# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_26 - 569 Mg_chelatase PF01078.16 207 0.001 12.5 0.0 1 1 7.8e-06 0.0019 11.5 0.0 22 68 356 402 342 410 0.84 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_26 - 569 cobW PF02492.14 178 0.0014 12.2 0.4 1 1 4.8e-05 0.006 10.2 0.1 4 22 360 378 358 413 0.74 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 2_49 - 645 cobW PF02492.14 178 0.0018 11.9 0.0 1 1 3.1e-05 0.0038 10.9 0.0 4 30 255 282 252 297 0.76 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_43 - 176 Thymidylate_kin PF02223.12 186 0.00014 15.4 0.3 1 2 0.00098 0.24 4.9 0.0 7 34 12 40 8 67 0.78 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_43 - 176 Thymidylate_kin PF02223.12 186 0.00014 15.4 0.3 2 2 6.1e-05 0.015 8.8 0.1 118 173 84 139 71 147 0.64 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 2_5 - 282 Rad17 PF03215.10 519 8.7e-05 15.5 0.1 1 1 4.7e-07 0.00012 15.1 0.1 47 127 32 114 8 158 0.75 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 1_43 - 176 IstB_IS21 PF01695.12 178 1.4e-05 18.7 0.0 1 1 7.2e-08 1.8e-05 18.4 0.0 49 122 3 77 1 125 0.84 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_23 - 372 AIG1 PF04548.11 212 5.7e-07 23.0 1.8 1 1 1e-08 2.6e-06 20.9 1.8 2 151 23 170 22 179 0.61 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 2_5 - 282 DUF87 PF01935.12 229 3.8e-05 17.8 2.3 1 1 3.8e-07 4.7e-05 17.5 0.2 26 59 33 65 22 67 0.92 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 3_23 - 372 DUF87 PF01935.12 229 0.0039 11.2 3.8 1 1 1.7e-05 0.0021 12.1 0.8 26 48 24 46 16 60 0.80 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_7 - 329 NmrA PF05368.8 233 2.7e-09 30.8 0.0 1 1 5.7e-11 4.7e-09 30.0 0.0 1 104 7 126 7 136 0.89 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_11 - 306 NmrA PF05368.8 233 4e-07 23.7 0.2 1 1 1.2e-08 9.9e-07 22.4 0.2 2 219 4 246 3 262 0.74 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_8 - 275 NmrA PF05368.8 233 0.002 11.5 0.0 1 1 4.4e-05 0.0036 10.7 0.0 1 39 3 42 3 59 0.89 # 6225 # 7049 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 3_23 - 372 Septin PF00735.13 281 6.3e-10 32.7 3.3 1 3 2.2e-08 5.6e-06 19.7 0.1 6 34 23 56 19 94 0.69 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_23 - 372 Septin PF00735.13 281 6.3e-10 32.7 3.3 2 3 4.2e-06 0.001 12.3 0.8 95 165 89 159 78 180 0.84 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_23 - 372 Septin PF00735.13 281 6.3e-10 32.7 3.3 3 3 0.032 8 -0.5 0.0 251 277 187 214 173 218 0.81 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 2_49 - 645 AAA_22 PF13401.1 131 2.8e-06 21.7 0.1 1 2 0.00037 0.019 9.3 0.0 3 29 250 276 247 367 0.86 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 2_49 - 645 AAA_22 PF13401.1 131 2.8e-06 21.7 0.1 2 2 0.00041 0.02 9.2 0.1 88 111 497 535 431 548 0.71 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 3_26 - 569 AAA_22 PF13401.1 131 2.9e-05 18.4 0.0 1 1 1.4e-06 7.1e-05 17.2 0.0 5 37 357 383 353 454 0.82 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 2_5 - 282 AAA_22 PF13401.1 131 4.6e-05 17.8 0.6 1 1 2.9e-06 0.00014 16.2 0.6 10 119 36 185 30 195 0.51 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 3_23 - 372 AAA_22 PF13401.1 131 0.00021 15.7 0.3 1 1 4.7e-05 0.0023 12.3 0.5 7 28 24 45 19 151 0.81 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_43 - 176 AAA_22 PF13401.1 131 0.00093 13.6 0.1 1 1 2.7e-05 0.0013 13.0 0.1 7 37 4 43 2 171 0.81 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_14 - 385 DNA_methylase PF00145.12 335 3.1e-73 240.9 