# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_28 - 489 Mg_chelatase PF01078.16 207 2.8e-05 15.1 0.0 1 2 0.0005 0.022 5.6 0.0 24 116 33 130 10 148 0.66 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Mg_chelatase PF01078.16 207 2.8e-05 15.1 0.0 2 2 0.00036 0.016 6.1 0.0 4 43 306 345 303 375 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 cobW PF02492.14 178 4.4e-07 21.2 0.1 1 2 4.6e-05 0.002 9.3 0.1 4 25 35 56 33 86 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 cobW PF02492.14 178 4.4e-07 21.2 0.1 2 2 5.9e-05 0.0026 9.0 0.0 4 22 328 346 326 360 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Thymidylate_kin PF02223.12 186 0.081 4.0 13.4 1 2 0.00025 0.011 6.8 0.3 3 23 38 58 37 66 0.88 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Thymidylate_kin PF02223.12 186 0.081 4.0 13.4 2 2 0.0012 0.053 4.6 0.0 3 21 331 349 329 356 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_ATPase PF09818.4 448 0.015 5.5 13.2 1 3 0.00097 0.043 4.0 0.2 249 266 36 53 32 57 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_ATPase PF09818.4 448 0.015 5.5 13.2 2 3 0.043 1.9 -1.4 0.0 319 349 99 129 96 132 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_ATPase PF09818.4 448 0.015 5.5 13.2 3 3 0.00013 0.0055 7.0 0.1 242 265 321 345 315 350 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 FeoB_N PF02421.13 156 3.9e-06 18.0 0.6 1 2 8.7e-05 0.0038 8.2 0.1 2 23 33 54 32 61 0.90 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 FeoB_N PF02421.13 156 3.9e-06 18.0 0.6 2 2 0.00014 0.0061 7.6 0.0 2 21 326 345 325 357 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 IstB_IS21 PF01695.12 178 1.1e-07 23.2 0.1 1 2 0.0001 0.0044 8.2 0.0 42 70 26 54 3 82 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 IstB_IS21 PF01695.12 178 1.1e-07 23.2 0.1 2 2 9.5e-06 0.00042 11.5 0.0 46 70 323 347 307 366 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 3HCDH_N PF02737.13 180 1.1e-05 17.0 0.1 1 1 2.4e-07 1.1e-05 17.0 0.1 2 85 253 339 252 341 0.81 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 GIDA PF01134.17 392 1.7e-06 18.8 5.2 1 3 3.9e-08 1.7e-06 18.8 5.2 1 150 87 222 87 255 0.69 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 GIDA PF01134.17 392 1.7e-06 18.8 5.2 2 3 0.012 0.51 0.8 0.8 98 170 294 369 285 385 0.57 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 GIDA PF01134.17 392 1.7e-06 18.8 5.2 3 3 0.019 0.85 0.0 0.1 346 384 371 410 366 417 0.67 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 Pyr_redox_2 PF07992.9 201 1.5e-41 134.2 0.0 1 1 8.3e-43 3.6e-41 133.0 0.0 1 197 87 390 87 394 0.93 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 NB-ARC PF00931.17 287 9.2e-10 29.5 0.2 1 2 5.8e-06 0.00025 11.6 0.0 18 119 30 136 21 149 0.73 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NB-ARC PF00931.17 287 9.2e-10 29.5 0.2 2 2 5.7e-07 2.5e-05 14.9 0.1 22 46 327 352 311 484 0.62 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_24 - 324 NmrA PF05368.8 233 6e-06 17.4 0.6 1 1 3.2e-07 1.4e-05 16.1 0.6 1 52 152 205 152 264 0.90 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_28 - 489 Septin PF00735.13 281 2.2e-05 15.3 2.1 1 3 0.00017 0.0074 7.0 0.1 7 38 34 64 29 102 0.75 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Septin PF00735.13 281 2.2e-05 15.3 2.1 2 3 0.075 3.3 -1.7 0.5 89 103 198 212 162 225 0.57 