# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_25 - 318 Mg_chelatase PF01078.16 207 0.00095 11.5 0.1 1 2 7.4e-05 0.0088 8.3 0.0 14 65 91 142 81 154 0.80 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 Mg_chelatase PF01078.16 207 0.00095 11.5 0.1 2 2 0.019 2.2 0.5 0.0 109 128 173 192 162 196 0.90 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_4 - 142 RNA_pol_L_2 PF13656.1 77 0.00034 13.2 0.0 1 2 0.078 9.2 -1.0 0.0 9 25 37 53 14 61 0.70 # 3575 # 4000 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.244 1_4 - 142 RNA_pol_L_2 PF13656.1 77 0.00034 13.2 0.0 2 2 1e-05 0.0012 11.4 0.0 27 69 73 116 69 119 0.87 # 3575 # 4000 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.244 1_37 - 530 Terminase_6 PF03237.10 384 8.7e-38 123.1 0.6 1 1 9.3e-40 1.1e-37 122.8 0.6 2 383 147 514 146 515 0.92 # 25126 # 26715 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.382 1_18 - 400 AAA_2 PF07724.9 171 0.00031 13.8 0.0 1 1 4.3e-06 0.00051 13.1 0.0 6 89 150 227 146 271 0.66 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_12 - 620 DUF87 PF01935.12 229 2.5e-07 23.8 0.3 1 1 8.2e-09 9.7e-07 21.9 0.3 12 63 121 170 106 400 0.76 # 8436 # 10295 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.320 1_25 - 318 NB-ARC PF00931.17 287 3.9e-05 15.7 0.0 1 1 6.3e-07 7.5e-05 14.8 0.0 16 101 96 170 89 280 0.80 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 AAA_22 PF13401.1 131 1.9e-27 89.1 0.1 1 1 8.8e-29 5.2e-27 87.7 0.1 3 129 98 211 94 214 0.95 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_18 - 400 AAA_22 PF13401.1 131 8.8e-07 22.3 1.3 1 1 4.1e-06 0.00024 14.4 1.3 4 130 147 267 141 268 0.67 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_25 - 318 AAA_17 PF13207.1 121 5.2e-05 17.2 0.3 1 1 2.3e-06 0.00014 15.9 0.3 3 22 103 122 101 244 0.67 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_18 - 400 AAA_17 PF13207.1 121 0.0012 12.9 0.7 1 1 0.00027 0.016 9.2 0.2 2 21 150 169 149 303 0.68 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_25 - 318 Miro PF08477.8 119 0.00016 15.3 0.0 1 1 3.6e-06 0.00042 14.0 0.0 4 41 104 139 102 208 0.66 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 8_1 - 186 ArsA_ATPase PF02374.10 305 0.0015 10.7 1.2 1 2 4.2e-05 0.005 9.0 0.2 1 25 1 25 1 33 0.88 # 266 # 823 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.251 8_1 - 186 ArsA_ATPase PF02374.10 305 0.0015 10.7 1.2 2 2 0.03 3.5 -0.4 0.0 151 186 34 71 27 78 0.76 # 266 # 823 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.251 1_25 - 318 T2SE PF00437.15 272 1.5e-05 17.2 0.0 1 1 1.9e-07 2.3e-05 16.5 0.0 102 153 73 124 52 139 0.81 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_18 - 400 Zeta_toxin PF06414.7 201 0.00058 12.1 0.0 1 1 7.9e-06 0.00093 11.4 0.0 14 57 145 187 134 221 0.80 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 2_12 - 109 F420_oxidored PF03807.12 96 8.6e-05 16.1 0.2 1 1 1.1e-06 0.00012 15.6 0.2 19 81 43 104 36 108 0.81 # 6554 # 6880 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.229 1_25 - 318 Arch_ATPase PF01637.13 234 6.2e-07 22.4 0.0 1 1 2.1e-08 2.5e-06 20.5 0.0 11 68 92 144 91 204 0.70 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 AAA_16 PF13191.1 185 7e-07 22.5 0.2 1 2 1.9e-07 2.3e-05 17.6 0.0 18 47 93 122 76 148 0.81 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 AAA_16 PF13191.1 185 7e-07 22.5 