#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_3                  -            574 IstB_IS21            PF01695.12   178   1.3e-07   19.1   0.0   1   2     1e-06   3.1e-06   14.7   0.0    46    85    32    71    27    92 0.86 # 348 # 2069 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.272
1_3                  -            574 IstB_IS21            PF01695.12   178   1.3e-07   19.1   0.0   2   2     0.014     0.041    1.2   0.0    98   139   110   159    98   177 0.69 # 348 # 2069 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.272
1_3                  -            574 KaiC                 PF06745.8    227     1e-06   15.9   0.0   1   2   1.8e-06   5.3e-06   13.6   0.0    16    71    30    84    23   214 0.85 # 348 # 2069 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.272
1_3                  -            574 KaiC                 PF06745.8    227     1e-06   15.9   0.0   2   2     0.082      0.24   -1.7   0.0   133   156   329   352   322   358 0.85 # 348 # 2069 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.272
1_3                  -            574 AAA                  PF00004.24   132   4.4e-06   14.9   0.3   1   2   2.3e-05     7e-05   11.0   0.0     2   105    37   166    36   177 0.66 # 348 # 2069 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.272
1_3                  -            574 AAA                  PF00004.24   132   4.4e-06   14.9   0.3   2   2     0.042      0.13    0.5   0.0    48    74   412   434   378   445 0.70 # 348 # 2069 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.272
1_3                  -            574 DnaB_C               PF03796.10   259   1.5e-07   18.4   0.0   1   2   1.9e-07   5.7e-07   16.5   0.0    13   117    27   136    22   157 0.79 # 348 # 2069 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.272
1_3                  -            574 DnaB_C               PF03796.10   259   1.5e-07   18.4   0.0   2   2     0.022     0.066   -0.1   0.0   132   185   122   177   116   179 0.78 # 348 # 2069 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.272
1_3                  -            574 AAA_25               PF13481.1    194   3.4e-23   70.0   0.0   1   1   2.1e-23   6.3e-23   69.1   0.0    30   193    30   175    20   176 0.90 # 348 # 2069 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.272
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/49434fec-5b2f-4f5a-b8fb-778f7411fb8a
# Target file:     checkm_output/bins/pNZ_AAFL01000031.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_AAFL01000031.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/49434fec-5b2f-4f5a-b8fb-778f7411fb8a checkm_output/bins/pNZ_AAFL01000031.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:51:07 2020
# [ok]