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Septin PF00735.13 281 2.2e-05 15.3 2.1 3 3 0.00024 0.011 6.5 0.0 6 27 326 347 323 368 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_22 PF13401.1 131 2.5e-13 42.1 2.9 1 2 3.8e-06 8.3e-05 14.5 0.0 7 107 34 143 32 158 0.61 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_22 PF13401.1 131 2.5e-13 42.1 2.9 2 2 6.5e-10 1.4e-08 26.7 0.0 5 120 325 460 319 470 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 AAA_22 PF13401.1 131 2.8e-07 22.5 0.0 1 2 1.6e-07 3.4e-06 19.0 0.0 4 87 264 341 259 354 0.82 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_1 - 726 AAA_22 PF13401.1 131 2.8e-07 22.5 0.0 2 2 0.083 1.8 0.5 0.0 76 101 602 629 537 660 0.62 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_28 - 489 ATP_bind_1 PF03029.12 238 2.6e-05 15.6 1.1 1 4 0.0013 0.057 4.6 0.0 2 28 37 63 36 81 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ATP_bind_1 PF03029.12 238 2.6e-05 15.6 1.1 2 4 0.03 1.3 0.2 0.1 63 119 248 305 192 315 0.77 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ATP_bind_1 PF03029.12 238 2.6e-05 15.6 1.1 3 4 0.00042 0.019 6.2 0.0 2 23 330 351 329 392 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ATP_bind_1 PF03029.12 238 2.6e-05 15.6 1.1 4 4 0.069 3 -1.0 0.0 134 168 432 466 416 481 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SRP54 PF00448.17 196 2.6e-05 15.4 8.6 1 2 3e-05 0.0013 9.9 0.4 3 28 33 58 31 67 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SRP54 PF00448.17 196 2.6e-05 15.4 8.6 2 2 2.7e-05 0.0012 10.1 0.0 3 23 326 346 324 374 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 NAD_binding_7 PF13241.1 103 4.1e-05 15.6 0.1 1 2 0.00053 0.023 6.7 0.0 10 38 88 116 84 177 0.90 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 NAD_binding_7 PF13241.1 103 4.1e-05 15.6 0.1 2 2 0.00075 0.033 6.3 0.0 8 45 251 307 244 360 0.56 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 AAA_17 PF13207.1 121 1e-09 31.0 0.8 1 2 8e-06 0.00018 14.1 0.7 1 23 33 55 33 244 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_17 PF13207.1 121 1e-09 31.0 0.8 2 2 2.5e-05 0.00054 12.5 0.0 2 20 327 345 326 448 0.66 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 4_1 - 225 AAA_17 PF13207.1 121 4.4e-06 19.3 1.4 1 1 3e-07 6.5e-06 18.8 1.4 23 113 24 122 20 206 0.85 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_28 - 489 AAA_21 PF13304.1 303 5.8e-20 64.1 8.3 1 4 8.1e-06 0.00035 12.3 1.1 3 19 35 51 34 57 0.92 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_21 PF13304.1 303 5.8e-20 64.1 8.3 2 4 4.2e-08 1.8e-06 19.8 0.0 236 303 102 163 67 163 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_21 PF13304.1 303 5.8e-20 64.1 8.3 3 4 3.2e-08 1.4e-06 20.1 0.0 3 21 328 346 327 363 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_21 PF13304.1 303 5.8e-20 64.1 8.3 4 4 4.9e-06 0.00022 13.0 0.2 232 302 405 469 360 470 0.70 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Miro PF08477.8 119 5.1e-11 34.9 0.1 1 2 1.3e-07 3e-06 19.5 0.0 1 49 33 80 33 104 0.76 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Miro PF08477.8 119 5.1e-11 34.9 0.1 2 2 5.8e-05 0.0013 11.0 0.0 2 20 327 345 326 365 0.88 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 Miro PF08477.8 119 0.00023 13.4 1.2 1 1 5.7e-05 0.0013 11.1 0.1 3 34 268 299 267 400 0.78 