# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_6 - 536 Mg_chelatase PF01078.16 207 2.5e-05 16.7 0.0 1 1 4e-07 5.1e-05 15.7 0.0 19 49 348 378 333 389 0.85 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 2_6 - 756 cobW PF02492.14 178 2.4e-05 17.1 0.1 1 2 0.0012 0.15 4.7 0.0 2 22 32 52 31 61 0.82 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 cobW PF02492.14 178 2.4e-05 17.1 0.1 2 2 2.8e-05 0.0036 10.0 0.0 2 21 480 499 479 508 0.83 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 ABC_ATPase PF09818.4 448 2.6e-05 16.1 0.0 1 1 3.5e-07 4.4e-05 15.4 0.0 204 269 433 503 417 507 0.67 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_31 - 232 IstB_IS21 PF01695.12 178 0.00071 12.3 0.1 1 1 1.7e-05 0.0022 10.7 0.0 38 63 17 43 7 50 0.83 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_37 - 284 MipZ PF09140.6 261 5.9e-12 38.4 0.2 1 2 2.9e-10 3.7e-08 26.0 0.1 2 55 20 73 19 94 0.87 # 31854 # 32705 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.320 1_37 - 284 MipZ PF09140.6 261 5.9e-12 38.4 0.2 2 2 1.6e-05 0.002 10.4 0.0 78 126 123 171 100 180 0.82 # 31854 # 32705 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.320 1_37 - 284 YhjQ PF06564.7 244 2.3e-09 30.2 0.0 1 1 2.6e-11 3.4e-09 29.6 0.0 10 152 27 178 19 183 0.80 # 31854 # 32705 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.320 1_52 - 144 SSB PF00436.20 104 1.8e-13 43.6 0.0 1 1 2e-15 2.6e-13 43.1 0.0 2 103 4 98 3 99 0.93 # 43282 # 43713 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 1_77 - 657 DUF87 PF01935.12 229 7.8e-06 19.1 0.2 1 1 1.9e-07 2.5e-05 17.4 0.2 27 75 272 316 266 490 0.83 # 63286 # 65256 # 1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 2_6 - 756 AAA_22 PF13401.1 131 1.7e-07 24.7 0.1 1 2 0.024 1.5 2.2 0.0 6 21 32 47 27 62 0.87 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_22 PF13401.1 131 1.7e-07 24.7 0.1 2 2 2.3e-07 1.4e-05 18.5 0.0 6 36 480 510 474 552 0.73 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_6 - 536 AAA_22 PF13401.1 131 0.00044 13.6 0.2 1 2 9e-05 0.0057 10.1 0.0 3 22 350 369 348 396 0.90 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 1_6 - 536 AAA_22 PF13401.1 131 0.00044 13.6 0.2 2 2 0.073 4.7 0.6 0.1 78 112 456 493 411 509 0.60 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 2_6 - 756 ATP_bind_1 PF03029.12 238 3.4e-05 16.7 0.0 1 2 0.016 2.1 1.0 0.0 2 16 36 50 35 60 0.79 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 ATP_bind_1 PF03029.12 238 3.4e-05 16.7 0.0 2 2 4.2e-06 0.00053 12.8 0.0 1 23 483 505 483 510 0.87 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_6 - 536 MutS_V PF00488.16 235 0.00022 13.9 0.2 1 1 3.8e-06 0.00048 12.8 0.2 27 59 335 367 308 376 0.71 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 1_6 - 536 DNA_pol3_delta2 PF13177.1 162 0.00027 13.9 6.7 1 2 0.017 2.2 1.2 0.1 85 126 84 129 74 148 0.78 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 1_6 - 536 DNA_pol3_delta2 PF13177.1 162 0.00027 13.9 6.7 2 2 6.8e-06 0.00086 12.2 2.5 8 144 340 507 334 521 0.72 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 2_6 - 756 AAA_15 PF13175.1 415 1.4e-09 30.7 0.6 1 3 1.1e-06 0.00014 14.2 0.0 359 415 343 402 272 402 0.80 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_15 PF13175.1 415 1.4e-09 30.7 0.6 2 3 0.022 2.8 0.0 0.1 24 43 480 500 458 618 0.67 