0.0 1 1 1.5e-75 3.7e-73 240.7 0.0 2 334 4 345 3 346 0.86 # 15685 # 16839 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.389 1_43 - 176 AAA_17 PF13207.1 121 3.2e-19 64.1 0.1 1 1 6.5e-21 4e-19 63.8 0.1 1 110 3 105 3 149 0.86 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_26 - 569 AAA_17 PF13207.1 121 7.5e-08 27.4 0.1 1 1 3.2e-09 2e-07 26.1 0.1 4 100 361 496 359 543 0.68 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_23 - 372 AAA_17 PF13207.1 121 0.00028 15.9 0.6 1 1 1.1e-05 0.0007 14.6 0.6 2 66 24 100 23 173 0.52 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 2_5 - 282 AAA_17 PF13207.1 121 0.00079 14.5 1.0 1 1 3.3e-05 0.0021 13.1 1.0 6 23 37 54 33 228 0.82 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 2_5 - 282 AAA_21 PF13304.1 303 2e-15 51.7 3.1 1 1 1.7e-15 4.2e-13 44.0 3.1 4 298 35 191 33 193 0.83 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 3_23 - 372 Miro PF08477.8 119 1.4e-07 26.2 0.7 1 1 1.3e-08 1.6e-06 22.8 0.7 2 116 24 144 23 147 0.50 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_43 - 176 Miro PF08477.8 119 0.00041 15.0 0.0 1 1 6e-06 0.00075 14.2 0.0 1 26 3 41 3 115 0.64 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 2_5 - 282 MobB PF03205.9 140 1.9e-05 18.6 0.2 1 1 7.4e-07 4.6e-05 17.3 0.2 3 37 33 66 31 76 0.81 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 3_26 - 569 MobB PF03205.9 140 0.00028 14.8 0.0 1 1 1.1e-05 0.00068 13.6 0.0 4 42 360 397 358 408 0.76 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_23 - 372 MobB PF03205.9 140 0.0011 12.9 0.2 1 1 5.3e-05 0.0033 11.3 0.2 2 19 23 40 22 47 0.88 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_18 - 891 MobB PF03205.9 140 0.0016 12.4 0.1 1 1 6.5e-05 0.004 11.1 0.1 4 34 129 159 128 168 0.92 # 20500 # 23172 # -1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.358 1_7 - 329 Semialdhyde_dh PF01118.19 121 0.00084 13.9 0.0 1 1 2e-05 0.0025 12.4 0.0 2 46 7 50 6 87 0.74 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_8 - 275 Semialdhyde_dh PF01118.19 121 0.0018 12.8 0.0 1 1 2.8e-05 0.0035 11.9 0.0 1 46 2 46 2 79 0.74 # 6225 # 7049 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 2_49 - 645 Arf PF00025.16 175 0.00034 14.1 0.0 1 1 3.4e-06 0.00085 12.8 0.0 8 42 246 279 239 301 0.82 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 3_23 - 372 Ras PF00071.17 162 5.9e-08 26.4 0.1 1 1 7.2e-10 1.8e-07 24.9 0.1 2 59 24 78 23 90 0.90 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_23 - 372 T2SE PF00437.15 272 2.5e-05 17.5 0.4 1 1 4.7e-07 5.8e-05 16.3 0.4 126 149 19 42 2 98 0.86 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_26 - 569 T2SE PF00437.15 272 0.00039 13.5 2.7 1 2 1.3e-05 0.0016 11.5 0.0 114 150 342 378 304 400 0.76 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_26 - 569 T2SE PF00437.15 272 0.00039 13.5 2.7 2 2 0.014 1.7 1.6 0.2 140 165 517 542 506 557 0.86 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 1_43 - 176 SKI PF01202.17 158 2e-06 22.0 0.1 1 1 4.2e-08 1e-05 19.6 0.1 2 107 11 107 10 146 0.69 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_7 - 329 Shikimate_DH PF01488.15 135 0.00087 13.6 0.1 1 1 7.9e-06 0.002 12.5 0.0 11 81 3 70 1 128 0.63 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_43 - 176 Cytidylate_kin2 PF13189.1 179 0.00025 15.2 0.3 1 1 3.1e-06 0.00077 13.6 0.3 2 33 4 35 3 145 0.77 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_26 - 569 Zeta_toxin PF06414.7 201 0.0017 11.7 0.0 1 1 1.4e-05 0.0035 10.6 0.0 21 52 361 393 352 406 0.88 