# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_15 - 572 N6_N4_Mtase PF01555.13 231 1.2e-60 195.3 4.0 1 1 1.5e-61 2.7e-60 194.1 4.0 1 225 200 431 200 436 0.89 # 12165 # 13880 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 1_15 - 572 Cons_hypoth95 PF03602.10 183 5.8e-05 13.0 0.0 1 1 8.8e-06 0.00016 11.6 0.0 104 143 188 228 164 261 0.76 # 12165 # 13880 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.286 1_14 - 864 ResIII PF04851.10 184 3e-34 108.9 1.5 1 1 7.5e-35 1.3e-33 106.8 1.5 2 182 35 236 34 238 0.90 # 9581 # 12172 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 1_14 - 864 DUF2075 PF09848.4 352 8.2e-07 18.7 0.2 1 1 1.8e-07 3.2e-06 16.7 0.2 10 112 70 210 67 299 0.80 # 9581 # 12172 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 1_14 - 864 DEAD PF00270.24 169 8.1e-10 28.9 0.1 1 1 8.8e-11 1.6e-09 28.0 0.1 15 139 62 212 38 242 0.69 # 9581 # 12172 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/abf6b414-a780-47ee-92db-0a32b86e6337 # Target file: checkm_output/bins/pHQ128580.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pHQ128580.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/abf6b414-a780-47ee-92db-0a32b86e6337 checkm_output/bins/pHQ128580.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:50:32 2020 # [ok]