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_15 PF13175.1 415 1.4e-09 30.7 0.6 3 3 4.3e-06 0.00054 12.3 0.1 336 406 627 700 586 709 0.77 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_17 PF13207.1 121 1.1e-06 22.7 0.1 1 2 0.011 1.4 3.1 0.1 5 15 36 46 34 48 0.86 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_17 PF13207.1 121 1.1e-06 22.7 0.1 2 2 7.1e-07 9e-05 16.6 0.0 3 46 482 524 481 612 0.73 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_21 PF13304.1 303 3.7e-17 56.4 6.7 1 4 0.039 1.7 1.7 0.0 2 15 33 46 32 73 0.90 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_21 PF13304.1 303 3.7e-17 56.4 6.7 2 4 1e-10 4.2e-09 29.9 0.2 237 303 338 403 268 403 0.81 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_21 PF13304.1 303 3.7e-17 56.4 6.7 3 4 0.00033 0.014 8.5 0.0 1 21 480 500 480 550 0.76 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_21 PF13304.1 303 3.7e-17 56.4 6.7 4 4 9.9e-07 4.2e-05 16.8 0.4 167 294 612 701 587 710 0.72 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_31 - 232 AAA_21 PF13304.1 303 1.5e-14 47.9 3.3 1 2 2.6e-07 1.1e-05 18.7 1.7 3 35 31 64 30 107 0.61 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_31 - 232 AAA_21 PF13304.1 303 1.5e-14 47.9 3.3 2 2 1.6e-10 6.6e-09 29.3 0.1 221 294 103 173 55 176 0.72 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_11 - 301 AAA_21 PF13304.1 303 5.6e-13 42.7 3.7 1 1 3.2e-13 1.4e-11 38.1 0.3 3 298 31 188 29 192 0.71 # 9523 # 10425 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.322 2_6 - 756 Miro PF08477.8 119 0.00018 15.3 0.0 1 2 0.0054 0.68 3.7 0.0 5 20 36 51 33 94 0.65 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 Miro PF08477.8 119 0.00018 15.3 0.0 2 2 0.00017 0.022 8.5 0.0 3 22 482 501 481 528 0.78 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 MobB PF03205.9 140 0.00035 13.6 0.0 1 2 0.0026 0.33 3.9 0.0 4 28 34 58 31 63 0.82 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 MobB PF03205.9 140 0.00035 13.6 0.0 2 2 0.00052 0.066 6.2 0.0 4 28 482 506 479 509 0.81 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_37 - 284 ArsA_ATPase PF02374.10 305 9.8e-10 31.1 0.4 1 1 2.4e-11 3e-09 29.5 0.4 7 136 25 153 19 158 0.67 # 31854 # 32705 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.320 2_6 - 756 T2SE PF00437.15 272 7.7e-07 21.5 0.0 1 2 0.0022 0.28 3.2 0.0 124 154 26 56 5 62 0.75 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 T2SE PF00437.15 272 7.7e-07 21.5 0.0 2 2 3.4e-07 4.3e-05 15.7 0.0 126 174 476 523 450 540 0.83 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 Zeta_toxin PF06414.7 201 1.1e-06 21.1 0.0 1 2 0.004 0.17 4.2 0.0 15 40 29 54 16 76 0.79 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 Zeta_toxin PF06414.7 201 1.1e-06 21.1 0.0 2 2 2.7e-06 0.00012 14.5 0.0 14 52 476 514 464 541 0.88 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_11 - 301 Zeta_toxin PF06414.7 201 0.00073 11.9 0.0 1 1 4e-05 0.0017 10.7 0.0 21 42 32 54 15 63 0.84 # 9523 # 10425 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.322 1_31 - 232 Zeta_toxin PF06414.7 201 0.001 11.4 0.0 1 1 4.1e-05 0.0017 10.6 0.0 18 45 29 57 14 67 0.79 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 2_6 - 756 SMC_N PF02463.14 220 3.3e-11 36.0 0.0 1 4 0.0039 0.12 4.7 0.1 19 41 26 47 10 58 0.75 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 