# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_48 - 223 MipZ PF09140.6 261 3.8e-16 50.8 0.1 1 1 1.3e-16 6.2e-15 46.8 0.1 2 140 3 125 2 148 0.79 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_48 - 223 YhjQ PF06564.7 244 3.2e-08 25.1 0.0 1 2 4.2e-09 2.1e-07 22.4 0.0 1 49 1 49 1 59 0.84 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_48 - 223 YhjQ PF06564.7 244 3.2e-08 25.1 0.0 2 2 0.022 1.1 0.4 0.0 103 145 68 111 53 123 0.73 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_10 - 153 SSB PF00436.20 104 1e-26 84.8 0.0 1 1 2.7e-28 1.3e-26 84.4 0.0 1 103 1 103 1 104 0.99 # 3895 # 4353 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 1_26 - 823 DUF87 PF01935.12 229 0.001 10.8 19.8 1 1 3.4e-05 0.0017 10.1 7.0 25 212 468 628 465 647 0.55 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_20 - 317 Septin PF00735.13 281 0.00011 13.2 1.2 1 2 0.063 3.1 -1.4 0.1 77 117 35 75 33 78 0.80 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 Septin PF00735.13 281 0.00011 13.2 1.2 2 2 3.5e-06 0.00017 12.5 0.1 6 55 144 199 140 214 0.63 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 823 AAA_22 PF13401.1 131 9.3e-06 17.7 0.0 1 1 5.7e-06 0.00014 13.9 0.0 4 31 466 493 463 585 0.71 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_20 - 317 AAA_22 PF13401.1 131 0.00021 13.4 0.1 1 1 5.3e-05 0.0013 10.8 0.1 3 30 141 168 137 287 0.86 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_48 - 223 SRP54 PF00448.17 196 3.7e-08 24.9 0.0 1 1 1.6e-09 8e-08 23.8 0.0 11 133 12 135 10 152 0.73 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_26 - 823 AAA_17 PF13207.1 121 4.8e-08 25.8 0.1 1 1 2.2e-08 5.5e-07 22.4 0.1 4 67 471 553 470 610 0.60 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_20 - 317 AAA_17 PF13207.1 121 6e-05 15.8 0.2 1 2 0.077 1.9 1.3 0.0 28 79 18 73 9 121 0.57 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 AAA_17 PF13207.1 121 6e-05 15.8 0.2 2 2 2.7e-05 0.00066 12.4 0.0 2 32 145 177 144 294 0.76 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 Miro PF08477.8 119 1e-06 21.1 0.0 1 1 3.8e-08 1.9e-06 20.3 0.0 2 48 145 188 144 233 0.69 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_48 - 223 ArsA_ATPase PF02374.10 305 2.3e-09 28.6 0.0 1 1 8.7e-11 4.3e-09 27.7 0.0 8 46 9 47 1 91 0.88 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_20 - 317 T2SE PF00437.15 272 2.2e-50 162.9 0.0 1 1 5.6e-52 2.7e-50 162.6 0.0 11 271 19 293 11 294 0.90 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_28 - 102 TIGR00810 TIGR00810 73 0.011 7.4 13.5 1 1 9.2e-06 0.00045 11.9 7.7 6 73 4 72 2 72 0.93 # 20141 # 20446 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.297 1_20 - 317 Zeta_toxin PF06414.7 201 3.6e-06 18.1 0.0 1 1 1.4e-07 6.7e-06 17.2 0.0 14 49 140 176 130 203 0.89 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_48 - 223 VirC1 PF07015.6 231 1.9e-11 35.3 0.0 1 1 4.7e-13 2.3e-11 35.1 0.0 1 149 1 148 1 199 0.86 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_48 - 223 Fer4_NifH PF00142.13 273 1.1e-06 19.9 0.0 1 1 4.9e-08 2.4e-06 18.7 0.0 7 40 9 42 3 58 0.89 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_20 - 317 Arch_ATPase PF01637.13 234 0.00015 13.4 0.1 1 1 4.5e-06 0.00022 12.8 0.1 10 73 134 197 132 263 0.78 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 AAA_16 PF13191.1 185 9.1e-05 14.4 0.0 1 1 2.8e-06 0.00014 13.8 0.0 24 51 142 169 125 213 0.86 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_48 - 223 AAA_23 PF13476.1 202 8.4e-06 18.1 2.9 1 1 5.2e-07 1.3e-05 17.5 2.9 29 124 12 168 10 222 0.44 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_20 - 317 AAA_23 PF13476.1 202 0.0016 10.7 5.6 1 1 0.00019 0.0046 9.2 5.6 17 39 138 162 124 315 0.89 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 AAA_18 PF13238.1 129 2.3e-05 16.6 0.1 1 1 3.7e-06 9.2e-05 14.7 0.0 1 63 145 211 145 230 0.82 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 823 AAA_18 PF13238.1 129 0.00045 12.4 0.1 1 1 1.9e-05 0.00045 12.4 0.1 2 34 470 505 470 580 0.71 