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_28 - 489 MobB PF03205.9 140 3.6e-08 25.0 0.8 1 2 2e-05 0.0009 10.7 0.2 3 28 34 59 33 70 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 MobB PF03205.9 140 3.6e-08 25.0 0.8 2 2 9.6e-06 0.00042 11.8 0.0 3 24 327 348 325 357 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_24 - 324 ADH_zinc_N PF00107.21 130 2.2e-17 54.6 0.0 1 1 1.1e-18 4.9e-17 53.5 0.0 1 114 160 267 160 285 0.91 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_28 - 489 Arf PF00025.16 175 0.00019 12.5 1.8 1 2 0.00011 0.005 7.8 0.0 16 40 33 57 22 81 0.77 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Arf PF00025.16 175 0.00019 12.5 1.8 2 2 0.0045 0.2 2.6 0.0 16 35 326 345 314 372 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Ras PF00071.17 162 4e-06 18.0 3.4 1 2 1.6e-05 0.00035 11.7 0.1 1 44 33 77 33 86 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Ras PF00071.17 162 4e-06 18.0 3.4 2 2 0.00098 0.021 5.9 0.0 2 18 327 343 326 378 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 Ras PF00071.17 162 0.00032 11.9 2.3 1 1 2.9e-05 0.00063 10.9 0.0 3 35 268 299 267 317 0.88 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_28 - 489 AFG1_ATPase PF03969.11 362 3.4e-05 14.4 10.4 1 3 0.0014 0.062 3.7 0.0 67 135 36 128 28 141 0.66 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AFG1_ATPase PF03969.11 362 3.4e-05 14.4 10.4 2 3 0.066 2.9 -1.8 8.1 5 49 186 230 183 253 0.71 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AFG1_ATPase PF03969.11 362 3.4e-05 14.4 10.4 3 3 1.2e-05 0.00052 10.6 0.0 47 88 308 350 265 383 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 T2SE PF00437.15 272 1.6e-07 22.1 2.7 1 2 4.4e-06 0.00019 12.1 0.0 131 170 34 70 25 93 0.77 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 T2SE PF00437.15 272 1.6e-07 22.1 2.7 2 2 2.6e-05 0.0011 9.5 0.7 115 153 311 349 188 354 0.66 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SMC_N PF02463.14 220 1.6e-13 42.1 10.5 1 4 0.00069 0.031 5.2 0.0 26 44 33 51 14 54 0.76 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SMC_N PF02463.14 220 1.6e-13 42.1 10.5 2 4 2.6e-06 0.00011 13.1 0.0 133 208 99 169 67 179 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SMC_N PF02463.14 220 1.6e-13 42.1 10.5 3 4 4.9e-06 0.00021 12.3 0.0 24 46 325 346 306 375 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SMC_N PF02463.14 220 1.6e-13 42.1 10.5 4 4 3.9e-07 1.7e-05 15.9 0.1 110 186 377 455 363 480 0.79 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Arch_ATPase PF01637.13 234 8.8e-08 23.8 5.2 1 3 7e-05 0.0031 8.9 0.0 24 147 35 147 22 157 0.57 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Arch_ATPase PF01637.13 234 8.8e-08 23.8 5.2 2 3 0.021 0.91 0.8 1.5 51 101 186 236 160 277 0.51 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Arch_ATPase PF01637.13 234 8.8e-08 23.8 5.2 3 3 2.4e-06 0.00011 13.7 0.0 25 101 329 410 321 479 0.73 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_16 PF13191.1 185 9.2e-11 33.8 1.4 1 3 6.8e-05 0.003 9.3 0.0 27 52 34 61 28 100 0.73 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_16 PF13191.1 185 9.2e-11 33.8 1.4 2 3 0.025 1.1 0.9 1.4 48 130 172 249 159 284 0.53 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_16 PF13191.1 185 9.2e-11 33.8 1.4 3 3 4.2e-08 1.8e-06 19.8 0.0 12 51 313 351 310 425 0.74 