SMC_N PF02463.14 220 3.3e-11 36.0 0.0 2 4 0.00054 0.017 7.5 0.0 136 212 337 412 269 418 0.82 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 SMC_N PF02463.14 220 3.3e-11 36.0 0.0 3 4 8.6e-06 0.00027 13.4 0.0 7 53 460 507 456 527 0.74 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 SMC_N PF02463.14 220 3.3e-11 36.0 0.0 4 4 0.0058 0.19 4.2 0.0 135 211 632 718 535 724 0.79 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_6 - 536 SMC_N PF02463.14 220 1.2e-08 27.6 3.5 1 2 8.8e-05 0.0028 10.1 0.1 24 40 351 367 332 376 0.80 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 1_6 - 536 SMC_N PF02463.14 220 1.2e-08 27.6 3.5 2 2 4.6e-07 1.5e-05 17.6 0.6 149 215 457 523 407 527 0.80 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 1_31 - 232 SMC_N PF02463.14 220 4.1e-06 19.4 2.9 1 2 0.00018 0.0058 9.1 1.3 10 44 11 47 3 50 0.67 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_31 - 232 SMC_N PF02463.14 220 4.1e-06 19.4 2.9 2 2 9.2e-05 0.0029 10.0 0.0 135 203 119 181 64 192 0.76 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_11 - 301 SMC_N PF02463.14 220 0.0004 12.9 2.8 1 2 0.00063 0.02 7.3 0.1 11 45 9 48 2 64 0.66 # 9523 # 10425 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.322 1_11 - 301 SMC_N PF02463.14 220 0.0004 12.9 2.8 2 2 0.0026 0.082 5.3 0.0 160 206 149 197 88 208 0.78 # 9523 # 10425 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.322 1_37 - 284 Fer4_NifH PF00142.13 273 1e-07 24.6 0.5 1 2 1.9e-09 2.4e-07 23.4 0.3 8 53 27 72 19 92 0.87 # 31854 # 32705 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.320 1_37 - 284 Fer4_NifH PF00142.13 273 1e-07 24.6 0.5 2 2 0.086 11 -1.7 0.0 193 222 221 252 153 278 0.54 # 31854 # 32705 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.320 2_6 - 756 Arch_ATPase PF01637.13 234 3.9e-05 16.6 0.0 1 2 0.081 5.2 -0.1 0.0 104 140 376 407 336 412 0.67 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 Arch_ATPase PF01637.13 234 3.9e-05 16.6 0.0 2 2 2.3e-05 0.0014 11.5 0.0 21 49 479 507 466 541 0.84 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_39 - 418 Arch_ATPase PF01637.13 234 0.00016 14.7 0.2 1 1 6.8e-06 0.00043 13.2 0.0 21 57 77 113 74 209 0.89 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_6 - 756 AAA_16 PF13191.1 185 1.1e-09 31.8 0.0 1 2 0.00049 0.031 7.5 0.0 26 51 32 57 18 76 0.80 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_16 PF13191.1 185 1.1e-09 31.8 0.0 2 2 2.8e-08 1.8e-06 21.3 0.0 23 81 477 539 466 550 0.75 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_39 - 418 AAA_16 PF13191.1 185 0.00039 13.7 0.0 1 1 1.7e-05 0.0011 12.2 0.0 24 157 76 210 70 215 0.67 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_6 - 756 AAA_23 PF13476.1 202 5.4e-09 29.9 0.2 1 2 0.00026 0.0083 9.7 0.1 10 35 20 46 12 48 0.90 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_23 PF13476.1 202 5.4e-09 29.9 0.2 2 2 8.7e-07 2.7e-05 17.8 0.0 21 41 480 500 458 642 0.78 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_6 - 536 AAA_23 PF13476.1 202 8.5e-05 16.2 3.2 1 1 2.7e-06 8.5e-05 16.2 3.2 11 134 342 487 328 529 0.52 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 1_31 - 232 AAA_23 PF13476.1 202 0.00022 14.8 6.2 1 1 1.5e-05 0.00047 13.7 6.2 5 53 12 61 2 229 0.71 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_11 - 301 AAA_23 PF13476.1 