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 1_7 - 329 F420_oxidored PF03807.12 96 0.00043 14.9 0.0 1 1 6.8e-06 0.0017 13.0 0.0 6 62 12 75 6 112 0.78 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 3_9 - 983 SMC_N PF02463.14 220 8e-15 48.8 0.6 1 1 1.8e-16 1.5e-14 47.9 0.6 2 205 3 923 2 933 0.94 # 9216 # 12164 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.308 3_26 - 569 SMC_N PF02463.14 220 7.6e-07 22.7 4.2 1 2 0.0014 0.11 5.8 0.2 27 42 359 374 337 381 0.76 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_26 - 569 SMC_N PF02463.14 220 7.6e-07 22.7 4.2 2 2 2.3e-07 1.9e-05 18.2 0.6 107 209 383 537 373 543 0.87 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 2_5 - 282 SMC_N PF02463.14 220 1.1e-05 19.0 1.4 1 1 8.6e-07 7.2e-05 16.3 1.4 96 216 46 207 7 211 0.76 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 3_23 - 372 Arch_ATPase PF01637.13 234 7.7e-05 16.6 1.5 1 1 1.6e-06 0.0002 15.3 1.5 19 119 20 121 12 173 0.74 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 2_5 - 282 Arch_ATPase PF01637.13 234 0.00028 14.8 0.7 1 1 3.9e-06 0.00048 14.0 0.7 26 116 36 123 26 192 0.76 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 3_23 - 372 AAA_16 PF13191.1 185 1.1e-05 19.7 0.1 1 1 1.6e-07 2e-05 18.8 0.1 24 46 21 43 12 178 0.92 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_26 - 569 AAA_16 PF13191.1 185 1.8e-05 19.0 0.0 1 1 2.4e-07 2.9e-05 18.3 0.0 20 48 352 379 343 415 0.85 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_9 - 983 AAA_23 PF13476.1 202 2e-18 61.6 6.6 1 2 3.2e-20 2e-18 61.6 6.6 1 201 5 231 5 237 0.57 # 9216 # 12164 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.308 3_9 - 983 AAA_23 PF13476.1 202 2e-18 61.6 6.6 2 2 0.023 1.4 3.3 13.3 62 200 431 589 389 600 0.39 # 9216 # 12164 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.308 3_23 - 372 AAA_23 PF13476.1 202 9.5e-05 17.0 10.6 1 1 3.9e-06 0.00024 15.6 10.6 15 163 17 160 3 224 0.60 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 2_5 - 282 AAA_23 PF13476.1 202 0.00093 13.7 6.9 1 1 3.8e-05 0.0024 12.4 6.9 11 68 21 86 5 266 0.59 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 2_46 - 296 AAA_23 PF13476.1 202 0.0031 12.0 13.4 1 1 7e-05 0.0044 11.5 13.4 58 194 131 289 52 294 0.56 # 29583 # 30470 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.349 1_43 - 176 AAA_18 PF13238.1 129 3.8e-09 31.1 1.0 1 1 1.7e-10 1e-08 29.7 0.5 1 116 4 109 4 119 0.68 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_23 - 372 AAA_18 PF13238.1 129 2.5e-05 18.8 0.4 1 1 9e-07 5.6e-05 17.7 0.4 1 73 24 101 24 158 0.73 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_26 - 569 AAA_18 PF13238.1 129 3e-05 18.6 2.3 1 1 7.1e-07 4.4e-05 18.0 0.7 2 23 360 405 359 505 0.68 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 2_5 - 282 AAA_18 PF13238.1 129 0.00012 16.6 1.6 1 1 6.5e-06 0.00041 14.9 1.6 4 40 36 87 34 221 0.84 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 1_7 - 329 adh_short PF00106.20 167 2.2e-09 31.7 0.0 1 1 3.9e-11 3.2e-09 31.1 0.0 1 140 5 130 5 150 0.82 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_11 - 306 adh_short PF00106.20 167 4.5e-08 27.4 0.9 1 1 6.5e-09 5.4e-07 23.9 0.4 3 141 3 121 2 125 0.79 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_8 - 275 adh_short PF00106.20 167 0.0011 13.1 0.0 1 1 9.6e-05 0.0079 10.3 0.0 3 66 3 50 2 107 0.75 # 6225 # 7049 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 3_23 - 372 IIGP PF05049.8 376 1.2e-05 18.4 0.9 1 2 1.1e-07 2.8e-05 17.2 0.1 25 96 11 77 4 96 0.83 