# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_26 - 223 MipZ PF09140.6 261 4.8e-16 50.6 0.1 1 1 1.6e-16 8.4e-15 46.5 0.1 2 140 3 125 2 147 0.79 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_26 - 223 YhjQ PF06564.7 244 3.7e-08 25.0 0.0 1 2 4.2e-09 2.2e-07 22.4 0.0 1 49 1 49 1 59 0.84 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_26 - 223 YhjQ PF06564.7 244 3.7e-08 25.0 0.0 2 2 0.025 1.3 0.3 0.0 105 145 71 111 51 119 0.72 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_14 - 153 SSB PF00436.20 104 1.1e-26 84.8 0.0 1 1 2.7e-28 1.4e-26 84.4 0.0 1 103 1 103 1 104 0.99 # 11718 # 12176 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 1_52 - 823 DUF87 PF01935.12 229 0.00091 11.1 19.8 1 1 3.4e-05 0.0018 10.1 7.0 25 212 468 628 465 647 0.55 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_5 - 318 Septin PF00735.13 281 0.00011 13.2 1.2 1 2 0.063 3.3 -1.4 0.1 77 117 36 76 34 79 0.80 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 Septin PF00735.13 281 0.00011 13.2 1.2 2 2 3.5e-06 0.00019 12.5 0.1 6 55 145 200 141 215 0.63 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_52 - 823 AAA_22 PF13401.1 131 1e-05 17.7 0.0 1 1 5.7e-06 0.00015 13.9 0.0 4 31 466 493 463 585 0.71 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_5 - 318 AAA_22 PF13401.1 131 0.00023 13.4 0.1 1 1 5.5e-05 0.0015 10.7 0.1 3 30 142 169 140 288 0.86 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_26 - 223 SRP54 PF00448.17 196 3.7e-08 25.0 0.0 1 1 1.4e-09 7.5e-08 24.0 0.0 11 133 12 135 7 152 0.75 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_52 - 823 AAA_17 PF13207.1 121 5.4e-08 25.7 0.1 1 1 2.2e-08 5.9e-07 22.4 0.1 4 67 471 553 470 610 0.60 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_5 - 318 AAA_17 PF13207.1 121 6.7e-05 15.7 0.3 1 2 0.075 2 1.3 0.1 28 79 19 74 10 125 0.58 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 AAA_17 PF13207.1 121 6.7e-05 15.7 0.3 2 2 2.7e-05 0.00071 12.4 0.0 2 32 146 178 145 295 0.76 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 Miro PF08477.8 119 1.1e-06 21.1 0.0 1 1 3.8e-08 2e-06 20.3 0.0 2 48 146 189 145 234 0.69 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_26 - 223 ArsA_ATPase PF02374.10 305 2.4e-09 28.6 0.1 1 1 7.1e-11 3.8e-09 28.0 0.1 8 47 9 48 1 131 0.89 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_5 - 318 T2SE PF00437.15 272 1.6e-50 163.5 0.0 1 1 3.7e-52 2e-50 163.2 0.0 11 271 20 294 12 295 0.91 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_50 - 102 TIGR00810 TIGR00810 73 0.012 7.4 13.5 1 1 9.2e-06 0.00049 11.9 7.7 6 73 4 72 2 72 0.93 # 34291 # 34596 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.297 1_5 - 318 Zeta_toxin PF06414.7 201 3.9e-06 18.1 0.0 1 1 1.4e-07 7.3e-06 17.2 0.0 14 49 141 177 131 204 0.89 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_26 - 223 VirC1 PF07015.6 231 2.1e-11 35.3 0.0 1 1 4.8e-13 2.5e-11 35.0 0.0 1 149 1 148 1 202 0.86 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_26 - 223 Fer4_NifH PF00142.13 273 1.1e-06 19.9 0.0 1 1 4.9e-08 2.6e-06 18.7 0.0 7 40 9 42 3 58 0.89 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_5 - 318 Arch_ATPase PF01637.13 234 0.00016 13.4 0.1 1 1 4.5e-06 0.00024 12.8 0.1 10 73 135 198 133 264 0.78 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 AAA_16 PF13191.1 185 9.9e-05 14.4 0.0 1 1 2.8e-06 0.00015 13.8 0.0 24 51 143 170 126 214 0.86 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_26 - 223 AAA_23 PF13476.1 202 7.2e-06 18.4 2.7 1 1 4e-07 1.1e-05 17.9 2.7 29 144 12 198 10 222 0.45 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_5 - 318 AAA_23 PF13476.1 202 0.0017 10.7 5.6 1 1 0.00019 0.005 9.1 5.6 17 39 139 163 125 316 0.89 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 AAA_18 PF13238.1 129 2.3e-05 16.8 0.1 1 1 3.8e-06 0.0001 14.7 0.0 1 63 146 212 146 231 0.82 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_52 - 823 AAA_18 PF13238.1 129 0.00049 12.4 0.1 1 1 1.9e-05 0.00049 12.4 0.1 2 34 470 505 470 580 0.71 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_26 - 223 CbiA PF01656.18 195 1e-24 79.0 0.1 1 1 2.5e-26 1.3e-24 78.6 0.1 1 173 4 163 4 189 0.75 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_5 - 318 IIGP PF05049.8 376 2.4e-05 15.2 0.0 1 2 2.2e-06 0.00011 13.0 0.0 26 56 134 164 126 171 0.88 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 IIGP PF05049.8 376 2.4e-05 15.2 0.0 2 2 0.031 1.7 -0.7 0.0 103 124 273 294 265 299 0.79 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 AAA_14 PF13173.1 128 5.9e-05 15.0 0.0 1 1 2.2e-06 0.00012 14.1 0.0 1 70 142 224 142 257 0.64 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 AAA_29 PF13555.1 62 1.5e-05 16.5 0.1 1 1 1.2e-06 3.1e-05 15.5 0.1 19 43 140 163 130 179 0.79 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_52 - 823 AAA_29 PF13555.1 62 0.00025 12.6 0.0 1 1 2e-05 0.00054 11.5 0.0 21 39 465 482 453 491 0.83 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_5 - 318 Sigma54_activat PF00158.21 168 9.4e-05 13.9 0.0 1 1 2.9e-06 0.00015 13.3 0.0 11 46 132 167 122 185 0.83 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 DUF258 PF03193.11 161 7.1e-06 17.3 0.0 1 1 2.4e-07 1.2e-05 16.5 0.0 22 61 129 169 114 194 0.81 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_7 - 629 TraG-D_C PF12696.2 128 6.3e-28 89.2 0.0 1 1 1.2e-29 6.3e-28 89.2 0.0 2 125 420 536 419 539 0.89 # 4438 # 6324 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 1_26 - 223 AAA_31 PF13614.1 157 7.3e-09 27.7 0.0 1 2 1.7e-08 9.1e-07 20.9 0.0 2 66 3 67 2 83 0.71 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_26 - 223 AAA_31 PF13614.1 157 7.3e-09 27.7 0.0 2 2 0.0011 0.06 5.3 0.0 114 152 77 117 67 121 0.80 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_5 - 318 FtsK_SpoIIIE PF01580.13 205 3.4e-07 21.9 0.1 1 1 2.8e-08 7.3e-07 20.8 0.1 34 59 138 164 130 169 0.88 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_52 - 823 FtsK_SpoIIIE PF01580.13 205 9.4e-07 20.5 0.0 1 1 9.1e-08 2.4e-06 19.1 0.0 31 64 457 492 432 496 0.82 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_5 - 318 Dynamin_N PF00350.18 168 2.6e-05 16.1 0.0 1 1 1.3e-06 6.9e-05 14.7 0.0 1 41 146 185 146 219 0.67 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 ABC_tran PF00005.22 137 1.3e-07 24.0 0.1 1 1 7e-09 1.8e-07 23.5 0.1 8 70 140 201 133 278 0.72 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_52 - 823 ABC_tran PF00005.22 137 0.00014 14.2 4.9 1 2 0.061 1.6 1.0 0.2 57 111 120 194 83 237 0.64 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_52 - 823 ABC_tran PF00005.22 137 0.00014 14.2 4.9 2 2 6.4e-06 0.00017 13.9 0.3 11 36 466 491 463 638 0.76 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_52 - 823 AAA_10 PF12846.2 304 9e-35 112.5 2.0 1 1 5.1e-36 9e-35 112.5 2.0 1 304 466 742 466 742 0.90 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_7 - 629 AAA_10 PF12846.2 304 9.9e-09 27.0 2.7 1 1 1.2e-09 2.2e-08 25.8 2.7 4 299 138 497 136 499 0.66 # 4438 # 6324 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 1_5 - 318 AAA_10 PF12846.2 304 4.3e-05 15.0 0.4 1 1 4.1e-06 7.2e-05 14.3 0.4 2 37 144 179 143 312 0.67 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 ResIII PF04851.10 184 0.00019 13.3 0.0 1 1 5.4e-06 0.00029 12.7 0.0 22 70 135 190 89 229 0.79 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_6 - 136 RRF PF01765.14 165 4.3e-05 15.0 4.1 1 1 1.1e-06 5.7e-05 14.6 4.1 63 129 60 128 9 135 0.84 # 4034 # 4441 # 1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.282 1_5 - 318 DUF2075 PF09848.4 352 1.9e-05 15.7 0.0 1 1 4.8e-07 2.5e-05 15.3 0.0 1 51 143 208 143 241 0.67 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_52 - 823 PduV-EutP PF10662.4 143 6.9e-05 14.4 0.0 1 1 3.9e-06 0.00021 12.8 0.0 3 28 468 493 466 518 0.89 