202 0.0057 10.2 12.6 1 1 0.00099 0.031 7.8 12.6 5 144 12 212 9 299 0.46 # 9523 # 10425 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.322 2_6 - 756 AAA_18 PF13238.1 129 8.5e-05 16.1 0.0 1 2 0.017 2.2 1.9 0.0 3 14 35 46 34 64 0.91 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_18 PF13238.1 129 8.5e-05 16.1 0.0 2 2 3.1e-05 0.0039 10.8 0.0 2 21 482 501 482 536 0.80 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_37 - 284 CbiA PF01656.18 195 3.5e-28 91.6 0.2 1 1 3.4e-30 4.4e-28 91.2 0.2 1 190 21 242 21 247 0.78 # 31854 # 32705 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.320 1_72 - 212 Ribosomal_S13 PF00416.17 107 0.00081 13.1 0.4 1 1 2.4e-05 0.0016 12.2 0.4 7 81 100 176 95 208 0.80 # 60578 # 61213 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.374 1_80 - 277 Ribosomal_S13 PF00416.17 107 0.0044 10.7 7.2 1 1 3.5e-05 0.0022 11.7 3.8 37 86 174 223 167 231 0.86 # 67124 # 67954 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.306 1_39 - 418 KaiC PF06745.8 227 5.3e-09 28.7 2.9 1 1 2.2e-10 1.4e-08 27.3 0.6 1 78 57 132 57 227 0.76 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_6 - 756 KaiC PF06745.8 227 6e-05 15.5 0.1 1 2 0.035 2.2 0.5 0.0 16 35 27 46 21 53 0.90 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 KaiC PF06745.8 227 6e-05 15.5 0.1 2 2 1.1e-05 0.00072 11.9 0.0 14 40 473 499 463 508 0.87 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_14 PF13173.1 128 9e-07 22.1 0.1 1 2 0.014 1.8 1.7 0.0 2 24 30 52 29 79 0.84 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_14 PF13173.1 128 9e-07 22.1 0.1 2 2 1.1e-06 0.00013 15.1 0.0 4 42 480 515 477 545 0.67 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_29 PF13555.1 62 1.9e-12 39.8 0.2 1 2 2.1e-06 6.7e-05 15.7 0.0 15 40 23 47 12 62 0.78 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_29 PF13555.1 62 1.9e-12 39.8 0.2 2 2 3.7e-08 1.2e-06 21.3 0.0 17 43 473 498 460 501 0.81 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_31 - 232 AAA_29 PF13555.1 62 1.4e-06 21.0 0.1 1 1 9.5e-08 3e-06 20.0 0.1 13 40 18 44 13 48 0.84 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_6 - 536 AAA_29 PF13555.1 62 4.2e-06 19.5 0.1 1 1 3.1e-07 9.8e-06 18.3 0.1 16 57 345 385 340 389 0.83 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 1_11 - 301 AAA_29 PF13555.1 62 1.1e-05 18.2 0.1 1 1 7.6e-07 2.4e-05 17.1 0.1 14 56 19 61 12 64 0.81 # 9523 # 10425 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.322 1_31 - 232 AAA PF00004.24 132 0.00031 14.2 0.1 1 1 2.8e-05 0.0012 12.3 0.1 2 31 31 60 30 187 0.70 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_39 - 418 AAA PF00004.24 132 0.00034 14.1 0.0 1 1 2e-05 0.00084 12.8 0.0 3 107 81 208 79 216 0.63 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_6 - 756 AAA PF00004.24 132 0.00043 13.8 0.0 1 2 0.055 2.3 1.7 0.0 38 74 367 405 339 420 0.73 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA PF00004.24 132 0.00043 13.8 0.0 2 2 0.00068 0.029 7.8 0.0 3 30 483 511 481 543 0.80 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_39 - 418 CobU PF02283.11 167 6.4e-06 18.9 0.0 1 1 1.1e-07 1.4e-05 17.8 0.0 4 122 82 210 79 220 0.80 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_6 - 756 MMR_HSR1 PF01926.18 116 0.00089 12.5 0.1 1 2 0.0028 0.36 4.1 0.0 3 20 34 51 32 90 0.74 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 