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_23 - 372 IIGP PF05049.8 376 1.2e-05 18.4 0.9 2 2 0.036 9 -0.9 0.1 211 281 89 157 85 165 0.63 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_7 - 329 Polysacc_synt_2 PF02719.10 294 3.1e-101 332.3 0.2 1 1 4.6e-103 3.8e-101 332.0 0.2 1 290 7 279 7 283 0.96 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_11 - 306 Polysacc_synt_2 PF02719.10 294 2.4e-22 73.3 0.1 1 1 3.1e-23 2.5e-21 70.0 0.1 2 274 4 273 3 288 0.82 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_14 - 297 Polysacc_synt_2 PF02719.10 294 5.3e-08 26.2 0.0 1 1 1.7e-09 1.4e-07 24.8 0.0 2 246 8 247 7 261 0.72 # 10983 # 11873 # 1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 3_26 - 569 AAA_14 PF13173.1 128 0.0002 15.5 3.2 1 1 2.9e-06 0.00024 15.2 0.1 4 46 358 400 355 464 0.76 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 1_43 - 176 AAA_14 PF13173.1 128 0.00047 14.3 1.5 1 2 2.6e-05 0.0022 12.1 0.1 5 57 4 57 2 94 0.76 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_43 - 176 AAA_14 PF13173.1 128 0.00047 14.3 1.5 2 2 0.066 5.5 1.1 0.3 49 74 117 146 96 170 0.62 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_23 - 372 AAA_14 PF13173.1 128 0.0011 13.0 0.1 1 1 3.6e-05 0.003 11.7 0.1 3 77 22 102 20 150 0.67 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 2_46 - 296 YchF-GTPase_C PF06071.8 84 0.00072 13.6 1.5 1 1 6.1e-06 0.0015 12.5 1.5 17 75 185 245 175 249 0.79 # 29583 # 30470 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.349 3_23 - 372 TIGR03594 TIGR03594 432 2.3e-07 24.0 1.2 1 1 1.7e-09 4.2e-07 23.1 1.2 170 311 16 160 3 175 0.72 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_23 - 372 AAA_29 PF13555.1 62 1.2e-06 22.2 0.0 1 1 5.2e-08 3.2e-06 20.8 0.0 12 43 10 41 4 43 0.83 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_26 - 569 AAA_29 PF13555.1 62 2.6e-06 21.1 0.1 1 1 9.1e-08 5.7e-06 20.0 0.1 16 51 350 384 344 392 0.82 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_9 - 983 AAA_29 PF13555.1 62 2.5e-05 18.0 0.0 1 1 8.7e-07 5.4e-05 16.9 0.0 20 49 23 51 4 62 0.81 # 9216 # 12164 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.308 2_5 - 282 AAA_29 PF13555.1 62 6.6e-05 16.6 0.3 1 1 2.6e-06 0.00016 15.4 0.3 14 40 22 47 19 65 0.82 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 1_51 - 224 Sulfotransfer_2 PF03567.9 253 1e-17 58.8 1.7 1 1 3.9e-19 9.7e-17 55.6 1.7 7 252 2 211 1 212 0.64 # 53511 # 54182 # 1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.315 2_5 - 282 AAA PF00004.24 132 5.3e-06 20.9 0.6 1 1 4.3e-07 2.7e-05 18.6 0.6 3 66 35 158 33 195 0.70 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 2_49 - 645 AAA PF00004.24 132 0.00046 14.6 0.1 1 2 0.0015 0.094 7.1 0.1 2 49 255 298 254 314 0.90 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 2_49 - 645 AAA PF00004.24 132 0.00046 14.6 0.1 2 2 0.011 0.68 4.3 0.0 59 79 506 527 459 558 0.70 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 1_43 - 176 AAA PF00004.24 132 0.00053 14.4 0.1 1 1 1.9e-05 0.0012 13.3 0.1 2 92 5 122 4 139 0.63 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_26 - 569 AAA PF00004.24 132 0.00069 14.0 0.3 1 1 8.1e-05 0.0051 11.2 0.3 3 74 361 502 359 563 0.68 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 1_7 - 329 KR PF08659.5 181 1e-06 22.7 0.0 1 1 3.1e-08 2.6e-06 21.4 0.0 2 135 6 124 6 129 0.72 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_11 - 306 KR PF08659.5 181 1.5e-05 18.9 0.1 1 2 5.7e-05 0.0047 10.8 0.0 4 29 4 30 2 58 0.91 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_11 - 306 