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_23 PF13476.1 202 9.4e-07 21.1 26.4 1 1 1.6e-07 7.1e-06 18.2 0.0 22 40 327 345 310 435 0.91 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_18 PF13238.1 129 1.7e-07 23.3 3.9 1 2 1.6e-05 0.00069 11.7 0.3 1 42 34 81 34 167 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_18 PF13238.1 129 1.7e-07 23.3 3.9 2 2 1.5e-05 0.00067 11.7 0.0 1 23 327 359 327 469 0.76 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_14 PF13173.1 128 1.1e-09 30.1 4.5 1 2 2.4e-05 0.00052 11.7 0.3 4 42 33 81 30 174 0.57 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_14 PF13173.1 128 1.1e-09 30.1 4.5 2 2 6.4e-07 1.4e-05 16.8 0.1 2 57 324 382 323 484 0.67 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 AAA_14 PF13173.1 128 0.018 6.7 12.2 1 2 3.2e-05 0.0007 11.3 0.3 4 72 266 335 263 384 0.65 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_1 - 726 AAA_14 PF13173.1 128 0.018 6.7 12.2 2 2 0.02 0.43 2.3 0.4 21 72 573 624 546 659 0.63 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 2_7 - 548 HI0933_like PF03486.9 409 8.3e-09 26.0 4.6 1 3 3.4e-06 0.00015 12.0 1.4 1 34 86 119 86 127 0.89 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 HI0933_like PF03486.9 409 8.3e-09 26.0 4.6 2 3 0.052 2.3 -1.8 0.0 144 165 203 223 195 230 0.80 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 HI0933_like PF03486.9 409 8.3e-09 26.0 4.6 3 3 9.3e-07 4.1e-05 13.9 0.0 75 165 258 349 239 354 0.82 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 TIGR03594 TIGR03594 432 0.0088 6.4 10.7 1 2 0.00012 0.0055 7.1 0.0 177 199 33 55 12 62 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03594 TIGR03594 432 0.0088 6.4 10.7 2 2 0.00069 0.03 4.6 0.0 2 23 326 347 325 352 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_29 PF13555.1 62 3.7e-11 34.2 0.0 1 2 1e-05 0.00045 11.5 0.0 25 41 33 49 22 53 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_29 PF13555.1 62 3.7e-11 34.2 0.0 2 2 2.8e-08 1.3e-06 19.7 0.0 17 43 319 344 312 347 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 FAD_binding_2 PF00890.19 417 3.8e-09 27.5 7.0 1 3 4.8e-10 2.1e-08 25.1 2.7 1 36 87 121 87 128 0.91 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 FAD_binding_2 PF00890.19 417 3.8e-09 27.5 7.0 2 3 0.0019 0.085 3.3 0.1 141 204 291 351 251 366 0.76 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 FAD_binding_2 PF00890.19 417 3.8e-09 27.5 7.0 3 3 0.08 3.5 -2.0 0.0 374 402 360 390 356 397 0.77 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 AAA PF00004.24 132 2.5e-09 29.2 0.6 1 2 1.3e-06 5.9e-05 15.1 0.0 2 28 35 61 34 138 0.62 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA PF00004.24 132 2.5e-09 29.2 0.6 2 2 1.8e-05 0.00077 11.4 0.0 2 23 328 349 327 396 0.79 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Bac_DnaA PF00308.13 219 1.1e-05 16.8 0.1 1 2 0.00062 0.027 5.8 0.1 30 59 27 56 10 70 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Bac_DnaA PF00308.13 219 1.1e-05 16.8 0.1 2 2 0.00011 0.0049 8.2 0.0 39 68 329 358 324 374 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 Thi4 PF01946.12 230 0.00017 12.5 0.2 1 1 9.7e-06 0.00043 11.1 0.2 17 56 85 123 74 140 0.80 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 Sigma54_activat PF00158.21 168 9.8e-06 16.9 0.1 1 2 0.00097 0.043 5.0 0.0 23 52 32 61 12 76 