MMR_HSR1 PF01926.18 116 0.00089 12.5 0.1 2 2 0.0018 0.23 4.7 0.0 3 21 482 500 480 522 0.83 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 DUF258 PF03193.11 161 3.5e-10 32.5 0.2 1 2 1.5e-06 9.8e-05 14.8 0.0 22 52 16 47 6 70 0.80 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 DUF258 PF03193.11 161 3.5e-10 32.5 0.2 2 2 1.2e-06 7.5e-05 15.2 0.1 19 59 461 502 453 522 0.81 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_31 - 232 DUF258 PF03193.11 161 9.8e-07 21.3 0.2 1 1 2.6e-08 1.6e-06 20.6 0.2 20 69 11 61 2 65 0.84 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_84 - 794 TraG-D_C PF12696.2 128 2.2e-28 92.0 0.4 1 1 3e-30 3.8e-28 91.2 0.4 1 126 581 698 581 700 0.87 # 70356 # 72737 # 1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.384 1_37 - 284 AAA_31 PF13614.1 157 2.1e-09 30.7 0.2 1 1 5.4e-11 6.9e-09 29.1 0.2 8 137 26 163 19 181 0.77 # 31854 # 32705 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.320 2_6 - 756 NTPase_1 PF03266.10 168 0.00075 12.5 0.0 1 1 2.6e-05 0.0033 10.4 0.0 3 27 482 506 480 508 0.88 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_33 PF13671.1 143 4.3e-07 23.1 0.1 1 2 0.00074 0.047 6.8 0.0 3 16 34 47 33 58 0.86 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_33 PF13671.1 143 4.3e-07 23.1 0.1 2 2 5.5e-06 0.00035 13.7 0.0 2 39 481 521 480 552 0.70 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_39 - 418 AAA_33 PF13671.1 143 0.00075 12.6 0.0 1 1 2.6e-05 0.0017 11.5 0.0 2 23 79 100 78 150 0.81 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_39 - 418 KTI12 PF08433.5 270 0.001 11.5 0.0 1 1 1.8e-05 0.0023 10.4 0.0 6 39 81 114 77 121 0.89 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_8 - 148 2-Hacid_dh_C PF02826.14 178 5.7e-40 129.6 0.0 1 1 5.3e-42 6.7e-40 129.3 0.0 60 178 1 116 1 116 0.96 # 7696 # 8139 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.363 2_6 - 756 AAA_30 PF13604.1 196 1.5e-05 17.9 0.0 1 2 0.034 4.3 0.1 0.0 19 35 31 47 20 61 0.79 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_30 PF13604.1 196 1.5e-05 17.9 0.0 2 2 1.1e-06 0.00014 14.7 0.0 19 46 479 506 471 510 0.88 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 FtsK_SpoIIIE PF01580.13 205 0.00012 14.9 0.2 1 2 0.00082 0.1 5.2 0.0 25 54 17 46 6 54 0.82 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 FtsK_SpoIIIE PF01580.13 205 0.00012 14.9 0.2 2 2 0.00018 0.023 7.4 0.0 39 58 472 498 449 505 0.74 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_2 - 58 CoA_binding_3 PF13727.1 175 0.0078 9.3 4.5 1 1 6.8e-05 0.0087 9.1 4.5 20 61 7 50 3 54 0.83 # 1334 # 1507 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 1_39 - 418 RecA PF00154.16 323 7.6e-152 498.1 0.9 1 1 7.2e-154 9.1e-152 497.9 0.9 1 320 25 346 25 349 0.98 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_11 - 301 ABC_tran PF00005.22 137 4.8e-31 101.1 0.1 1 1 5.8e-32 1.5e-30 99.6 0.0 5 136 21 157 17 158 0.95 # 9523 # 10425 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.322 1_31 - 232 ABC_tran PF00005.22 137 2.8e-30 98.7 0.1 1 1 1.6e-31 4e-30 98.1 0.1 1 136 17 148 17 149 0.97 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 2_6 - 756 ABC_tran PF00005.22 137 4.6e-28 91.5 0.0 1 3 1.9e-06 4.9e-05 16.9 0.0 1 28 20 47 20 58 0.92 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 ABC_tran