KR PF08659.5 181 1.5e-05 18.9 0.1 2 2 0.0025 0.21 5.4 0.0 112 144 92 123 67 127 0.86 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_8 - 275 KR PF08659.5 181 0.0014 12.5 0.0 1 1 2.8e-05 0.0023 11.8 0.0 3 55 3 55 2 67 0.74 # 6225 # 7049 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 3_23 - 372 Sigma54_activat PF00158.21 168 0.00052 13.7 0.0 1 1 4.4e-06 0.0011 12.6 0.0 14 44 13 43 3 66 0.85 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_23 - 372 MMR_HSR1 PF01926.18 116 1.5e-10 35.3 0.4 1 1 2.3e-12 2.9e-10 34.4 0.4 2 115 24 144 23 145 0.70 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 1_43 - 176 MMR_HSR1 PF01926.18 116 0.0018 12.5 0.1 1 1 2.4e-05 0.003 11.7 0.1 1 88 3 95 3 143 0.51 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_26 - 569 DUF258 PF03193.11 161 9e-07 22.4 0.0 1 1 2e-08 1.6e-06 21.6 0.0 12 67 332 388 325 416 0.76 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 2_5 - 282 DUF258 PF03193.11 161 2.6e-06 20.9 0.7 1 1 7.1e-08 5.9e-06 19.7 0.7 17 85 11 80 3 91 0.80 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 3_23 - 372 DUF258 PF03193.11 161 1.1e-05 18.9 0.0 1 1 2.3e-07 2e-05 18.1 0.0 38 63 24 49 4 104 0.80 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 2_54 - 874 TraG-D_C PF12696.2 128 6.1e-36 117.3 0.3 1 1 1.2e-37 3e-35 115.1 0.1 2 127 560 676 559 677 0.86 # 38187 # 40808 # -1 # ID=2_54;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.370 2_49 - 645 NTPase_1 PF03266.10 168 0.00049 14.0 0.0 1 1 1.2e-05 0.0015 12.4 0.0 4 60 256 312 253 348 0.74 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 3_26 - 569 NTPase_1 PF03266.10 168 0.00064 13.7 0.3 1 2 0.00036 0.045 7.6 0.1 2 22 359 378 358 400 0.72 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_26 - 569 NTPase_1 PF03266.10 168 0.00064 13.7 0.3 2 2 0.0058 0.72 3.7 0.0 83 136 474 528 449 549 0.82 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 1_43 - 176 AAA_33 PF13671.1 143 5.2e-07 23.8 0.1 1 1 1.5e-07 9.5e-06 19.7 0.1 2 58 4 61 4 129 0.75 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_26 - 569 AAA_33 PF13671.1 143 0.0009 13.3 0.0 1 1 2.7e-05 0.0017 12.4 0.0 4 22 361 378 359 429 0.77 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_23 - 372 AAA_33 PF13671.1 143 0.0019 12.3 0.3 1 1 0.00014 0.0088 10.1 0.3 2 99 24 165 24 179 0.53 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 2_5 - 282 AAA_33 PF13671.1 143 0.0027 11.8 0.4 1 1 6.9e-05 0.0043 11.1 0.4 4 22 35 53 34 164 0.88 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 1_43 - 176 KTI12 PF08433.5 270 0.00013 15.4 0.1 1 2 1.5e-06 0.00037 13.9 0.0 4 27 4 27 1 69 0.73 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_43 - 176 KTI12 PF08433.5 270 0.00013 15.4 0.1 2 2 0.057 14 -1.1 0.1 242 268 120 145 93 152 0.61 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_26 - 569 AAA_30 PF13604.1 196 0.00071 13.4 0.0 1 1 5e-06 0.0013 12.6 0.0 15 50 354 388 349 438 0.76 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 2_44 - 118 DNA_pol3_delta PF06144.8 172 4.5e-05 17.2 0.5 1 2 1.1e-06 0.00028 14.6 0.0 128 169 13 54 11 56 0.87 # 28787 # 29140 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 2_44 - 118 DNA_pol3_delta PF06144.8 172 4.5e-05 17.2 0.5 2 2 0.019 4.7 0.9 0.1 128 149 58 79 55 97 0.77 # 28787 # 29140 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 3_23 - 372 FtsK_SpoIIIE PF01580.13 205 2e-05 18.3 0.0 1 1 1.5e-07 3.8e-05 17.4 0.0 29 58 11 41 3 47 0.81 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_23 - 372 Dynamin_N PF00350.18 168 