# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_52 - 598 IstB_IS21 PF01695.12 178 3.3e-06 18.7 0.1 1 2 1.5e-06 8.3e-05 14.2 0.0 46 85 32 71 27 86 0.90 # 40779 # 42572 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.270 1_52 - 598 IstB_IS21 PF01695.12 178 3.3e-06 18.7 0.1 2 2 0.013 0.74 1.3 0.0 98 140 110 160 98 187 0.71 # 40779 # 42572 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.270 1_24 - 640 AIG1 PF04548.11 212 0.00016 12.9 0.0 1 1 6.6e-06 0.00038 11.7 0.0 32 62 51 81 43 108 0.84 # 17306 # 19225 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.406 1_4 - 142 SSB PF00436.20 104 3.1e-28 89.9 0.2 1 1 7.1e-30 4e-28 89.5 0.2 1 102 1 102 1 104 0.98 # 1715 # 2140 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_12 - 331 DUF87 PF01935.12 229 6.3e-05 15.0 0.1 1 1 2.2e-06 0.00013 14.0 0.1 28 48 165 185 157 193 0.84 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 Septin PF00735.13 281 4.2e-05 14.7 0.0 1 1 2.3e-06 6.7e-05 14.1 0.0 6 29 162 185 158 209 0.80 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_24 - 640 Septin PF00735.13 281 0.00016 12.9 0.1 1 1 9.7e-06 0.00028 12.0 0.1 7 77 6 82 3 91 0.68 # 17306 # 19225 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.406 1_12 - 331 AAA_22 PF13401.1 131 1.1e-05 17.7 0.0 1 1 3.9e-07 2.2e-05 16.7 0.0 4 41 160 208 156 256 0.70 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 ATP_bind_1 PF03029.12 238 0.00013 13.6 0.0 1 1 3.7e-06 0.00021 13.0 0.0 1 23 165 187 165 193 0.87 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 PRK PF00485.13 194 0.00035 12.3 0.0 1 1 1.2e-05 0.00066 11.4 0.0 2 24 163 185 162 221 0.83 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 AAA_17 PF13207.1 121 5.1e-06 19.5 0.1 1 1 2.2e-07 1.3e-05 18.2 0.1 2 49 163 207 162 303 0.82 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_43 - 94 AAA_21 PF13304.1 303 0.0027 9.7 10.7 1 1 5.6e-05 0.0032 9.5 10.7 80 162 6 88 2 92 0.93 # 36128 # 36409 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.209 1_24 - 640 Miro PF08477.8 119 1.1e-05 18.0 0.0 1 1 4.4e-07 2.5e-05 16.9 0.0 9 119 13 131 5 131 0.75 # 17306 # 19225 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.406 1_12 - 331 MobB PF03205.9 140 3.4e-05 15.7 0.6 1 2 2.2e-06 0.00013 13.8 0.0 3 27 163 187 161 199 0.81 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 MobB PF03205.9 140 3.4e-05 15.7 0.6 2 2 0.074 4.2 -0.8 0.1 20 44 296 320 294 321 0.80 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_39 - 1213 Helicase_C PF00271.26 78 5.5e-08 24.8 0.3 1 2 0.033 1.9 0.6 0.0 14 40 359 385 345 387 0.84 # 29605 # 33243 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_39 - 1213 Helicase_C PF00271.26 78 5.5e-08 24.8 0.3 2 2 2.4e-08 1.4e-06 20.3 0.0 12 78 796 864 789 864 0.86 # 29605 # 33243 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_12 - 331 T2SE PF00437.15 272 1.9e-63 206.0 0.0 1 1 3.8e-65 2.1e-63 205.8 0.0 5 269 13 312 9 315 0.94 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 Zeta_toxin PF06414.7 201 7.1e-05 14.1 0.0 1 1 2e-06 0.00012 13.4 0.0 17 49 161 194 146 218 0.85 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 Arch_ATPase PF01637.13 234 0.00015 13.6 0.0 1 1 4.1e-06 0.00023 13.0 0.0 23 81 163 225 151 273 0.83 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 AAA_16 PF13191.1 185 2.7e-05 16.3 0.0 1 1 6.4e-07 3.7e-05 15.9 0.0 24 81 160 234 144 305 0.76 