0.2 2 2 0.0079 0.93 2.6 0.2 134 185 156 204 126 204 0.62 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 AAA_23 PF13476.1 202 0.00013 15.4 0.9 1 1 3.2e-06 0.00038 13.9 0.1 17 36 90 116 72 117 0.79 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 AAA_18 PF13238.1 129 0.00077 12.9 0.2 1 1 1.7e-05 0.0021 11.6 0.2 2 22 103 123 103 249 0.83 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 AAA_13 PF13166.1 712 0.00029 12.5 0.8 1 2 4.9e-06 0.00058 11.5 0.1 6 32 89 115 84 123 0.85 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 AAA_13 PF13166.1 712 0.00029 12.5 0.8 2 2 0.082 9.7 -2.5 0.0 217 250 206 237 184 241 0.84 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 8_1 - 186 CbiA PF01656.18 195 2e-06 20.5 0.4 1 2 2.4e-07 2.8e-05 16.7 0.1 1 23 3 25 3 27 0.95 # 266 # 823 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.251 8_1 - 186 CbiA PF01656.18 195 2e-06 20.5 0.4 2 2 0.0071 0.84 2.1 0.0 110 177 69 129 36 151 0.59 # 266 # 823 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.251 2_25 - 209 Ribosomal_S13 PF00416.17 107 0.079 6.6 7.3 1 2 0.00034 0.041 7.5 1.7 36 80 81 121 69 126 0.75 # 16103 # 16729 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.247 2_25 - 209 Ribosomal_S13 PF00416.17 107 0.079 6.6 7.3 2 2 0.024 2.9 1.6 0.3 38 60 177 199 159 208 0.71 # 16103 # 16729 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.247 1_18 - 400 KaiC PF06745.8 227 3.2e-05 16.3 0.0 1 1 1.2e-06 6.9e-05 15.2 0.0 18 116 146 246 134 266 0.84 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_25 - 318 KaiC PF06745.8 227 0.0003 13.1 0.0 1 1 8.9e-06 0.00052 12.3 0.0 16 41 96 121 80 148 0.84 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_18 - 400 AAA_14 PF13173.1 128 2.8e-07 23.6 0.1 1 1 1.4e-08 5.5e-07 22.7 0.1 2 74 147 228 146 292 0.68 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_25 - 318 AAA_14 PF13173.1 128 3.7e-07 23.3 0.0 1 1 1.8e-08 7.2e-07 22.3 0.0 2 97 99 206 98 241 0.68 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_2 - 665 AAA_14 PF13173.1 128 0.0035 10.4 5.2 1 3 0.0033 0.13 5.3 0.3 52 87 95 134 54 156 0.66 # 1156 # 3150 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.305 1_2 - 665 AAA_14 PF13173.1 128 0.0035 10.4 5.2 2 3 0.024 0.94 2.5 0.2 30 74 427 472 367 506 0.72 # 1156 # 3150 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.305 1_2 - 665 AAA_14 PF13173.1 128 0.0035 10.4 5.2 3 3 0.022 0.88 2.6 0.0 65 100 613 648 543 656 0.77 # 1156 # 3150 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.305 1_18 - 400 AAA PF00004.24 132 1.9e-17 56.9 0.0 1 1 6.1e-19 3.6e-17 56.0 0.0 2 131 151 287 150 288 0.87 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_25 - 318 AAA PF00004.24 132 1.2e-05 18.7 0.0 1 1 5.2e-07 3.1e-05 17.3 0.0 2 70 103 182 102 201 0.61 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_8 - 268 RNA_pol_Rpb1_5 PF04998.12 277 0.011 8.0 4.3 1 1 0.00013 0.015 7.6 4.3 126 232 84 192 64 220 0.66 # 6394 # 7197 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.229 1_12 - 620 PAPS_reduct PF01507.14 174 0.00087 12.3 0.3 1 1 1.8e-05 0.0021 11.0 0.3 12 70 453 517 451 539 0.79 # 8436 # 10295 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.320 1_12 - 620 TraG-D_C PF12696.2 128 2.5e-14 46.4 0.0 1 1 6.5e-16 7.7e-14 44.8 0.0 2 127 418 539 417 540 0.84 # 8436 # 10295 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.320 