# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 328 Mg_chelatase PF01078.16 207 0.0019 11.8 0.0 1 1 1.2e-05 0.0036 10.9 0.0 15 54 228 267 214 278 0.79 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_176 - 272 Eno-Rase_NADH_b PF12242.3 78 0.0019 12.5 0.0 1 1 1.5e-05 0.0044 11.3 0.0 41 57 3 19 1 37 0.77 # 185099 # 185914 # 1 # ID=1_176;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355 1_95 - 364 Methyltransf_32 PF13679.1 141 0.0029 11.8 0.0 1 1 2.1e-05 0.0065 10.6 0.0 21 80 28 88 18 98 0.77 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_95 - 364 UPF0020 PF01170.13 180 4.5e-06 20.8 0.0 1 1 4.7e-08 1.4e-05 19.2 0.0 32 156 36 150 22 168 0.75 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_201 - 257 cobW PF02492.14 178 0.00032 14.6 0.1 1 1 2.2e-06 0.00068 13.6 0.1 3 20 35 52 33 64 0.86 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_79 - 341 NAD_binding_3 PF03447.11 117 6.4e-05 17.8 0.1 1 1 4.4e-07 0.00013 16.8 0.1 1 86 10 92 10 115 0.91 # 81622 # 82644 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_47 - 312 Saccharop_dh PF03435.13 386 0.00024 14.6 0.0 1 2 6.5e-06 0.002 11.6 0.0 84 123 153 196 146 201 0.94 # 44182 # 45117 # -1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_47 - 312 Saccharop_dh PF03435.13 386 0.00024 14.6 0.0 2 2 0.016 4.8 0.5 0.0 328 353 251 276 240 287 0.86 # 44182 # 45117 # -1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_176 - 272 DUF1776 PF08643.5 299 2.2e-08 28.0 0.1 1 1 2.9e-10 8.8e-08 26.0 0.1 102 204 81 181 9 207 0.92 # 185099 # 185914 # 1 # ID=1_176;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355 1_3 - 328 IstB_IS21 PF01695.12 178 0.0019 12.1 0.0 1 1 1.2e-05 0.0038 11.1 0.0 44 64 232 252 200 267 0.77 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_4 - 274 MipZ PF09140.6 261 0.00098 12.7 0.1 1 1 1.2e-05 0.0037 10.8 0.1 11 112 16 114 6 165 0.66 # 2193 # 3014 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.366 1_54 - 443 3HCDH_N PF02737.13 180 0.00016 15.8 0.0 1 1 4.9e-06 0.0005 14.2 0.0 2 88 24 105 23 125 0.83 # 54633 # 55961 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.296 1_291 - 107 3HCDH_N PF02737.13 180 0.00062 13.9 0.1 1 1 7.4e-06 0.00075 13.7 0.1 84 159 10 82 8 98 0.83 # 302016 # 302336 # -1 # ID=1_291;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.318 1_56 - 308 3HCDH_N PF02737.13 180 0.0026 11.9 0.0 1 1 4e-05 0.0041 11.3 0.0 1 34 2 36 2 58 0.85 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_127 - 572 UvrD_C_2 PF13538.1 104 5.7e-10 33.8 0.0 1 1 4e-12 1.2e-09 32.7 0.0 55 103 484 543 421 544 0.78 # 133901 # 135616 # 1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.274 1_79 - 341 Gp_dh_N PF00044.19 151 0.00024 15.6 0.1 1 1 2.3e-06 0.00069 14.1 0.1 2 35 5 38 4 59 0.88 # 81622 # 82644 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_3 - 328 AAA_2 PF07724.9 171 3.9e-05 18.1 0.5 1 2 0.045 14 0.0 0.0 4 44 184 224 183 232 0.79 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_3 - 328 AAA_2 PF07724.9 171 3.9e-05 18.1 0.5 2 2 1.1e-06 0.00032 15.1 0.0 2 43 234 274 233 284 0.91 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_255 - 700 DUF87 PF01935.12 229 2.7e-08 28.3 2.2 1 2 0.095 14 -0.2 0.1 159 197 108 151 8 179 0.64 # 273825 # 275924 # -1 # ID=1_255;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.367 1_255 - 700 DUF87 PF01935.12 229 2.7e-08 28.3 2.2 2 2 1.3e-09 2e-07 25.5 0.0 26 109 282 400 280 543 0.55 # 273825 # 275924 # -1 # ID=1_255;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.367 1_3 - 328 DUF87 PF01935.12 229 0.00055 14.2 0.6 1 1 1.4e-05 0.0021 12.4 0.1 25 56 237 267 231 271 0.81 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_201 - 257 NB-ARC PF00931.17 287 0.00036 13.9 0.1 1 1 3.2e-06 0.00098 12.5 0.0 18 40 31 53 17 62 0.79 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_176 - 272 NmrA PF05368.8 233 3.8e-06 20.7 0.0 1 1 4.8e-08 7.3e-06 19.8 0.0 1 62 4 64 4 72 0.91 # 185099 # 185914 # 1 # ID=1_176;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355 1_56 - 308 NmrA PF05368.8 233 1.2e-05 19.1 1.3 1 1 4.9e-07 7.5e-05 16.5 1.3 1 195 3 214 3 253 0.62 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_3 - 328 AAA_22 PF13401.1 131 4.8e-05 18.0 0.1 1 1 1.3e-06 0.0002 16.0 0.0 6 67 237 315 229 325 0.75 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_201 - 257 AAA_22 PF13401.1 131 0.00033 15.3 0.2 1 1 1e-05 0.0016 13.1 0.0 5 24 33 52 29 87 0.85 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_126 - 689 SRP54 PF00448.17 196 0.00024 15.0 0.3 1 1 3e-06 0.00092 13.1 0.0 5 64 28 86 25 100 0.78 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_126 - 689 AAA_15 PF13175.1 415 6.7e-43 141.7 30.5 1 1 4.4e-45 6.7e-43 141.7 30.5 1 414 3 382 3 383 0.83 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_201 - 257 AAA_15 PF13175.1 415 0.00033 14.2 0.5 1 2 0.00093 0.14 5.5 0.7 15 43 25 59 9 154 0.66 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_201 - 257 AAA_15 PF13175.1 415 0.00033 14.2 0.5 2 2 0.00045 0.069 6.6 0.0 372 412 163 203 148 205 0.91 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_3 - 328 AAA_17 PF13207.1 121 9.5e-06 20.9 0.0 1 1 9.2e-07 7e-05 18.1 0.0 2 26 238 260 237 325 0.58 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_201 - 257 AAA_17 PF13207.1 121 4.9e-05 18.6 0.1 1 1 1.2e-06 8.9e-05 17.8 0.1 2 21 35 54 34 216 0.83 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_126 - 689 AAA_17 PF13207.1 121 0.089 8.1 7.3 1 1 0.00025 0.019 10.3 1.1 3 90 28 137 28 234 0.66 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_255 - 700 AAA_17 PF13207.1 121 0.094 8.0 5.9 1 1 0.00029 0.022 10.1 0.8 2 22 282 303 281 417 0.68 # 273825 # 275924 # -1 # ID=1_255;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.367 1_126 - 689 AAA_21 PF13304.1 303 4.7e-28 93.4 13.7 1 1 3.1e-30 4.7e-28 93.4 13.7 2 301 27 382 26 384 0.80 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_201 - 257 AAA_21 PF13304.1 303 4e-09 31.3 0.0 1 1 5.6e-09 8.6e-07 23.6 0.0 2 300 35 204 34 206 0.62 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_4 - 274 MobB PF03205.9 140 0.00045 14.4 0.0 1 1 9.2e-06 0.00093 13.4 0.0 8 38 14 44 7 105 0.88 # 2193 # 3014 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.366 1_201 - 257 MobB PF03205.9 140 0.0011 13.2 0.2 1 1 2.3e-05 0.0023 12.1 0.1 3 20 35 52 33 58 0.89 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_3 - 328 MobB PF03205.9 140 0.0011 13.2 0.2 1 1 7.9e-05 0.008 10.4 0.0 3 32 238 267 236 272 0.89 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_90 - 330 AAA_4 PF04326.9 122 9.5e-15 49.3 0.0 1 1 5.5e-17 1.7e-14 48.5 0.0 1 121 29 163 29 164 0.82 # 98285 # 99274 # -1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 1_79 - 341 Semialdhyde_dh PF01118.19 121 0.00018 16.3 0.1 1 1 2.2e-06 0.00066 14.5 0.0 2 93 6 92 5 94 0.87 # 81622 # 82644 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_99 - 563 Helicase_C PF00271.26 78 6.5e-05 17.3 0.0 1 1 4.5e-07 0.00014 16.2 0.0 16 78 285 347 270 347 0.86 # 108466 # 110154 # 1 # ID=1_99;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.381 1_4 - 274 ArsA_ATPase PF02374.10 305 0.0001 15.9 0.2 1 1 5.8e-07 0.00018 15.1 0.2 12 38 17 43 8 199 0.74 # 2193 # 3014 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.366 1_3 - 328 MCM PF00493.18 331 0.00013 15.3 0.0 1 1 8.6e-07 0.00026 14.3 0.0 53 85 231 263 217 269 