PF00005.22 137 4.6e-28 91.5 0.0 2 3 1.4e-06 3.5e-05 17.4 0.0 84 136 313 367 252 368 0.71 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 ABC_tran PF00005.22 137 4.6e-28 91.5 0.0 3 3 1.8e-17 4.5e-16 52.7 0.0 1 136 468 674 468 675 0.85 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_6 - 536 ABC_tran PF00005.22 137 8.5e-20 64.7 0.0 1 1 6.9e-21 1.8e-19 63.7 0.0 1 134 341 472 341 475 0.84 # 2992 # 4599 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.282 1_39 - 418 ABC_tran PF00005.22 137 0.00033 14.2 0.2 1 1 6.7e-05 0.0017 11.9 0.0 8 48 73 113 71 274 0.80 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_6 - 756 TIGR03263 TIGR03263 180 1.4e-05 17.8 0.1 1 2 0.0065 0.83 2.2 0.0 3 23 32 52 30 67 0.80 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 TIGR03263 TIGR03263 180 1.4e-05 17.8 0.1 2 2 2.7e-06 0.00034 13.2 0.0 2 25 479 502 478 514 0.83 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_31 - 232 RuvB_N PF05496.7 234 0.00067 11.9 0.0 1 1 1.2e-05 0.0015 10.8 0.0 48 78 25 55 12 71 0.88 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 2_6 - 756 AAA_19 PF13245.1 76 0.00025 14.1 0.0 1 2 0.036 4.6 0.4 0.0 10 34 30 54 24 64 0.79 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_19 PF13245.1 76 0.00025 14.1 0.0 2 2 2.5e-05 0.0032 10.5 0.0 12 29 480 496 471 506 0.80 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_77 - 657 AAA_10 PF12846.2 304 1.5e-60 198.3 0.4 1 1 7.4e-62 2.3e-60 197.7 0.4 1 300 268 609 268 610 0.89 # 63286 # 65256 # 1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_84 - 794 AAA_10 PF12846.2 304 8.5e-07 21.9 0.0 1 2 4.4e-06 0.00014 14.6 0.0 3 173 200 425 198 443 0.52 # 70356 # 72737 # 1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.384 1_84 - 794 AAA_10 PF12846.2 304 8.5e-07 21.9 0.0 2 2 0.0034 0.11 5.1 0.0 214 289 572 648 540 661 0.77 # 70356 # 72737 # 1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.384 2_6 - 756 AAA_10 PF12846.2 304 1.5e-05 17.8 0.1 1 2 0.0057 0.18 4.4 0.1 4 18 33 47 30 58 0.87 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_10 PF12846.2 304 1.5e-05 17.8 0.1 2 2 0.00024 0.0075 8.9 0.0 4 25 481 502 479 514 0.83 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_31 - 232 AAA_10 PF12846.2 304 0.0003 13.5 0.1 1 2 5.4e-05 0.0017 11.0 0.0 1 22 27 48 27 67 0.90 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_31 - 232 AAA_10 PF12846.2 304 0.0003 13.5 0.1 2 2 0.093 3 0.4 0.0 219 272 137 186 117 221 0.70 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 1_31 - 232 SbcCD_C PF13558.1 90 5.5e-05 16.3 0.1 1 1 1.8e-05 0.00075 12.7 0.1 27 89 115 164 96 165 0.66 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 2_6 - 756 SbcCD_C PF13558.1 90 0.00022 14.4 0.4 1 2 0.027 1.2 2.5 0.0 28 41 333 346 328 371 0.76 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 SbcCD_C PF13558.1 90 0.00022 14.4 0.4 2 2 0.0016 0.067 6.4 0.1 28 89 642 690 636 691 0.68 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_11 - 301 SbcCD_C PF13558.1 90 0.0011 12.2 0.0 1 1 5.4e-05 0.0023 11.1 0.0 63 81 147 165 127 170 0.86 # 9523 # 10425 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.322 1_77 - 657 Zot PF05707.7 193 8.8e-05 15.3 0.1 1 2 0.087 11 -1.4 0.0 5 20 273 287 272 354 0.77 # 63286 # 65256 # 1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_77 - 657 Zot PF05707.7 193 