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Sigma54_activat PF00158.21 168 9.8e-06 16.9 0.1 2 2 5.4e-05 0.0024 9.1 0.0 9 46 311 348 305 362 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 Pyr_redox_3 PF13738.1 203 2.1e-16 52.3 0.5 1 2 5.2e-13 2.3e-11 35.9 0.0 1 200 89 283 89 286 0.63 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 Pyr_redox_3 PF13738.1 203 2.1e-16 52.3 0.5 2 2 2e-06 8.6e-05 14.4 0.1 82 147 291 357 287 390 0.70 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 MMR_HSR1 PF01926.18 116 1.2e-09 29.9 1.5 1 2 3.2e-07 1.4e-05 16.8 0.2 1 91 33 159 33 191 0.72 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 MMR_HSR1 PF01926.18 116 1.2e-09 29.9 1.5 2 2 3.9e-05 0.0017 10.1 0.0 2 21 327 346 326 359 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 DUF258 PF03193.11 161 7.9e-10 29.9 0.1 1 2 2.5e-06 0.00011 13.2 0.0 36 67 32 63 1 73 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 DUF258 PF03193.11 161 7.9e-10 29.9 0.1 2 2 1.1e-06 4.8e-05 14.3 0.0 20 58 308 347 290 436 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NTPase_1 PF03266.10 168 2.1e-06 19.3 1.6 1 2 0.00025 0.011 7.2 0.8 2 26 34 58 33 66 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NTPase_1 PF03266.10 168 2.1e-06 19.3 1.6 2 2 3.2e-05 0.0014 10.1 0.0 2 24 327 349 326 355 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_33 PF13671.1 143 1.6e-07 23.1 0.3 1 2 2.6e-05 0.0011 10.6 0.0 3 38 35 75 34 103 0.79 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_33 PF13671.1 143 1.6e-07 23.1 0.3 2 2 6.3e-05 0.0028 9.3 0.0 2 22 327 347 327 397 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 2-Hacid_dh_C PF02826.14 178 0.00029 11.7 0.3 1 3 0.077 3.4 -1.5 0.0 38 67 87 116 57 127 0.86 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 2-Hacid_dh_C PF02826.14 178 0.00029 11.7 0.3 2 3 4.5e-05 0.002 9.0 0.0 37 70 251 284 237 304 0.83 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 2-Hacid_dh_C PF02826.14 178 0.00029 11.7 0.3 3 3 0.065 2.9 -1.3 0.0 47 108 293 355 291 373 0.62 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 XdhC_C PF13478.1 136 8.2e-05 14.7 0.0 1 1 4.7e-06 0.00021 13.4 0.0 1 49 253 302 253 321 0.79 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 AAA_30 PF13604.1 196 1.1e-05 16.8 4.0 1 2 3.4e-05 0.0015 9.9 0.0 22 49 35 62 25 113 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_30 PF13604.1 196 1.1e-05 16.8 4.0 2 2 0.00032 0.014 6.7 0.0 22 43 328 349 320 375 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 FtsK_SpoIIIE PF01580.13 205 2e-05 15.9 0.2 1 2 0.00092 0.04 5.1 0.0 40 59 33 52 12 58 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 FtsK_SpoIIIE PF01580.13 205 2e-05 15.9 0.2 2 2 0.00011 0.0049 8.1 0.0 28 58 314 344 298 348 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Dynamin_N PF00350.18 168 0.0087 7.6 18.7 1 1 0.00026 0.011 7.2 0.0 1 20 327 346 327 350 0.93 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 Lycopene_cycl PF05834.7 374 3.1e-05 14.7 1.0 1 2 0.00031 0.014 6.0 0.4 1 33 87 117 87 120 0.91 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 Lycopene_cycl PF05834.7 374 3.1e-05 14.7 1.0 2 2 0.00016 0.0069 7.0 0.0 64 143 273 351 268 372 0.81 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 ABC_tran PF00005.22 137 7.1e-41 131.5 12.1 1 4 1.3e-12 5.6e-11 34.7 0.3 8 44 28 64 21 85 