# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 73 IstB_IS21 PF01695.12 178 9.9e-08 18.9 0.0 1 1 5.5e-08 1.1e-07 18.8 0.0 45 85 31 71 19 72 0.92 # 2 # 220 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.301 1_1 - 73 CbiA PF01656.18 195 6.5e-06 13.0 0.0 1 1 4.2e-06 8.4e-06 12.6 0.0 1 29 35 63 35 64 0.90 # 2 # 220 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.301 1_1 - 73 AAA_29 PF13555.1 62 9.7e-06 12.6 0.0 1 1 7.1e-06 1.4e-05 12.1 0.0 16 37 27 47 21 50 0.83 # 2 # 220 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.301 1_1 - 73 AAA_25 PF13481.1 194 1.1e-08 22.1 0.0 1 1 5.7e-09 1.1e-08 22.0 0.0 30 60 30 61 23 73 0.83 # 2 # 220 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.301 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/00ea9124-3c5a-4106-b875-85790c037e2b # Target file: checkm_output/bins/pNZ_AAFL01000034.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_AAFL01000034.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/00ea9124-3c5a-4106-b875-85790c037e2b checkm_output/bins/pNZ_AAFL01000034.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:51:09 2020 # [ok]