# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 143 SSB PF00436.20 104 1.1e-33 106.3 1.1 1 1 6.4e-35 1.7e-33 105.7 1.1 1 104 2 104 2 104 0.97 # 4476 # 4904 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 1_5 - 143 tRNA_anti-codon PF01336.20 75 8.9e-07 19.9 0.1 1 1 4.7e-08 1.3e-06 19.4 0.1 12 73 33 102 9 104 0.84 # 4476 # 4904 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/2fe0c876-618b-46f9-83b7-bb9fbb9e7d50 # Target file: checkm_output/bins/pNZ_AAFJ01000017.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNZ_AAFJ01000017.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/2fe0c876-618b-46f9-83b7-bb9fbb9e7d50 checkm_output/bins/pNZ_AAFJ01000017.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:51:00 2020 # [ok]