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 AAA_23 PF13476.1 202 0.0022 10.4 6.5 1 2 0.09 5.1 -0.6 0.3 106 106 110 110 7 158 0.50 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 AAA_23 PF13476.1 202 0.0022 10.4 6.5 2 2 8.7e-06 0.0005 12.5 1.5 22 37 163 178 160 184 0.89 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_25 - 153 AAA_18 PF13238.1 129 2.9e-08 26.2 0.0 1 1 1.4e-09 4e-08 25.8 0.0 47 120 27 104 4 117 0.78 # 19959 # 20417 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.394 1_12 - 331 AAA_18 PF13238.1 129 0.00017 14.1 1.3 1 1 9.9e-06 0.00028 13.3 0.0 1 18 163 180 163 227 0.76 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_36 - 187 CbiA PF01656.18 195 2.1e-08 25.9 0.1 1 2 6.4e-07 3.7e-05 15.3 0.0 1 24 3 26 3 32 0.92 # 26571 # 27131 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_36 - 187 CbiA PF01656.18 195 2.1e-08 25.9 0.1 2 2 5.1e-05 0.0029 9.1 0.0 95 178 54 131 29 151 0.68 # 26571 # 27131 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_52 - 598 KaiC PF06745.8 227 7.4e-05 14.0 0.0 1 2 8.5e-06 0.00049 11.3 0.0 16 70 30 83 23 186 0.86 # 40779 # 42572 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.270 1_52 - 598 KaiC PF06745.8 227 7.4e-05 14.0 0.0 2 2 0.058 3.3 -1.2 0.0 130 156 326 352 316 358 0.83 # 40779 # 42572 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.270 1_12 - 331 AAA_14 PF13173.1 128 2.8e-05 16.2 0.1 1 1 2.2e-06 0.00013 14.0 0.0 2 54 160 211 159 254 0.75 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 GvpD PF07088.6 484 0.00027 11.4 0.0 1 1 6.1e-06 0.00035 11.0 0.0 8 42 158 192 150 258 0.83 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_24 - 640 TIGR03594 TIGR03594 432 3.4e-08 24.6 0.3 1 3 0.044 2.5 -1.3 0.0 176 211 4 42 2 50 0.74 # 17306 # 19225 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.406 1_24 - 640 TIGR03594 TIGR03594 432 3.4e-08 24.6 0.3 2 3 2e-08 1.1e-06 19.6 0.1 31 123 51 135 47 154 0.87 # 17306 # 19225 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.406 1_24 - 640 TIGR03594 TIGR03594 432 3.4e-08 24.6 0.3 3 3 0.006 0.34 1.5 0.0 304 347 196 239 187 265 0.79 # 17306 # 19225 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.406 1_12 - 331 AAA_29 PF13555.1 62 2.6e-05 15.8 0.0 1 1 1.1e-06 6.2e-05 14.6 0.0 22 40 159 177 142 184 0.85 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_52 - 598 AAA PF00004.24 132 5.9e-05 15.4 0.1 1 2 2.5e-05 0.0014 10.9 0.0 2 105 37 166 36 177 0.66 # 40779 # 42572 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.270 1_52 - 598 AAA PF00004.24 132 5.9e-05 15.4 0.1 2 2 0.025 1.4 1.2 0.0 47 74 411 434 377 459 0.70 # 40779 # 42572 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.270 1_12 - 331 Sigma54_activat PF00158.21 168 5.7e-05 14.8 0.0 1 1 2.1e-06 0.00012 13.7 0.0 11 43 149 181 142 198 0.84 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_24 - 640 MMR_HSR1 PF01926.18 116 2.6e-08 26.0 0.1 1 1 8.6e-10 4.9e-08 25.1 0.1 4 116 8 129 5 129 0.68 # 17306 # 19225 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.406 1_14 - 503 TraG-D_C PF12696.2 128 1e-28 91.9 0.0 1 1 2.7e-29 7.7e-28 89.1 0.0 2 127 305 427 304 428 0.89 # 8570 # 10078 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_1 - 150 TraG-D_C PF12696.2 128 0.00015 13.7 0.0 1 1 8.6e-06 0.00025 13.1 0.0 16 75 9 64 4 81 0.81 # 2 # 451 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.278 1_12 - 