# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_2 - 578 Terminase_6 PF03237.10 384 1.9e-37 121.1 0.2 1 1 4.5e-39 2.7e-37 120.5 0.2 2 382 181 561 180 562 0.91 # 1205 # 2938 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.386 1_13 - 109 F420_oxidored PF03807.12 96 4.4e-05 16.1 0.2 1 1 1.1e-06 6.3e-05 15.6 0.2 19 81 43 104 36 108 0.81 # 6425 # 6751 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.229 1_27 - 209 Ribosomal_S13 PF00416.17 107 0.04 6.6 7.3 1 2 0.00034 0.021 7.5 1.7 36 80 81 121 69 126 0.75 # 15975 # 16601 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.247 1_27 - 209 Ribosomal_S13 PF00416.17 107 0.04 6.6 7.3 2 2 0.024 1.5 1.6 0.3 38 60 177 199 159 208 0.71 # 15975 # 16601 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.247 1_29 - 782 FtsK_SpoIIIE PF01580.13 205 0.00018 13.2 0.1 1 1 7.8e-06 0.00047 11.8 0.0 34 62 368 396 355 399 0.89 # 17172 # 19517 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_29 - 782 AAA_10 PF12846.2 304 5.5e-30 96.9 1.0 1 1 1.6e-31 9.6e-30 96.1 1.0 1 294 372 725 372 734 0.86 # 17172 # 19517 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_29 - 782 Zot PF05707.7 193 1.3e-05 16.9 1.0 1 2 0.044 2.6 -0.4 0.0 4 16 376 388 375 397 0.83 # 17172 # 19517 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_29 - 782 Zot PF05707.7 193 1.3e-05 16.9 1.0 2 2 1.6e-06 9.3e-05 14.1 0.2 80 136 656 709 587 758 0.84 # 17172 # 19517 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_8 - 254 MethyltransfD12 PF02086.10 260 4.3e-31 100.4 4.0 1 1 1.2e-32 7.5e-31 99.6 4.0 1 259 12 236 12 237 0.80 # 3073 # 3834 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.361 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/04b38d78-ee17-4d5f-a910-5326bb0b553d # Target file: checkm_output/bins/pNZ_CP014569.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_CP014569.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/04b38d78-ee17-4d5f-a910-5326bb0b553d checkm_output/bins/pNZ_CP014569.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:51:34 2020 # [ok]