# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_13 - 1176 ATP_bind_1 PF03029.12 238 4.3e-05 13.7 0.1 1 2 0.0079 0.15 2.1 0.0 1 14 129 142 129 148 0.91 # 13795 # 17322 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.240 1_13 - 1176 ATP_bind_1 PF03029.12 238 4.3e-05 13.7 0.1 2 2 6.8e-05 0.0013 8.8 0.1 133 180 251 297 217 362 0.62 # 13795 # 17322 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.240 1_13 - 1176 AAA_17 PF13207.1 121 0.00079 10.9 4.6 1 1 8.5e-05 0.0016 9.9 0.9 1 46 126 198 126 378 0.65 # 13795 # 17322 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.240 1_13 - 1176 Miro PF08477.8 119 1.8e-05 15.8 0.2 1 1 1.8e-05 0.00034 11.7 0.2 2 49 127 175 126 285 0.70 # 13795 # 17322 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.240 1_13 - 1176 AAA_29 PF13555.1 62 3.6e-05 13.9 0.0 1 2 1.9e-05 0.00037 10.7 0.0 16 40 114 141 110 143 0.72 # 13795 # 17322 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.240 1_13 - 1176 AAA_29 PF13555.1 62 3.6e-05 13.9 0.0 2 2 0.061 1.2 -0.6 0.0 24 38 841 856 831 865 0.78 # 13795 # 17322 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.240 1_13 - 1176 MMR_HSR1 PF01926.18 116 4.4e-06 17.3 0.1 1 1 9.5e-07 1.8e-05 15.3 0.1 2 105 127 266 126 283 0.61 # 13795 # 17322 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.240 1_13 - 1176 DUF258 PF03193.11 161 1.8e-06 17.8 0.0 1 1 2.8e-07 5.3e-06 16.3 0.0 24 96 110 182 89 199 0.73 # 13795 # 17322 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.240 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/d3cd3b33-8a86-484a-b1b3-70041e8706ef # Target file: checkm_output/bins/pNZ_AAFL01000019.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_AAFL01000019.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d3cd3b33-8a86-484a-b1b3-70041e8706ef checkm_output/bins/pNZ_AAFL01000019.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:51:02 2020 # [ok]