3.2e-06 21.2 1.0 1 1 2.8e-08 6.9e-06 20.2 0.9 1 80 24 103 24 154 0.72 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 2_5 - 282 ABC_tran PF00005.22 137 4e-38 125.0 0.3 1 1 5.5e-39 1.9e-37 122.8 0.1 1 137 20 161 20 161 0.99 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 3_26 - 569 ABC_tran PF00005.22 137 7.6e-38 124.1 0.3 1 1 8.5e-39 3e-37 122.2 0.2 1 137 346 497 346 497 0.93 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 2_6 - 343 ABC_tran PF00005.22 137 2.9e-11 38.0 0.0 1 1 2e-12 7.1e-11 36.8 0.0 2 134 20 154 19 156 0.94 # 4628 # 5656 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.301 3_23 - 372 ABC_tran PF00005.22 137 0.0002 15.9 2.1 1 1 1.5e-05 0.00054 14.5 2.2 14 51 24 57 18 175 0.59 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_9 - 983 ABC_tran PF00005.22 137 0.00039 14.9 0.1 1 1 1.1e-05 0.00039 14.9 0.1 6 102 20 150 16 179 0.69 # 9216 # 12164 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.308 1_43 - 176 ABC_tran PF00005.22 137 0.0012 13.3 0.0 1 1 5.2e-05 0.0018 12.8 0.0 13 67 3 57 2 133 0.71 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 2_49 - 645 ABC_tran PF00005.22 137 0.002 12.6 1.4 1 1 0.00016 0.0058 11.1 0.1 13 80 253 346 247 431 0.64 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 2_5 - 282 TIGR03263 TIGR03263 180 0.0011 12.5 0.2 1 2 0.00037 0.093 6.2 0.1 7 24 36 53 30 72 0.83 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 2_5 - 282 TIGR03263 TIGR03263 180 0.0011 12.5 0.2 2 2 0.0025 0.61 3.6 0.0 81 118 225 262 221 274 0.83 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 1_11 - 306 NAD_binding_4 PF07993.7 249 7.6e-22 71.6 0.1 1 2 4.4e-07 3.6e-05 16.9 0.0 1 25 5 29 5 35 0.90 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_11 - 306 NAD_binding_4 PF07993.7 249 7.6e-22 71.6 0.1 2 2 8.6e-18 7.2e-16 52.0 0.0 84 247 62 217 51 220 0.84 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_7 - 329 NAD_binding_4 PF07993.7 249 2.2e-16 53.7 0.0 1 1 2.3e-15 1.9e-13 44.0 0.0 1 144 9 135 9 212 0.79 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_14 - 297 NAD_binding_4 PF07993.7 249 0.00028 14.0 0.1 1 2 0.022 1.9 1.5 0.1 1 21 9 29 9 66 0.72 # 10983 # 11873 # 1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 1_14 - 297 NAD_binding_4 PF07993.7 249 0.00028 14.0 0.1 2 2 5.2e-05 0.0043 10.1 0.0 153 242 119 207 86 214 0.66 # 10983 # 11873 # 1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 3_26 - 569 AAA_19 PF13245.1 76 3.3e-05 17.8 0.0 1 1 2.9e-07 7.2e-05 16.7 0.0 8 37 354 382 350 411 0.84 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 1_8 - 275 RmlD_sub_bind PF04321.12 287 1.5e-32 106.8 0.0 1 1 3e-34 1.8e-32 106.5 0.0 1 240 1 237 1 249 0.93 # 6225 # 7049 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 1_11 - 306 RmlD_sub_bind PF04321.12 287 7.7e-28 91.3 0.0 1 1 1.5e-29 9.5e-28 91.0 0.0 1 223 1 244 1 292 0.89 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_7 - 329 RmlD_sub_bind PF04321.12 287 3.5e-16 53.1 0.0 1 1 2e-16 1.2e-14 48.0 0.0 2 157 6 172 5 194 0.82 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_14 - 297 RmlD_sub_bind PF04321.12 287 1.1e-07 25.2 0.0 1 1 2.7e-09 1.7e-07 24.6 0.0 3 89 7 104 5 114 0.94 # 10983 # 11873 # 1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 1_7 - 329 NAD_binding_10 PF13460.1 183 1.5e-13 45.3 0.0 1 1 3.5e-15 2.1e-13 44.8 0.0 1 102 7 129 7 189 0.81 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_11 - 306 NAD_binding_10 PF13460.1 183 3.9e-12 40.7 0.0 1 1 1.6e-13 9.7e-12 39.4 0.0 2 180 4 222 4 225 0.71 