# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 67 tRNA_lig_kinase PF08303.6 168 4e-06 14.7 0.5 1 1 1.4e-06 4.3e-06 14.6 0.5 66 121 9 65 2 66 0.87 # 1670 # 1870 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.224 1_1 - 478 Semialdhyde_dh PF01118.19 121 1.5e-05 13.3 2.6 1 1 6e-06 1.8e-05 13.0 0.4 19 90 251 322 244 328 0.72 # 253 # 1686 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.304 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3bdb4ac8-751a-478a-9399-08a05929b56e # Target file: checkm_output/bins/pNZ_CP007768.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_CP007768.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3bdb4ac8-751a-478a-9399-08a05929b56e checkm_output/bins/pNZ_CP007768.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:51:25 2020 # [ok]