8.8e-05 15.3 0.1 2 2 2.5e-06 0.00032 13.4 0.0 79 129 520 568 447 582 0.80 # 63286 # 65256 # 1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 2_6 - 756 Viral_helicase1 PF01443.13 234 5.5e-06 19.3 0.0 1 2 0.00059 0.074 5.7 0.0 2 56 34 88 33 95 0.84 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 Viral_helicase1 PF01443.13 234 5.5e-06 19.3 0.0 2 2 2.3e-05 0.003 10.3 0.0 1 21 481 501 481 531 0.82 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_31 - 232 DUF815 PF05673.8 250 0.0002 13.6 0.0 1 1 4.7e-06 0.0003 13.0 0.0 52 79 26 53 10 63 0.86 # 28339 # 29034 # 1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.283 2_6 - 756 DUF815 PF05673.8 250 0.00035 12.7 0.0 1 2 0.0032 0.2 3.7 0.0 57 82 34 59 18 61 0.85 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 DUF815 PF05673.8 250 0.00035 12.7 0.0 2 2 0.00044 0.028 6.5 0.0 57 81 482 506 466 518 0.87 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_77 - 657 DUF853 PF05872.7 504 5.3e-08 24.8 0.0 1 2 2.4e-06 0.00031 12.4 0.0 22 66 269 313 259 319 0.88 # 63286 # 65256 # 1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_77 - 657 DUF853 PF05872.7 504 5.3e-08 24.8 0.0 2 2 1.3e-05 0.0016 10.0 0.0 256 309 520 573 488 632 0.86 # 63286 # 65256 # 1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_84 - 794 TrwB_AAD_bind PF10412.4 386 8.6e-18 57.3 0.2 1 3 0.014 0.91 1.2 0.0 18 58 201 244 195 256 0.68 # 70356 # 72737 # 1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.384 1_84 - 794 TrwB_AAD_bind PF10412.4 386 8.6e-18 57.3 0.2 2 3 0.04 2.6 -0.3 0.0 97 139 299 340 286 358 0.72 # 70356 # 72737 # 1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.384 1_84 - 794 TrwB_AAD_bind PF10412.4 386 8.6e-18 57.3 0.2 3 3 7.5e-18 4.8e-16 51.5 0.0 213 365 549 698 508 712 0.81 # 70356 # 72737 # 1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.384 1_77 - 657 TrwB_AAD_bind PF10412.4 386 1.1e-05 17.4 0.6 1 2 1.1e-06 7.3e-05 14.7 0.2 19 71 272 332 261 337 0.81 # 63286 # 65256 # 1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_77 - 657 TrwB_AAD_bind PF10412.4 386 1.1e-05 17.4 0.6 2 2 0.037 2.4 -0.1 0.0 226 285 500 568 481 618 0.61 # 63286 # 65256 # 1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_33 - 202 Sigma54_activ_2 PF14532.1 138 0.0005 13.4 0.0 1 1 7.2e-06 0.00092 12.5 0.0 56 122 36 107 19 119 0.76 # 30062 # 30667 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.366 1_84 - 794 T4SS-DNA_transf PF02534.9 469 9.4e-36 116.5 0.3 1 2 2e-22 2.5e-20 65.6 0.0 32 260 187 434 172 456 0.79 # 70356 # 72737 # 1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.384 1_84 - 794 T4SS-DNA_transf PF02534.9 469 9.4e-36 116.5 0.3 2 2 2.4e-17 3e-15 48.9 0.1 247 431 519 705 506 729 0.85 # 70356 # 72737 # 1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.384 2_6 - 756 RNA_helicase PF00910.17 107 3.2e-06 20.6 0.0 1 2 0.00092 0.059 6.9 0.0 2 59 34 86 33 95 0.76 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 RNA_helicase PF00910.17 107 3.2e-06 20.6 0.0 2 2 5.5e-05 0.0035 10.8 0.0 2 25 482 505 481 527 0.83 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_39 - 418 RNA_helicase PF00910.17 107 0.00076 12.9 0.0 1 1 2.8e-05 0.0018 11.7 0.0 3 65 81 138 79 159 0.69 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_6 - 756 UPF0079 PF02367.12 123 0.00011 15.1 0.0 1 2 0.044 5.6 -0.1 0.0 15 51 30 