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_8 - 275 NAD_binding_10 PF13460.1 183 2.6e-06 21.7 0.0 1 1 5.3e-08 3.3e-06 21.4 0.0 1 125 3 136 3 157 0.70 # 6225 # 7049 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 1_14 - 297 NAD_binding_10 PF13460.1 183 3e-05 18.3 0.0 1 1 6.4e-07 4e-05 17.9 0.0 2 150 8 168 7 198 0.78 # 10983 # 11873 # 1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 2_49 - 645 AAA_10 PF12846.2 304 1.6e-64 212.4 0.5 1 1 4.3e-66 2.7e-64 211.7 0.5 1 300 251 597 251 603 0.91 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 2_5 - 282 AAA_10 PF12846.2 304 5.9e-06 20.1 0.1 1 1 3.6e-07 2.3e-05 18.1 0.0 6 37 35 66 31 84 0.92 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 3_23 - 372 AAA_10 PF12846.2 304 4e-05 17.3 1.5 1 1 1.5e-06 9.5e-05 16.1 0.6 2 24 22 44 21 76 0.84 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 3_26 - 569 AAA_10 PF12846.2 304 0.00019 15.1 0.0 1 1 9e-06 0.00056 13.6 0.0 4 34 359 389 357 407 0.86 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_26 - 569 SbcCD_C PF13558.1 90 0.0018 12.4 0.3 1 1 9.1e-05 0.023 8.9 0.3 62 87 485 510 439 513 0.75 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 1_11 - 306 3Beta_HSD PF01073.14 280 5.6e-30 98.1 0.1 1 1 6.1e-32 7.6e-30 97.7 0.1 1 232 4 226 4 239 0.83 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_7 - 329 3Beta_HSD PF01073.14 280 2.3e-28 92.8 0.1 1 1 1.2e-27 1.5e-25 83.6 0.1 1 122 8 131 8 193 0.82 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_11 - 306 ThiF PF00899.16 136 0.0016 12.4 0.8 1 1 1.1e-05 0.0026 11.8 0.1 5 53 4 52 1 123 0.76 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 2_49 - 645 ResIII PF04851.10 184 0.00033 14.7 2.1 1 2 0.089 22 -1.0 0.3 81 131 86 136 75 196 0.73 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 2_49 - 645 ResIII PF04851.10 184 0.00033 14.7 2.1 2 2 1.9e-06 0.00046 14.2 0.1 108 164 447 525 416 582 0.76 # 32193 # 34127 # -1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.391 2_42 - 146 TIGR00019 TIGR00019 361 0.00049 12.9 3.2 1 1 3.2e-06 0.0008 12.2 3.2 32 102 17 87 2 91 0.80 # 27154 # 27591 # -1 # ID=2_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.358 1_43 - 176 PduV-EutP PF10662.4 143 0.00017 15.3 0.0 1 1 1.3e-06 0.00032 14.4 0.0 1 24 1 24 1 31 0.90 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_11 - 306 Epimerase PF01370.16 236 2.5e-62 204.5 0.1 1 1 5.4e-64 3.3e-62 204.1 0.1 2 230 4 228 3 240 0.93 # 8513 # 9430 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.366 1_14 - 297 Epimerase PF01370.16 236 2.3e-38 126.1 0.0 1 1 5e-40 3.1e-38 125.7 0.0 2 235 8 229 7 230 0.92 # 10983 # 11873 # 1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.360 1_7 - 329 Epimerase PF01370.16 236 1.6e-28 93.9 0.0 1 1 3.1e-29 1.9e-27 90.4 0.0 1 223 7 212 7 223 0.90 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_8 - 275 Epimerase PF01370.16 236 6.3e-19 62.5 0.0 1 1 1.5e-20 9.4e-19 61.9 0.0 1 150 3 141 3 147 0.90 # 6225 # 7049 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.337 3_23 - 372 DUF815 PF05673.8 250 0.0016 11.6 0.0 1 1 1.1e-05 0.0028 10.8 0.0 55 75 23 43 14 67 0.85 # 26879 # 27994 # 1 # ID=3_23;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356 2_54 - 874 TrwB_AAD_bind PF10412.4 386 6e-17 55.4 0.0 1 2 0.001 0.26 4.0 0.0 20 140 186 326 176 345 0.63 # 38187 # 40808 # -1 # ID=2_54;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.370 2_54 - 874 TrwB_AAD_bind PF10412.4 386 6e-17 55.4 0.0 2 2 1.8e-17 4.5e-15 49.3 0.0 233 374 548 685 467 697 0.83 # 38187 # 