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_tran PF00005.22 137 7.1e-41 131.5 12.1 2 4 3.7e-10 1.6e-08 26.7 0.0 105 137 99 131 69 131 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_tran PF00005.22 137 7.1e-41 131.5 12.1 3 4 0.0022 0.097 4.7 2.3 38 92 174 271 161 306 0.67 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_tran PF00005.22 137 7.1e-41 131.5 12.1 4 4 6.8e-23 3e-21 67.9 0.1 1 137 314 438 314 438 0.75 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 K_oxygenase PF13434.1 341 3.3e-10 31.1 1.5 1 3 0.0086 0.38 1.3 0.0 3 25 86 108 85 118 0.82 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 K_oxygenase PF13434.1 341 3.3e-10 31.1 1.5 2 3 8.3e-09 3.6e-07 21.0 0.0 140 232 205 290 190 302 0.83 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 K_oxygenase PF13434.1 341 3.3e-10 31.1 1.5 3 3 0.00033 0.014 5.9 0.2 119 160 310 351 294 385 0.66 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 TIGR03263 TIGR03263 180 0.012 6.7 8.9 1 4 0.0032 0.14 3.2 0.1 6 25 36 55 32 64 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03263 TIGR03263 180 0.012 6.7 8.9 2 4 0.04 1.8 -0.4 0.8 87 151 161 219 141 230 0.58 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03263 TIGR03263 180 0.012 6.7 8.9 3 4 0.078 3.5 -1.3 0.1 130 149 253 272 224 285 0.67 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03263 TIGR03263 180 0.012 6.7 8.9 4 4 0.00037 0.016 6.2 0.0 4 31 327 354 324 361 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ATP-synt_ab PF00006.20 215 1.8e-06 19.3 0.1 1 2 3.9e-05 0.0017 9.6 0.0 16 44 32 60 28 271 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ATP-synt_ab PF00006.20 215 1.8e-06 19.3 0.1 2 2 0.00014 0.006 7.8 0.0 13 39 322 348 315 363 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 UDPG_MGDP_dh_N PF03721.9 185 4.7e-05 14.6 0.0 1 1 2.5e-06 0.00011 13.4 0.0 2 39 252 289 251 354 0.75 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 RuvB_N PF05496.7 234 0.00022 12.0 0.1 1 2 0.00027 0.012 6.3 0.0 51 75 32 56 22 67 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 RuvB_N PF05496.7 234 0.00022 12.0 0.1 2 2 0.0034 0.15 2.8 0.0 53 74 327 348 320 358 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_19 PF13245.1 76 4.4e-07 21.4 0.0 1 2 4.4e-06 0.0002 12.9 0.0 14 33 35 53 30 60 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_19 PF13245.1 76 4.4e-07 21.4 0.0 2 2 0.0011 0.05 5.2 0.0 13 35 328 348 319 386 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_24 - 324 NAD_binding_10 PF13460.1 183 8.6e-06 17.6 0.1 1 1 2.8e-07 1.2e-05 17.1 0.1 1 38 152 192 152 222 0.86 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_28 - 489 AAA_10 PF12846.2 304 2.9e-07 21.9 0.6 1 2 1.5e-05 0.00032 11.9 0.1 5 160 35 217 33 246 0.65 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_10 PF12846.2 304 2.9e-07 21.9 0.6 2 2 0.0003 0.0066 7.6 0.0 2 24 325 347 324 350 0.88 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 AAA_10 PF12846.2 304 3.9e-06 18.2 1.9 1 1 2.6e-06 5.6e-05 14.4 1.9 5 263 268 656 266 666 0.58 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_28 - 489 SbcCD_C PF13558.1 90 0.00024 12.8 7.3 1 2 0.0048 0.21 3.4 0.1 30 77 100 134 94 146 0.58 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SbcCD_C PF13558.1 90 0.00024 12.8 7.3 2 2 3.8e-05 0.0017 10.1 0.1 23 84 400 448 367 454 0.71 