8_1 - 186 AAA_31 PF13614.1 157 8.2e-05 15.7 0.8 1 2 9.9e-06 0.0012 12.0 0.0 3 27 3 27 2 68 0.94 # 266 # 823 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.251 8_1 - 186 AAA_31 PF13614.1 157 8.2e-05 15.7 0.8 2 2 0.039 4.6 0.3 0.2 88 111 150 173 96 185 0.46 # 266 # 823 # 1 # ID=8_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.251 1_25 - 318 AAA_33 PF13671.1 143 0.00041 13.4 0.0 1 1 1.4e-05 0.00081 12.4 0.0 3 29 103 130 101 173 0.87 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_18 - 400 AAA_33 PF13671.1 143 0.00084 12.4 0.0 1 1 2.2e-05 0.0013 11.8 0.0 2 33 150 215 149 297 0.58 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_25 - 318 AAA_30 PF13604.1 196 4.7e-10 32.5 0.0 1 1 7.4e-12 8.8e-10 31.6 0.0 12 130 94 207 89 238 0.79 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 2_27 - 782 FtsK_SpoIIIE PF01580.13 205 0.00035 13.2 0.1 1 1 7.8e-06 0.00093 11.8 0.0 34 62 368 396 355 399 0.89 # 17300 # 19645 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_15 - 111 Caps_synth_GfcC PF06251.6 229 0.00017 13.9 0.2 1 1 1.7e-06 0.0002 13.7 0.2 12 94 21 102 14 108 0.82 # 11550 # 11882 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.252 1_18 - 400 6PF2K PF01591.13 223 3.1e-05 16.2 0.5 1 2 3.6e-05 0.0043 9.3 0.0 14 88 148 222 136 232 0.84 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_18 - 400 6PF2K PF01591.13 223 3.1e-05 16.2 0.5 2 2 0.00086 0.1 4.8 0.1 159 214 343 396 296 398 0.81 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_25 - 318 ABC_tran PF00005.22 137 0.00029 14.3 0.0 1 2 4.3e-05 0.0051 10.3 0.0 8 29 96 117 90 127 0.87 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 ABC_tran PF00005.22 137 0.00029 14.3 0.0 2 2 0.024 2.8 1.4 0.0 118 135 162 179 157 181 0.89 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 ATP-synt_ab PF00006.20 215 0.0011 11.6 0.0 1 1 1.2e-05 0.0015 11.2 0.0 18 63 102 291 99 317 0.67 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 AAA_19 PF13245.1 76 0.00014 14.7 0.0 1 1 2.7e-06 0.00032 13.6 0.0 2 29 91 117 91 141 0.84 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 2_27 - 782 AAA_10 PF12846.2 304 1.1e-29 96.9 1.0 1 1 3.2e-31 1.9e-29 96.1 1.0 1 294 372 725 372 734 0.86 # 17300 # 19645 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_12 - 620 AAA_10 PF12846.2 304 4.3e-19 62.1 0.0 1 1 1e-20 5.9e-19 61.7 0.0 2 289 132 484 131 498 0.83 # 8436 # 10295 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.320 1_25 - 318 ResIII PF04851.10 184 0.0011 12.0 0.3 1 2 3.3e-05 0.0039 10.1 0.2 22 56 90 129 49 190 0.78 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 ResIII PF04851.10 184 0.0011 12.0 0.3 2 2 0.069 8.2 -0.7 0.0 138 160 162 184 132 206 0.71 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 2_27 - 782 Zot PF05707.7 193 2.5e-05 16.9 1.0 1 2 0.044 5.2 -0.4 0.0 4 16 376 388 375 397 0.83 # 17300 # 19645 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 2_27 - 782 Zot PF05707.7 193 2.5e-05 16.9 1.0 2 2 1.6e-06 0.00018 14.1 0.2 80 136 656 709 587 758 0.84 # 17300 # 19645 # 1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_25 - 318 Viral_helicase1 PF01443.13 234 4.5e-07 22.7 0.0 1 1 1.2e-08 7.2e-07 22.0 0.0 2 79 103 184 102 197 0.81 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_18 - 400 Viral_helicase1 PF01443.13 234 0.00052 12.7 0.0 1 1 