331 NTPase_1 PF03266.10 168 0.00039 12.2 0.1 1 1 1.3e-05 0.00076 11.3 0.1 1 23 162 184 162 192 0.88 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_25 - 153 AAA_33 PF13671.1 143 8.4e-08 24.3 0.0 1 1 2.1e-09 1.2e-07 23.8 0.0 46 127 26 106 3 117 0.76 # 19959 # 20417 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.394 1_52 - 598 DnaB_C PF03796.10 259 9.3e-06 16.7 0.0 1 2 6.8e-07 3.9e-05 14.7 0.0 13 117 27 136 23 156 0.79 # 40779 # 42572 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.270 1_52 - 598 DnaB_C PF03796.10 259 9.3e-06 16.7 0.0 2 2 0.011 0.63 0.9 0.0 129 185 119 177 100 179 0.77 # 40779 # 42572 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.270 1_38 - 678 Methyltransf_26 PF13659.1 117 1.3e-13 43.1 0.0 1 1 4.3e-15 2.5e-13 42.3 0.0 3 116 250 360 248 361 0.84 # 27630 # 29663 # 1 # ID=1_38;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.298 1_12 - 331 FtsK_SpoIIIE PF01580.13 205 9.1e-08 23.9 0.0 1 1 5.4e-09 1.5e-07 23.1 0.0 39 59 157 181 132 187 0.81 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_57 - 763 FtsK_SpoIIIE PF01580.13 205 0.00061 11.4 0.0 1 1 4.5e-05 0.0013 10.3 0.0 39 63 535 570 513 576 0.74 # 44444 # 46732 # 1 # ID=1_57;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.294 1_38 - 678 MTS PF05175.9 170 9.4e-06 17.2 0.0 1 1 3.5e-07 2e-05 16.1 0.0 31 142 247 361 240 381 0.76 # 27630 # 29663 # 1 # ID=1_38;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.298 1_29 - 267 VirE PF05272.6 198 0.00036 12.1 0.1 1 1 1.1e-05 0.00063 11.3 0.1 44 117 122 197 96 198 0.81 # 23179 # 23979 # 1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.483 1_12 - 331 ABC_tran PF00005.22 137 1.9e-07 23.6 0.0 1 1 6.9e-09 3.9e-07 22.6 0.0 4 50 153 200 151 226 0.84 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_38 - 678 Eco57I PF07669.6 106 3.1e-09 29.3 1.2 1 1 3.2e-10 1.8e-08 26.8 0.3 3 104 310 411 308 413 0.83 # 27630 # 29663 # 1 # ID=1_38;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.298 1_57 - 763 AAA_10 PF12846.2 304 1.3e-18 59.5 1.4 1 1 3e-19 4.3e-18 57.8 0.3 2 188 546 734 545 760 0.78 # 44444 # 46732 # 1 # ID=1_57;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.294 1_1 - 150 AAA_10 PF12846.2 304 4e-12 38.2 0.0 1 1 3.8e-13 5.5e-12 37.8 0.0 238 301 7 70 1 73 0.90 # 2 # 451 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.278 1_12 - 331 AAA_10 PF12846.2 304 3.2e-06 18.8 0.0 1 1 2.7e-07 3.9e-06 18.6 0.0 2 37 161 196 160 323 0.79 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_14 - 503 AAA_10 PF12846.2 304 2.2e-05 16.1 0.0 1 1 2.3e-06 3.3e-05 15.5 0.0 25 302 46 389 25 390 0.71 # 8570 # 10078 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_39 - 1213 ResIII PF04851.10 184 1.5e-10 33.3 9.7 1 1 5.1e-12 1.5e-10 33.3 9.7 2 161 280 476 279 523 0.57 # 29605 # 33243 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_12 - 331 ResIII PF04851.10 184 4.3e-05 15.5 0.0 1 1 2.9e-06 8.3e-05 14.6 0.0 3 64 145 201 140 237 0.70 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_24 - 640 GTP_EFTU_D2 PF03144.20 74 3.7e-09 28.8 0.0 1 1 1.3e-10 7.6e-09 27.8 0.0 3 60 265 316 263 323 0.90 # 17306 # 19225 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.406 1_39 - 1213 DEAD PF00270.24 169 2.7e-09 28.8 0.7 1 2 3.2e-08 9.3e-07 20.6 0.1 2 107 284 390 283 526 0.77 # 29605 # 33243 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_39 - 1213 DEAD PF00270.24 