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 FAD_oxidored PF12831.2 428 1.3e-12 39.2 1.3 1 2 1.3e-09 5.6e-08 23.9 0.3 1 45 87 130 87 195 0.80 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 FAD_oxidored PF12831.2 428 1.3e-12 39.2 1.3 2 2 1.1e-06 5e-05 14.2 0.0 78 147 281 347 240 349 0.74 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 DAO PF01266.19 358 2.5e-08 24.8 0.7 1 2 1e-06 4.5e-05 14.1 0.1 1 35 87 121 87 223 0.79 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 DAO PF01266.19 358 2.5e-08 24.8 0.7 2 2 3.3e-05 0.0014 9.2 0.1 152 205 296 352 253 444 0.78 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 DUF3584 PF12128.3 1201 0.025 3.5 24.7 1 3 0.0017 0.076 1.9 0.4 21 37 35 51 31 52 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 DUF3584 PF12128.3 1201 0.025 3.5 24.7 2 3 0.00069 0.03 3.2 13.9 350 531 184 275 155 316 0.49 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 DUF3584 PF12128.3 1201 0.025 3.5 24.7 3 3 0.00023 0.01 4.8 0.1 21 35 328 342 322 344 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 PduV-EutP PF10662.4 143 7e-08 23.8 0.7 1 3 2e-05 0.00089 10.5 0.1 2 24 32 54 31 70 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 PduV-EutP PF10662.4 143 7e-08 23.8 0.7 2 3 0.049 2.2 -0.5 0.0 47 73 140 168 120 202 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 PduV-EutP PF10662.4 143 7e-08 23.8 0.7 3 3 5.5e-05 0.0024 9.1 0.0 2 23 325 346 324 364 0.88 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_24 - 324 Epimerase PF01370.16 236 0.00013 13.1 0.1 1 1 4.1e-06 0.00018 12.7 0.1 1 39 152 191 152 247 0.82 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 2_7 - 548 Pyr_redox PF00070.22 80 5.6e-25 79.4 2.2 1 2 7.3e-05 0.0032 9.7 0.5 2 31 88 117 87 119 0.95 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 Pyr_redox PF00070.22 80 5.6e-25 79.4 2.2 2 2 2.9e-23 1.3e-21 68.7 0.1 1 72 252 323 252 334 0.93 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 TrwB_AAD_bind PF10412.4 386 1.2e-05 15.8 0.8 1 2 0.00015 0.0065 6.8 0.1 17 38 33 54 25 62 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TrwB_AAD_bind PF10412.4 386 1.2e-05 15.8 0.8 2 2 0.00015 0.0066 6.8 0.1 16 39 325 348 323 351 0.90 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_24 - 324 DapB_N PF01113.15 124 4.6e-06 18.3 0.2 1 2 0.042 1.9 0.2 0.0 92 103 121 132 115 142 0.84 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_24 - 324 DapB_N PF01113.15 124 4.6e-06 18.3 0.2 2 2 1.1e-06 4.8e-05 15.1 0.2 3 97 152 242 150 250 0.78 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_28 - 489 Herpes_TK PF00693.13 281 0.00019 12.4 1.8 1 2 0.0058 0.26 2.1 0.0 1 34 38 71 38 83 0.77 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Herpes_TK PF00693.13 281 0.00019 12.4 1.8 2 2 5.9e-05 0.0026 8.6 0.0 1 42 331 370 331 400 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ArgK PF03308.11 267 0.0079 6.7 6.9 1 3 0.014 0.63 0.4 0.1 31 55 33 57 27 66 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ArgK PF03308.11 267 0.0079 6.7 6.9 2 3 0.089 3.9 -2.2 0.8 181 217 215 251 197 284 0.45 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ArgK PF03308.11 267 0.0079 6.7 6.9 3 3 3.1e-05 0.0013 9.2 0.1 5 52 304 347 300 352 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Pox_A32 PF04665.7 241 6.4e-07 20.6 0.1 1 2 3.1e-05 0.0014 9.7 0.0 8 35 25 53 19 58 