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_48 - 223 CbiA PF01656.18 195 5.8e-25 79.7 0.1 1 1 1.5e-26 7.6e-25 79.3 0.1 1 173 4 163 4 189 0.75 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_20 - 317 IIGP PF05049.8 376 2.3e-05 15.2 0.0 1 2 2.2e-06 0.00011 13.0 0.0 26 56 133 163 126 170 0.88 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 IIGP PF05049.8 376 2.3e-05 15.2 0.0 2 2 0.031 1.5 -0.7 0.0 103 124 272 293 264 298 0.79 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 AAA_14 PF13173.1 128 5.5e-05 15.0 0.0 1 1 2.2e-06 0.00011 14.1 0.0 1 70 141 223 141 256 0.64 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 AAA_29 PF13555.1 62 1.4e-05 16.5 0.1 1 1 1.2e-06 2.9e-05 15.5 0.1 19 43 139 162 129 178 0.79 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 823 AAA_29 PF13555.1 62 0.00023 12.6 0.0 1 1 2e-05 0.0005 11.5 0.0 21 39 465 482 453 491 0.83 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_20 - 317 Sigma54_activat PF00158.21 168 8.9e-05 13.9 0.0 1 1 3e-06 0.00015 13.2 0.0 11 46 131 166 122 184 0.83 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 DUF258 PF03193.11 161 6e-06 17.4 0.0 1 1 2.1e-07 1e-05 16.6 0.0 22 61 128 168 112 193 0.80 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_18 - 635 TraG-D_C PF12696.2 128 5.9e-28 89.2 0.0 1 1 1.2e-29 5.9e-28 89.2 0.0 2 125 420 536 419 539 0.89 # 10925 # 12829 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.290 1_48 - 223 AAA_31 PF13614.1 157 5.9e-09 27.9 0.0 1 2 1.2e-08 5.8e-07 21.5 0.0 2 66 3 80 2 83 0.75 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_48 - 223 AAA_31 PF13614.1 157 5.9e-09 27.9 0.0 2 2 0.0014 0.071 4.9 0.0 116 152 79 117 71 121 0.79 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_20 - 317 FtsK_SpoIIIE PF01580.13 205 3.2e-07 21.9 0.1 1 1 2.8e-08 6.7e-07 20.8 0.1 34 59 137 163 129 168 0.88 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 823 FtsK_SpoIIIE PF01580.13 205 8.6e-07 20.5 0.0 1 1 9.1e-08 2.2e-06 19.1 0.0 31 64 457 492 432 496 0.82 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_20 - 317 Dynamin_N PF00350.18 168 2.4e-05 16.1 0.0 1 1 1.3e-06 6.3e-05 14.7 0.0 1 41 145 184 145 218 0.67 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 ABC_tran PF00005.22 137 1.2e-07 24.0 0.1 1 1 6.9e-09 1.7e-07 23.5 0.1 8 70 139 200 132 277 0.72 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 823 ABC_tran PF00005.22 137 0.00016 13.9 0.3 1 2 0.065 1.6 1.0 0.2 56 118 119 200 83 222 0.62 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_26 - 823 ABC_tran PF00005.22 137 0.00016 13.9 0.3 2 2 6.4e-06 0.00016 13.9 0.3 11 36 466 491 463 638 0.76 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_26 - 823 AAA_10 PF12846.2 304 8.3e-35 112.5 2.0 1 1 5.1e-36 8.3e-35 112.5 2.0 1 304 466 742 466 742 0.90 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_18 - 635 AAA_10 PF12846.2 304 9.4e-09 26.9 2.7 1 1 1.2e-09 2e-08 25.8 2.7 4 299 138 497 136 499 0.66 # 10925 # 12829 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.290 1_20 - 317 AAA_10 PF12846.2 304 3.9e-05 15.0 0.4 1 1 4e-06 6.6e-05 14.3 0.4 2 37 143 178 142 311 0.67 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 ResIII PF04851.10 184 0.00018 13.3 0.0 1 1 5.5e-06 0.00027 12.7 0.0 22 70 134 189 88 229 0.79 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_17 - 384 Zot PF05707.7 193 3.5e-06 18.5 0.4 1 2 0.027 1.3 0.3 0.0 35 114 4 96 2 111 0.56 # 9745 # 10896 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.225 1_17 - 384 Zot PF05707.7 193 3.5e-06 18.5 0.4 2 2 3.9e-07 1.9e-05 16.1 0.1 82 163 159 241 113 270 0.73 # 9745 # 10896 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.225 1_19 - 136 RRF PF01765.14 165 3.9e-05 15.0 4.1 1 1 1.1e-06 5.3e-05 14.6 4.1 63 129 60 128 9 135 0.84 # 12826 # 13233 # -1 # ID=1_19;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 1_20 - 317 DUF2075 PF09848.4 352 1.7e-05 15.7 0.0 1 1 4.8e-07 2.3e-05 15.3 0.0 1 51 142 207 142 240 0.67 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 