1.4e-05 0.00081 12.1 0.0 4 72 153 220 150 224 0.72 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_25 - 318 DUF2075 PF09848.4 352 7.3e-05 14.9 0.1 1 1 1.4e-06 0.00017 13.7 0.1 2 95 100 182 99 239 0.70 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_18 - 400 DUF815 PF05673.8 250 7.1e-06 18.2 0.0 1 1 1.6e-07 1.8e-05 16.8 0.0 44 116 138 219 101 234 0.80 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_12 - 620 DUF853 PF05872.7 504 0.00048 11.6 0.0 1 1 6.2e-06 0.00073 11.0 0.0 5 59 115 169 111 218 0.90 # 8436 # 10295 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.320 1_12 - 620 TrwB_AAD_bind PF10412.4 386 7.2e-14 44.2 0.3 1 3 6.9e-09 4.1e-07 22.0 0.0 9 57 125 171 119 198 0.88 # 8436 # 10295 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.320 1_12 - 620 TrwB_AAD_bind PF10412.4 386 7.2e-14 44.2 0.3 2 3 0.0064 0.38 2.4 0.1 103 168 224 289 214 310 0.85 # 8436 # 10295 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.320 1_12 - 620 TrwB_AAD_bind PF10412.4 386 7.2e-14 44.2 0.3 3 3 3.7e-07 2.2e-05 16.3 0.0 145 373 318 546 310 554 0.76 # 8436 # 10295 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.320 1_25 - 318 TrwB_AAD_bind PF10412.4 386 0.00079 11.2 0.0 1 1 2.1e-05 0.0013 10.5 0.0 4 37 87 121 84 125 0.74 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 AAA_11 PF13086.1 236 5.7e-05 15.9 0.0 1 1 8.3e-07 9.7e-05 15.1 0.0 9 75 91 146 85 222 0.81 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 4_8 - 268 NAD_binding_5 PF07994.7 295 0.0017 11.0 6.0 1 1 2.3e-05 0.0027 10.3 6.0 65 132 182 248 122 265 0.73 # 3383 # 4186 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.251 2_7 - 254 MethyltransfD12 PF02086.10 260 8.5e-31 100.4 4.0 1 1 1.2e-32 1.5e-30 99.6 4.0 1 259 12 236 12 237 0.80 # 3202 # 3963 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.361 1_25 - 318 AAA_24 PF13479.1 213 2.9e-05 16.9 0.0 1 1 3.9e-07 4.6e-05 16.2 0.0 6 30 102 130 98 190 0.73 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 UvrD-helicase PF00580.16 315 0.00019 13.9 0.1 1 1 4e-06 0.00047 12.6 0.1 6 33 93 119 88 123 0.79 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_25 - 318 AAA_25 PF13481.1 194 0.00062 12.3 0.0 1 1 2.3e-05 0.0013 11.2 0.0 31 51 97 117 68 122 0.84 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 1_18 - 400 AAA_25 PF13481.1 194 0.0018 10.8 0.4 1 2 0.0015 0.091 5.3 0.2 36 49 150 163 144 171 0.87 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_18 - 400 AAA_25 PF13481.1 194 0.0018 10.8 0.4 2 2 0.0058 0.34 3.4 0.0 123 175 190 244 167 249 0.79 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_18 - 400 AAA_5 PF07728.9 139 1e-06 21.7 0.0 1 1 5.1e-08 3e-06 20.2 0.0 2 100 150 252 149 278 0.77 # 12993 # 14192 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.287 1_25 - 318 AAA_5 PF07728.9 139 0.00015 14.7 0.0 1 1 7.5e-06 0.00044 13.1 0.0 3 98 103 203 101 220 0.68 # 19483 # 20436 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.391 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/71645b90-aca6-4a40-af64-63b4908741ab # Target file: checkm_output/bins/pNZ_CP007000.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_CP007000.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/71645b90-aca6-4a40-af64-63b4908741ab checkm_output/bins/pNZ_CP007000.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:51:21 2020 # [ok]