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Pox_A32 PF04665.7 241 6.4e-07 20.6 0.1 2 2 0.00014 0.006 7.6 0.0 15 37 326 348 317 350 0.91 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 GTP_EFTU PF00009.22 188 1.4e-05 16.4 1.5 1 2 0.00051 0.022 5.9 0.0 5 33 33 61 30 84 0.77 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 GTP_EFTU PF00009.22 188 1.4e-05 16.4 1.5 2 2 7.5e-05 0.0033 8.6 0.0 5 37 326 358 324 386 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 RNA_helicase PF00910.17 107 9.6e-07 20.8 2.0 1 3 0.0003 0.013 7.5 0.0 2 23 35 56 34 76 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 RNA_helicase PF00910.17 107 9.6e-07 20.8 2.0 2 3 0.058 2.5 0.1 0.6 18 98 161 241 158 247 0.63 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 RNA_helicase PF00910.17 107 9.6e-07 20.8 2.0 3 3 4.3e-05 0.0019 10.2 0.0 1 38 327 364 327 373 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 UPF0079 PF02367.12 123 9.6e-06 17.0 0.1 1 2 0.0011 0.047 5.1 0.1 18 40 34 56 21 64 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 UPF0079 PF02367.12 123 9.6e-06 17.0 0.1 2 2 5.4e-05 0.0024 9.3 0.0 6 41 315 351 310 375 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_24 PF13479.1 213 4.6e-05 14.8 1.1 1 2 0.00033 0.015 6.6 0.1 5 25 33 54 30 57 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_24 PF13479.1 213 4.6e-05 14.8 1.1 2 2 0.00053 0.023 6.0 0.1 5 21 326 342 324 348 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NACHT PF05729.7 166 2.2e-12 38.7 0.0 1 2 6.5e-07 2.9e-05 15.5 0.0 3 33 34 64 32 137 0.72 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NACHT PF05729.7 166 2.2e-12 38.7 0.0 2 2 1.4e-08 6e-07 21.0 0.0 3 71 327 392 325 435 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_25 PF13481.1 194 5e-06 17.8 0.0 1 2 0.00019 0.0083 7.2 0.0 11 54 7 52 1 63 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_25 PF13481.1 194 5e-06 17.8 0.0 2 2 0.00012 0.0053 7.9 0.0 30 52 321 343 310 353 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_tran_2 PF12848.2 85 6.4e-10 30.6 27.4 1 2 5.8e-09 2.6e-07 22.2 18.7 4 65 174 235 172 238 0.97 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_tran_2 PF12848.2 85 6.4e-10 30.6 27.4 2 2 4.3e-06 0.00019 13.1 1.5 54 84 255 284 242 285 0.75 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_28 PF13521.1 163 3.8e-13 41.4 0.6 1 3 3.2e-08 1.4e-06 20.1 0.0 1 28 33 66 33 86 0.79 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_28 PF13521.1 163 3.8e-13 41.4 0.6 2 3 0.08 3.5 -0.7 0.5 63 69 196 202 161 245 0.55 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_28 PF13521.1 163 3.8e-13 41.4 0.6 3 3 1.7e-07 7.5e-06 17.7 0.0 1 43 326 370 326 405 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_5 PF07728.9 139 3.7e-07 21.7 5.7 1 2 0.00013 0.0057 8.2 0.0 3 25 35 57 33 86 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_5 PF07728.9 139 3.7e-07 21.7 5.7 2 2 2.7e-06 0.00012 13.6 0.0 2 43 327 372 326 454 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3f9c350d-50d3-4828-a29f-42bdb6bb64eb # Target file: checkm_output/bins/pGCA_002633805.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002633805.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3f9c350d-50d3-4828-a29f-42bdb6bb64eb checkm_output/bins/pGCA_002633805.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:50:08 2020 # [ok]