823 PduV-EutP PF10662.4 143 6.3e-05 14.4 0.0 1 1 3.9e-06 0.00019 12.8 0.0 3 28 468 493 466 518 0.89 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_20 - 317 DEAD PF00270.24 169 4.3e-05 14.9 0.0 1 1 1.5e-06 7.5e-05 14.2 0.0 8 32 135 160 131 215 0.72 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_18 - 635 TrwB_AAD_bind PF10412.4 386 3.3e-30 96.8 0.0 1 2 3.5e-06 5.8e-05 13.7 0.0 16 148 136 282 122 291 0.77 # 10925 # 12829 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.290 1_18 - 635 TrwB_AAD_bind PF10412.4 386 3.3e-30 96.8 0.0 2 2 1.3e-26 2.1e-25 81.0 0.1 141 343 315 516 298 551 0.82 # 10925 # 12829 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.290 1_26 - 823 TrwB_AAD_bind PF10412.4 386 2.8e-12 37.7 0.2 1 2 1.6e-05 0.00025 11.6 0.1 15 38 466 489 461 516 0.89 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_26 - 823 TrwB_AAD_bind PF10412.4 386 2.8e-12 37.7 0.2 2 2 3.5e-09 5.8e-08 23.6 0.0 222 363 635 775 625 793 0.73 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_20 - 317 TrwB_AAD_bind PF10412.4 386 8.3e-06 16.4 0.0 1 1 7.9e-07 1.3e-05 15.8 0.0 14 51 141 178 137 189 0.85 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 Sigma54_activ_2 PF14532.1 138 6.3e-05 15.0 0.0 1 1 2.2e-06 0.00011 14.2 0.0 12 60 133 181 131 195 0.88 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_18 - 635 T4SS-DNA_transf PF02534.9 469 4.8e-75 244.7 5.8 1 1 6.6e-76 1.6e-74 243.0 5.5 46 453 137 568 94 589 0.82 # 10925 # 12829 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.290 1_17 - 384 T4SS-DNA_transf PF02534.9 469 5.5e-24 76.4 8.6 1 1 3.9e-24 9.5e-23 72.3 8.6 4 294 4 288 1 293 0.73 # 9745 # 10896 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.225 1_48 - 223 ArgK PF03308.11 267 0.0002 12.0 0.0 1 1 7.8e-06 0.00038 11.1 0.0 39 69 12 42 6 50 0.92 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_20 - 317 Pox_A32 PF04665.7 241 3.8e-05 14.9 0.0 1 1 1.3e-06 6.5e-05 14.2 0.0 7 37 136 166 131 189 0.88 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_48 - 223 RNA_helicase PF00910.17 107 0.00028 13.0 0.6 1 2 0.00025 0.012 7.7 0.0 6 30 9 31 4 89 0.75 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_48 - 223 RNA_helicase PF00910.17 107 0.00028 13.0 0.6 2 2 0.0061 0.3 3.3 0.0 62 84 133 156 116 168 0.75 # 35513 # 36181 # -1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.254 1_20 - 317 UPF0079 PF02367.12 123 0.00029 12.4 0.0 1 1 1.2e-05 0.0006 11.4 0.0 8 45 135 172 131 175 0.83 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 823 NACHT PF05729.7 166 0.00014 13.4 0.6 1 2 0.024 0.59 1.7 0.0 13 48 134 166 134 242 0.78 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_26 - 823 NACHT PF05729.7 166 0.00014 13.4 0.6 2 2 0.00018 0.0043 8.6 0.0 4 24 470 490 468 497 0.85 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_20 - 317 NACHT PF05729.7 166 0.00025 12.6 0.0 1 1 1.9e-05 0.00045 11.8 0.0 3 24 145 166 143 171 0.89 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 823 AAA_25 PF13481.1 194 6.7e-05 14.2 0.0 1 1 1.2e-05 0.00019 12.7 0.0 27 57 461 490 444 507 0.81 # 17421 # 19889 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_45 - 370 AAA_25 PF13481.1 194 6.9e-05 14.2 0.1 1 1 4.2e-06 6.9e-05 14.2 0.1 106 177 224 304 138 307 0.83 # 31708 # 32817 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.260 1_20 - 317 AAA_25 PF13481.1 194 0.00026 12.3 0.0 1 1 2.2e-05 0.00036 11.8 0.0 26 83 135 189 113 258 0.83 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_20 - 317 AAA_28 PF13521.1 163 1.4e-05 17.0 0.0 1 1 6e-07 3e-05 15.9 0.0 2 94 145 237 144 259 0.68 # 13243 # 14193 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/60bd7edf-0524-489e-a5b3-ea8b6186113f # Target file: checkm_output/bins/pNZ_CP014746.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_CP014746.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/60bd7edf-0524-489e-a5b3-ea8b6186113f checkm_output/bins/pNZ_CP014746.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:51:37 2020 # [ok]