40808 # -1 # ID=2_54;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.370 2_5 - 282 AAA_11 PF13086.1 236 0.0013 12.5 0.1 1 1 7.3e-06 0.0018 12.0 0.1 22 76 35 129 20 255 0.65 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 2_54 - 874 T4SS-DNA_transf PF02534.9 469 1.2e-48 159.9 1.1 1 2 1.7e-23 4.1e-21 69.2 0.1 48 269 185 423 151 432 0.79 # 38187 # 40808 # -1 # ID=2_54;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.370 2_54 - 874 T4SS-DNA_transf PF02534.9 469 1.2e-48 159.9 1.1 2 2 1.4e-29 3.6e-27 89.2 0.1 259 432 513 683 484 696 0.85 # 38187 # 40808 # -1 # ID=2_54;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.370 1_7 - 329 TrkA_N PF02254.13 116 0.00059 14.0 0.0 1 1 5.8e-06 0.0015 12.8 0.0 5 58 12 71 7 77 0.84 # 5238 # 6224 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.333 1_43 - 176 AAA_24 PF13479.1 213 0.00016 15.5 0.2 1 2 3.1e-06 0.00078 13.2 0.0 4 31 2 29 1 82 0.86 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_43 - 176 AAA_24 PF13479.1 213 0.00016 15.5 0.2 2 2 0.028 6.9 0.3 0.0 167 209 86 125 76 129 0.69 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_43 - 176 AAA_28 PF13521.1 163 1.4e-05 19.3 0.1 1 1 2.8e-07 2.4e-05 18.6 0.1 1 25 3 28 3 71 0.77 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_26 - 569 AAA_28 PF13521.1 163 0.00039 14.6 0.0 1 1 9.5e-06 0.00079 13.6 0.0 4 25 361 382 359 403 0.87 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 2_5 - 282 AAA_28 PF13521.1 163 0.0011 13.2 0.2 1 1 2e-05 0.0017 12.5 0.2 4 41 35 78 32 166 0.83 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 1_44 - 1442 TOBE_2 PF08402.5 75 0.00097 13.3 0.1 1 3 0.037 9.2 0.6 0.0 6 53 508 555 505 564 0.79 # 35112 # 39437 # -1 # ID=1_44;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.399 1_44 - 1442 TOBE_2 PF08402.5 75 0.00097 13.3 0.1 2 3 0.0049 1.2 3.4 0.0 5 37 871 903 868 922 0.79 # 35112 # 39437 # -1 # ID=1_44;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.399 1_44 - 1442 TOBE_2 PF08402.5 75 0.00097 13.3 0.1 3 3 0.024 6 1.2 0.0 14 37 969 994 961 1006 0.85 # 35112 # 39437 # -1 # ID=1_44;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.399 1_51 - 224 Gal-3-0_sulfotr PF06990.6 402 7.9e-09 28.8 1.8 1 2 7.1e-05 0.018 7.9 2.3 69 173 6 99 2 121 0.76 # 53511 # 54182 # 1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.315 1_51 - 224 Gal-3-0_sulfotr PF06990.6 402 7.9e-09 28.8 1.8 2 2 5.9e-09 1.5e-06 21.3 0.3 166 313 75 221 69 223 0.71 # 53511 # 54182 # 1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.315 3_26 - 569 AAA_5 PF07728.9 139 0.00011 16.1 0.1 1 2 0.048 6 0.8 0.0 71 98 295 319 281 339 0.77 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 3_26 - 569 AAA_5 PF07728.9 139 0.00011 16.1 0.1 2 2 1.5e-05 0.0019 12.1 0.0 2 29 359 387 358 413 0.83 # 31821 # 33527 # -1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.281 2_5 - 282 AAA_5 PF07728.9 139 0.0021 12.0 0.2 1 1 9.2e-05 0.011 9.6 0.2 5 60 36 96 33 168 0.74 # 3587 # 4432 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.335 1_43 - 176 APS_kinase PF01583.15 157 0.00088 13.1 0.0 1 1 8.2e-06 0.002 12.0 0.0 5 27 4 26 2 34 0.87 # 34432 # 34959 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/89cd7d42-f974-405d-b4ea-b57711c4724d # Target file: checkm_output/bins/pGCA_002688605.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002688605.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/89cd7d42-f974-405d-b4ea-b57711c4724d checkm_output/bins/pGCA_002688605.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:50:11 2020 # [ok]