169 2.7e-09 28.8 0.7 2 2 0.041 1.2 0.7 0.0 120 148 1166 1199 1122 1206 0.69 # 29605 # 33243 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_12 - 331 DEAD PF00270.24 169 5.3e-06 18.1 0.0 1 1 3.4e-07 9.8e-06 17.2 0.0 3 69 149 212 147 243 0.69 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_14 - 503 TrwB_AAD_bind PF10412.4 386 5.1e-20 63.5 0.0 1 2 2.8e-05 0.00079 10.1 0.0 42 125 49 144 20 189 0.72 # 8570 # 10078 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_14 - 503 TrwB_AAD_bind PF10412.4 386 5.1e-20 63.5 0.0 2 2 8e-18 2.3e-16 51.4 0.0 185 380 244 441 205 443 0.83 # 8570 # 10078 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_12 - 331 TrwB_AAD_bind PF10412.4 386 0.00011 12.9 0.0 1 1 5.8e-06 0.00017 12.4 0.0 16 42 161 187 153 217 0.85 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_25 - 153 CPT PF07931.7 174 1.1e-08 26.9 0.0 1 1 2.4e-10 1.4e-08 26.7 0.0 59 172 26 143 5 145 0.80 # 19959 # 20417 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.394 1_14 - 503 T4SS-DNA_transf PF02534.9 469 2.1e-106 348.3 0.0 1 1 5.8e-108 3.3e-106 347.7 0.0 32 461 13 464 4 470 0.86 # 8570 # 10078 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_24 - 640 GTP_EFTU PF00009.22 188 1.3e-59 192.9 0.4 1 1 3.2e-61 1.8e-59 192.4 0.4 2 185 2 237 1 240 0.92 # 17306 # 19225 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.406 1_12 - 331 RNA_helicase PF00910.17 107 0.00012 14.4 0.0 1 1 5.8e-06 0.00033 13.0 0.0 1 23 163 185 163 224 0.79 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 UPF0079 PF02367.12 123 1.6e-05 16.7 0.0 1 1 5.3e-07 3e-05 15.8 0.0 8 42 153 187 147 205 0.85 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_24 - 640 EFG_IV PF03764.13 120 7.2e-26 82.3 0.0 1 1 3.5e-27 2e-25 80.8 0.0 1 120 416 532 416 532 0.98 # 17306 # 19225 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.406 1_12 - 331 AAA_24 PF13479.1 213 0.00015 13.5 0.0 1 1 4.9e-06 0.00028 12.6 0.0 5 33 162 188 159 217 0.84 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_12 - 331 NACHT PF05729.7 166 1.9e-05 16.4 0.0 1 1 5.9e-07 3.4e-05 15.7 0.0 3 22 163 182 161 188 0.89 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_52 - 598 AAA_25 PF13481.1 194 4.8e-21 67.1 0.0 1 1 3.2e-22 9.1e-21 66.2 0.0 30 193 30 175 22 176 0.90 # 40779 # 42572 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.270 1_12 - 331 AAA_25 PF13481.1 194 0.00015 13.3 0.0 1 1 7.7e-06 0.00022 12.8 0.0 26 56 154 183 128 200 0.76 # 7274 # 8266 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_39 - 1213 SNF2_N PF00176.18 299 1.5e-21 68.5 4.9 1 3 7.9e-23 4.5e-21 66.9 0.4 24 204 295 555 235 616 0.76 # 29605 # 33243 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_39 - 1213 SNF2_N PF00176.18 299 1.5e-21 68.5 4.9 2 3 0.0054 0.31 1.8 0.1 194 287 742 839 722 847 0.74 # 29605 # 33243 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_39 - 1213 SNF2_N PF00176.18 299 1.5e-21 68.5 4.9 3 3 0.034 1.9 -0.8 0.1 123 151 1153 1182 1112 1202 0.74 # 29605 # 33243 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/b9f9aaf5-86dd-4aab-b2b7-8a5ef18a9a6a # Target file: checkm_output/bins/pNZ_CP007752.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_CP007752.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/b9f9aaf5-86dd-4aab-b2b7-8a5ef18a9a6a checkm_output/bins/pNZ_CP007752.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:51:24 2020 # [ok]