# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 246 Methyltransf_32 PF13679.1 141 2.8e-06 17.6 0.0 1 1 2.6e-07 4.7e-06 16.8 0.0 12 69 17 67 9 98 0.82 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 RrnaAD PF00398.15 262 2.1e-74 240.3 6.8 1 1 1.3e-75 2.3e-74 240.1 6.8 3 261 2 242 1 243 0.96 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 Methyltransf_18 PF12847.2 112 1.2e-09 29.3 0.0 1 1 9.8e-11 1.8e-09 28.7 0.0 2 74 30 98 29 151 0.87 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 Methyltransf_11 PF08241.7 95 1.6e-05 15.9 0.0 1 1 1.8e-06 3.2e-05 14.9 0.0 2 59 35 92 34 100 0.86 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 CMAS PF02353.15 273 3.6e-05 13.4 0.4 1 1 4.2e-06 7.6e-05 12.3 0.0 51 99 18 65 12 96 0.81 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 Methyltransf_25 PF13649.1 101 9.6e-07 19.7 0.0 1 1 1.6e-07 2.9e-06 18.2 0.0 1 88 33 112 33 129 0.82 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 PCMT PF01135.14 210 2.1e-07 21.1 0.0 1 1 2.5e-08 4.4e-07 20.1 0.0 58 120 14 73 2 86 0.83 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 Methyltransf_26 PF13659.1 117 1.9e-09 28.1 0.0 1 1 1.8e-10 3.3e-09 27.4 0.0 2 83 31 106 30 200 0.81 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 MTS PF05175.9 170 2.3e-08 24.0 0.0 1 1 2.1e-09 3.8e-08 23.4 0.0 24 118 22 113 9 121 0.84 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 NodS PF05401.6 201 1.3e-08 24.9 0.0 1 1 1.2e-09 2.1e-08 24.2 0.0 41 120 27 106 7 116 0.86 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 Methyltransf_31 PF13847.1 152 1.9e-08 24.5 0.1 1 1 1.6e-09 2.8e-08 24.0 0.1 2 76 28 97 27 201 0.87 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 TRM13 PF05206.9 259 4.7e-05 13.1 0.1 1 1 4.3e-06 7.8e-05 12.4 0.1 4 65 15 76 12 100 0.77 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 DOT1 PF08123.8 205 8.9e-06 15.6 0.2 1 2 1.3e-06 2.4e-05 14.2 0.0 28 84 15 69 11 95 0.79 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 DOT1 PF08123.8 205 8.9e-06 15.6 0.2 2 2 0.099 1.8 -1.7 0.1 83 119 184 220 168 231 0.51 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 TIGR00755 TIGR00755 256 4.5e-45 144.0 3.2 1 1 3e-46 5.4e-45 143.8 3.2 5 227 5 221 1 235 0.88 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_2 - 246 Methyltransf_23 PF13489.1 161 2e-07 21.4 0.1 1 1 3.2e-08 5.7e-07 19.9 0.1 7 60 16 85 9 225 0.82 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 1_6 - 171 TPMT PF05724.6 218 2.4e-05 14.3 0.0 1 1 2.1e-06 3.8e-05 13.7 0.0 160 190 17 47 7 71 0.83 # 6605 # 7117 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AATAA;rbs_spacer=7bp;gc_cont=0.417 1_2 - 246 Methyltransf_4 PF02390.12 197 1.1e-05 15.0 0.3 1 1 1.1e-06 1.9e-05 14.2 0.1 17 90 27 93 3 102 0.66 # 2033 # 2770 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.331 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/18706bf9-e975-4f56-9078-09cfee64f892 # Target file: checkm_output/bins/pGU591497.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGU591497.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/18706bf9-e975-4f56-9078-09cfee64f892 checkm_output/bins/pGU591497.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:50:28 2020 # [ok]