67 21 83 0.78 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 UPF0079 PF02367.12 123 0.00011 15.1 0.0 2 2 7.4e-06 0.00094 12.1 0.0 8 45 471 508 465 511 0.87 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 NACHT PF05729.7 166 4.8e-06 19.6 0.0 1 2 0.0071 0.91 2.4 0.0 2 30 32 60 31 68 0.77 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 NACHT PF05729.7 166 4.8e-06 19.6 0.0 2 2 1.6e-06 0.0002 14.3 0.0 3 28 481 506 480 518 0.87 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_25 PF13481.1 194 1.1e-10 34.5 0.0 1 2 1e-06 4.3e-05 16.2 0.0 30 59 27 59 19 84 0.84 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_25 PF13481.1 194 1.1e-10 34.5 0.0 2 2 2.7e-06 0.00012 14.8 0.0 27 53 472 498 449 523 0.87 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_39 - 418 AAA_25 PF13481.1 194 2.6e-08 26.7 0.3 1 1 1.7e-09 7.1e-08 25.3 0.3 10 186 52 209 45 215 0.75 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 1_77 - 657 AAA_25 PF13481.1 194 0.00074 12.2 0.0 1 1 3.4e-05 0.0014 11.2 0.0 36 124 271 375 265 392 0.74 # 63286 # 65256 # 1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 2_6 - 756 AAA_28 PF13521.1 163 0.00019 14.7 0.0 1 2 0.015 1.8 1.7 0.0 3 38 34 74 32 95 0.68 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_28 PF13521.1 163 0.00019 14.7 0.0 2 2 3.4e-05 0.0044 10.2 0.0 3 22 482 501 480 512 0.88 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 Herpes_Helicase PF02689.9 819 0.001 10.0 0.0 1 1 1.4e-05 0.0018 9.3 0.0 57 84 474 502 439 504 0.71 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 RNA12 PF10443.4 431 0.00019 13.2 0.0 1 2 0.006 0.76 1.3 0.0 19 37 32 50 16 60 0.75 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 RNA12 PF10443.4 431 0.00019 13.2 0.0 2 2 2.1e-05 0.0027 9.4 0.0 19 42 480 501 465 514 0.75 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_39 - 418 Rad51 PF08423.6 256 3.1e-11 35.8 0.1 1 1 2.1e-12 2.7e-10 32.8 0.1 14 223 51 245 38 250 0.80 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 2_6 - 756 AAA_5 PF07728.9 139 0.00076 12.5 0.0 1 3 0.021 2.7 1.0 0.0 5 26 36 58 33 69 0.76 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_5 PF07728.9 139 0.00076 12.5 0.0 2 3 0.00046 0.058 6.4 0.0 4 22 483 501 481 510 0.84 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 AAA_5 PF07728.9 139 0.00076 12.5 0.0 3 3 0.036 4.6 0.2 0.0 63 114 659 726 636 747 0.65 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 APS_kinase PF01583.15 157 5.7e-05 16.1 0.1 1 2 0.0025 0.16 4.9 0.0 4 20 32 48 29 62 0.77 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 2_6 - 756 APS_kinase PF01583.15 157 5.7e-05 16.1 0.1 2 2 0.00019 0.012 8.5 0.0 2 31 478 507 477 530 0.81 # 4214 # 6481 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.393 1_39 - 418 APS_kinase PF01583.15 157 0.00074 12.4 0.0 1 1 2e-05 0.0013 11.6 0.0 2 40 76 114 75 157 0.89 # 34491 # 35744 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.463 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/b5ed8a9a-286b-4c27-887d-ae2672ee42df # Target file: checkm_output/bins/pGCA_002224565.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002224565.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/b5ed8a9a-286b-4c27-887d-ae2672ee42df checkm_output/bins/pGCA_002224565.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:49:28 2020 # [ok]