# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 640 AIG1 PF04548.11 212 1.6e-05 13.0 0.0 1 1 6.6e-06 4e-05 11.7 0.0 32 62 51 81 43 108 0.84 # 1586 # 3505 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=6bp;gc_cont=0.403 1_4 - 640 Septin PF00735.13 281 1.6e-05 12.9 0.1 1 1 4.9e-06 2.9e-05 12.0 0.1 7 77 6 82 3 91 0.68 # 1586 # 3505 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=6bp;gc_cont=0.403 1_4 - 640 Miro PF08477.8 119 1e-06 18.2 0.0 1 1 4.4e-07 2.6e-06 16.9 0.0 9 119 13 131 5 131 0.75 # 1586 # 3505 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=6bp;gc_cont=0.403 1_4 - 640 TIGR03594 TIGR03594 432 3.4e-09 24.7 0.3 1 3 0.044 0.27 -1.3 0.0 176 211 4 42 2 50 0.74 # 1586 # 3505 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=6bp;gc_cont=0.403 1_4 - 640 TIGR03594 TIGR03594 432 3.4e-09 24.7 0.3 2 3 2e-08 1.2e-07 19.6 0.1 31 123 51 135 47 154 0.87 # 1586 # 3505 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=6bp;gc_cont=0.403 1_4 - 640 TIGR03594 TIGR03594 432 3.4e-09 24.7 0.3 3 3 0.006 0.036 1.5 0.0 304 347 196 239 187 265 0.79 # 1586 # 3505 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=6bp;gc_cont=0.403 1_4 - 640 MMR_HSR1 PF01926.18 116 2.6e-09 26.1 0.1 1 1 8.6e-10 5.2e-09 25.1 0.1 4 116 8 129 5 129 0.68 # 1586 # 3505 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=6bp;gc_cont=0.403 1_4 - 640 GTP_EFTU_D2 PF03144.20 74 1.6e-10 30.0 0.0 1 1 5.6e-11 3.4e-10 29.0 0.0 3 60 265 316 263 323 0.90 # 1586 # 3505 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=6bp;gc_cont=0.403 1_4 - 640 GTP_EFTU PF00009.22 188 1.3e-60 193.0 0.4 1 1 3.2e-61 1.9e-60 192.4 0.4 2 185 2 237 1 240 0.92 # 1586 # 3505 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=6bp;gc_cont=0.403 1_4 - 640 EFG_IV PF03764.13 120 7.6e-27 82.3 0.0 1 1 3.5e-27 2.1e-26 80.8 0.0 1 120 416 532 416 532 0.98 # 1586 # 3505 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=6bp;gc_cont=0.403 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/6da8f613-de84-41de-9109-69595e579b31 # Target file: checkm_output/bins/pNZ_AAFL01000026.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_AAFL01000026.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6da8f613-de84-41de-9109-69595e579b31 checkm_output/bins/pNZ_AAFL01000026.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:51:05 2020 # [ok]