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_5 - 318 DEAD PF00270.24 169 4.7e-05 14.9 0.0 1 1 1.5e-06 8.1e-05 14.2 0.0 8 32 136 161 132 216 0.72 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_7 - 629 TrwB_AAD_bind PF10412.4 386 3.4e-30 96.8 0.0 1 2 3.5e-06 6.2e-05 13.7 0.0 16 148 136 282 122 291 0.77 # 4438 # 6324 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 1_7 - 629 TrwB_AAD_bind PF10412.4 386 3.4e-30 96.8 0.0 2 2 1.3e-26 2.2e-25 81.0 0.1 141 343 315 516 298 551 0.82 # 4438 # 6324 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 1_52 - 823 TrwB_AAD_bind PF10412.4 386 3e-12 37.7 0.2 1 2 1.6e-05 0.00028 11.6 0.1 15 38 466 489 461 516 0.89 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_52 - 823 TrwB_AAD_bind PF10412.4 386 3e-12 37.7 0.2 2 2 3.5e-09 6.2e-08 23.6 0.0 222 363 635 775 625 793 0.73 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_5 - 318 TrwB_AAD_bind PF10412.4 386 9e-06 16.4 0.0 1 1 8e-07 1.4e-05 15.8 0.0 14 51 142 179 138 190 0.85 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 Sigma54_activ_2 PF14532.1 138 6.8e-05 15.0 0.0 1 1 2.2e-06 0.00011 14.2 0.0 12 60 134 182 132 196 0.88 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_7 - 629 T4SS-DNA_transf PF02534.9 469 5.2e-75 244.7 5.8 1 1 3.2e-76 1.7e-74 243.0 5.3 46 453 137 568 94 583 0.83 # 4438 # 6324 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 1_47 - 135 DWNN PF08783.6 74 0.0023 9.9 5.0 1 1 7.6e-06 0.0004 12.4 1.2 2 43 83 122 82 132 0.87 # 30620 # 31024 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.227 1_26 - 223 ArgK PF03308.11 267 0.00022 12.0 0.0 1 1 7.8e-06 0.00041 11.1 0.0 39 69 12 42 6 50 0.92 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_5 - 318 Pox_A32 PF04665.7 241 4.1e-05 14.9 0.0 1 1 1.3e-06 7e-05 14.2 0.0 7 37 137 167 132 190 0.88 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_26 - 223 RNA_helicase PF00910.17 107 0.00024 13.3 0.1 1 2 0.00025 0.013 7.7 0.0 6 30 9 31 4 90 0.74 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_26 - 223 RNA_helicase PF00910.17 107 0.00024 13.3 0.1 2 2 0.0061 0.32 3.3 0.0 62 84 133 156 116 168 0.75 # 16628 # 17296 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_5 - 318 UPF0079 PF02367.12 123 0.00031 12.4 0.0 1 1 1.2e-05 0.00065 11.4 0.0 8 45 136 173 132 176 0.83 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_52 - 823 NACHT PF05729.7 166 0.00017 13.3 0.7 1 2 0.026 0.7 1.5 0.0 13 48 134 166 134 231 0.77 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_52 - 823 NACHT PF05729.7 166 0.00017 13.3 0.7 2 2 0.00018 0.0046 8.6 0.0 4 24 470 490 468 497 0.85 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_5 - 318 NACHT PF05729.7 166 0.00028 12.6 0.0 1 1 1.9e-05 0.00049 11.8 0.0 3 24 146 167 144 172 0.89 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_29 - 374 AAA_25 PF13481.1 194 6.7e-05 14.3 1.4 1 1 4.5e-06 7.9e-05 14.1 0.1 106 177 226 306 179 309 0.78 # 19916 # 21037 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.258 1_52 - 823 AAA_25 PF13481.1 194 7.2e-05 14.2 0.0 1 1 1.2e-05 0.00021 12.7 0.0 27 57 461 490 444 507 0.81 # 34848 # 37316 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.286 1_5 - 318 AAA_25 PF13481.1 194 0.00029 12.3 0.0 1 1 2.3e-05 0.00041 11.8 0.0 26 83 136 190 114 259 0.84 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 1_5 - 318 AAA_28 PF13521.1 163 1.8e-05 16.8 0.0 1 1 6.1e-07 3.2e-05 15.9 0.0 2 94 146 238 145 260 0.68 # 3071 # 4024 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.292 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/f06e42e2-32d7-412e-a82b-ede67a12bcf9 # Target file: checkm_output/bins/pNC_008770.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pNC_008770.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/f06e42e2-32d7-412e-a82b-ede67a12bcf9 checkm_output/bins/pNC_008770.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:50:54 2020 # [ok]