#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
4_2                  -            415 Seryl_tRNA_N         PF02403.17   108    0.0072    7.6  19.4   1   2    0.0031     0.091    4.0   6.7    53   105   192   242   145   245 0.84 # 298 # 1542 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.324
4_2                  -            415 Seryl_tRNA_N         PF02403.17   108    0.0072    7.6  19.4   2   2   0.00011    0.0032    8.7   3.3     3    83   292   368   283   378 0.70 # 298 # 1542 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.324
4_2                  -            415 SecA_DEAD            PF07517.9    266     0.029    4.8  15.3   1   2    0.0029     0.085    3.2   1.8     5    59   183   241   179   262 0.76 # 298 # 1542 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.324
4_2                  -            415 SecA_DEAD            PF07517.9    266     0.029    4.8  15.3   2   2   0.00012    0.0036    7.7   2.9    10    82   280   395   269   401 0.78 # 298 # 1542 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.324
3_3                  -            179 PAPS_reduct          PF01507.14   174   0.00012   13.1   0.0   1   1   7.3e-06   0.00021   12.3   0.0    89   166     2    93     1    95 0.92 # 2287 # 2823 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.305
4_2                  -            415 Kinesin-relat_1      PF12711.2     86     0.016    6.8  17.6   1   3     0.052       1.5    0.5   1.2     4    41   187   228   185   243 0.67 # 298 # 1542 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.324
4_2                  -            415 Kinesin-relat_1      PF12711.2     86     0.016    6.8  17.6   2   3   1.5e-05   0.00044   11.9   5.0     2    65   280   345   279   360 0.85 # 298 # 1542 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.324
4_2                  -            415 Kinesin-relat_1      PF12711.2     86     0.016    6.8  17.6   3   3    0.0016     0.047    5.3   0.4    19    42   333   356   326   386 0.75 # 298 # 1542 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.324
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/55e264ed-1677-4644-9aff-aaee0ee56121
# Target file:     checkm_output/bins/pGCA_002290105.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002290105.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/55e264ed-1677-4644-9aff-aaee0ee56121 checkm_output/bins/pGCA_002290105.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:49:39 2020
# [ok]