # 16837 # 17784 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.290 1_26 - 316 GLF PF03275.8 204 0.00042 12.7 5.2 2 2 1.7e-06 0.00016 14.0 1.2 78 146 228 301 195 312 0.83 # 16837 # 17784 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.290 1_42 - 411 RuvB_N PF05496.7 234 0.00023 13.0 0.0 1 1 4.4e-06 0.00042 12.2 0.0 20 109 131 223 113 240 0.71 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_86 - 454 AAA_19 PF13245.1 76 3.8e-06 19.5 0.0 1 1 1.5e-07 7.1e-06 18.6 0.0 11 75 21 78 10 79 0.84 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_80 - 238 AAA_19 PF13245.1 76 0.00047 12.8 0.0 1 1 2.1e-05 0.00098 11.8 0.0 20 37 24 41 22 56 0.87 # 52521 # 53234 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_46 - 779 AAA_10 PF12846.2 304 7.4e-32 103.7 1.6 1 1 2.4e-33 1.2e-31 103.1 1.6 1 297 373 726 373 735 0.78 # 33985 # 36321 # -1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303 1_3 - 612 AAA_10 PF12846.2 304 2.3e-20 66.0 0.0 1 1 6.7e-22 3.2e-20 65.5 0.0 2 287 133 484 132 498 0.81 # 2165 # 4000 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.341 1_86 - 454 ResIII PF04851.10 184 2.1e-07 23.7 2.1 1 1 2.2e-09 2.1e-07 23.7 2.1 22 155 17 179 1 229 0.69 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_86 - 454 Viral_helicase1 PF01443.13 234 1.1e-11 37.6 1.2 1 3 2.1e-06 0.0002 13.7 0.0 3 53 25 78 23 92 0.75 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_86 - 454 Viral_helicase1 PF01443.13 234 1.1e-11 37.6 1.2 2 3 1.5e-07 1.4e-05 17.5 0.3 16 173 121 276 118 293 0.74 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_86 - 454 Viral_helicase1 PF01443.13 234 1.1e-11 37.6 1.2 3 3 0.0036 0.34 3.1 0.0 214 227 431 444 370 448 0.79 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_95 - 2632 DEAD PF00270.24 169 4.4e-06 19.1 2.1 1 2 1.5e-07 1.4e-05 17.5 0.1 7 105 1593 1683 1586 1737 0.71 # 63201 # 71096 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 1_95 - 2632 DEAD PF00270.24 169 4.4e-06 19.1 2.1 2 2 0.063 6 -0.9 0.1 120 134 1776 1790 1709 1827 0.69 # 63201 # 71096 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 1_42 - 411 DUF815 PF05673.8 250 1.4e-06 20.2 0.0 1 1 2.3e-08 2.2e-06 19.6 0.0 24 116 131 232 117 275 0.85 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 1_3 - 612 DUF853 PF05872.7 504 3e-05 15.3 0.0 1 1 4.8e-07 4.6e-05 14.7 0.0 4 59 115 170 112 193 0.91 # 2165 # 4000 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.341 1_3 - 612 TrwB_AAD_bind PF10412.4 386 3.1e-13 41.9 0.1 1 3 6.8e-09 6.5e-07 21.0 0.0 9 54 126 171 119 198 0.90 # 2165 # 4000 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.341 1_3 - 612 TrwB_AAD_bind PF10412.4 386 3.1e-13 41.9 0.1 2 3 0.049 4.7 -1.5 0.0 104 154 226 276 217 300 0.70 # 2165 # 4000 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.341 1_3 - 612 TrwB_AAD_bind PF10412.4 386 3.1e-13 41.9 0.1 3 3 8.8e-08 8.3e-06 17.4 0.0 216 377 392 552 366 558 0.78 # 2165 # 4000 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.341 1_86 - 454 UvrD-helicase PF00580.16 315 3e-11 35.9 22.7 1 4 8.2e-05 0.0078 8.3 0.1 13 32 20 39 8 46 0.77 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_86 - 454 UvrD-helicase PF00580.16 315 3e-11 35.9 22.7 2 4 0.00053 0.05 5.6 0.2 85 140 63 118 51 130 0.78 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_86 - 454 UvrD-helicase PF00580.16 315 3e-11 35.9 22.7 3 4 8.9e-12 8.5e-10 31.2 2.9 206 301 106 212 101 225 0.74 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_86 - 454 UvrD-helicase PF00580.16 315 3e-11 35.9 22.7 4 4 0.0096 0.91 1.5 4.9 106 209 326 433 255 446 0.71 # 57342 # 58703 # 1 # ID=1_86;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_95 - 2632 SNF2_N PF00176.18 299 5.9e-19 60.7 0.2 1 1 2.6e-20 2.5e-18 58.7 0.2 22 205 1596 1872 1567 1940 0.78 # 63201 # 71096 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.321 1_42 - 411 AAA_5 PF07728.9 139 5.4e-08 25.5 0.0 1 1 1.4e-09 1.3e-07 24.3 0.0 2 123 163 276 162 290 0.74 # 30552 # 31784 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/db5a592b-0e9a-4735-a1da-637ce22436cc # Target file: checkm_output/bins/pNZ_CP020479.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_CP020479.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/db5a592b-0e9a-4735-a1da-637ce22436cc checkm_output/bins/pNZ_CP020479.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:51:51 2020 # [ok]