0.88 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_3 - 328 T2SE PF00437.15 272 1.9e-29 96.8 0.2 1 1 2.1e-31 3.3e-29 96.1 0.0 4 210 110 325 107 327 0.89 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_201 - 257 T2SE PF00437.15 272 0.00042 13.7 1.2 1 1 3.8e-06 0.00057 13.3 0.2 110 150 14 54 2 65 0.76 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_10 - 500 AAA_26 PF13500.1 199 0.00085 13.4 0.0 1 1 1.8e-05 0.0028 11.7 0.0 1 35 226 260 226 343 0.86 # 9978 # 11477 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.344 1_4 - 274 AAA_26 PF13500.1 199 0.0022 12.1 0.1 1 1 2.4e-05 0.0037 11.3 0.1 7 194 12 226 6 231 0.63 # 2193 # 3014 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.366 1_3 - 328 Zeta_toxin PF06414.7 201 4.4e-05 17.1 0.1 1 2 0.0005 0.15 5.6 0.1 64 133 27 95 8 97 0.82 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_3 - 328 Zeta_toxin PF06414.7 201 4.4e-05 17.1 0.1 2 2 3.8e-05 0.012 9.2 0.0 14 42 233 262 221 282 0.81 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_79 - 341 F420_oxidored PF03807.12 96 1.5e-05 19.9 0.1 1 1 4.3e-07 6.6e-05 17.8 0.0 1 87 5 90 5 95 0.86 # 81622 # 82644 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_56 - 308 F420_oxidored PF03807.12 96 0.00072 14.5 0.2 1 1 9.5e-06 0.0014 13.5 0.2 1 31 2 30 2 83 0.91 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_126 - 689 SMC_N PF02463.14 220 1.2e-13 45.2 4.9 1 1 1.9e-14 2.9e-12 40.7 4.9 1 216 2 399 2 403 0.85 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_201 - 257 SMC_N PF02463.14 220 2e-05 18.4 1.5 1 1 4e-07 6.1e-05 16.8 1.5 24 211 32 215 17 220 0.76 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_4 - 274 Fer4_NifH PF00142.13 273 0.0011 12.6 0.0 1 1 5.2e-06 0.0016 12.1 0.0 2 64 7 71 6 85 0.76 # 2193 # 3014 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.366 1_201 - 257 Arch_ATPase PF01637.13 234 0.00048 14.3 0.3 1 2 7e-06 0.0021 12.2 0.0 7 40 21 52 19 66 0.83 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_201 - 257 Arch_ATPase PF01637.13 234 0.00048 14.3 0.3 2 2 0.072 22 -0.9 0.1 96 119 171 194 114 226 0.65 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_201 - 257 AAA_16 PF13191.1 185 4.8e-06 21.1 0.2 1 1 1.4e-07 2.2e-05 19.0 0.2 23 81 31 92 20 202 0.74 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_3 - 328 AAA_16 PF13191.1 185 0.0012 13.3 0.0 1 1 1.7e-05 0.0026 12.2 0.0 19 52 230 269 217 325 0.68 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_126 - 689 AAA_23 PF13476.1 202 1.1e-14 49.8 15.7 1 1 6.9e-17 1.1e-14 49.8 15.7 1 195 5 247 5 299 0.53 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_201 - 257 AAA_23 PF13476.1 202 9.7e-05 17.2 2.0 1 1 5e-06 0.00077 14.3 2.0 12 38 24 51 17 198 0.91 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_3 - 328 AAA_18 PF13238.1 129 1.1e-05 20.2 0.1 1 1 5e-07 7.6e-05 17.5 0.0 1 35 238 276 238 316 0.73 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_201 - 257 AAA_18 PF13238.1 129 0.0023 12.7 1.2 1 1 3.6e-05 0.0055 11.5 0.4 1 16 35 50 35 67 0.86 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_176 - 272 adh_short PF00106.20 167 1e-33 111.1 0.0 1 1 8.2e-36 1.3e-33 110.8 0.0 2 166 3 163 2 164 0.93 # 185099 # 185914 # 1 # ID=1_176;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355 1_56 - 308 adh_short PF00106.20 167 2.1e-07 25.5 0.1 1 2 5.6e-05 0.0085 10.5 0.0 5 31 5 31 3 39 0.90 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_56 - 308 adh_short PF00106.20 167 2.1e-07 25.5 0.1 2 2 1.1e-05 0.0017 12.8 0.0 72 141 50 114 48 119 0.80 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_79 - 341 GFO_IDH_MocA PF01408.17 120 7.2e-32 104.9 0.2 1 1 5.6e-34 1.7e-31 103.7 0.1 2 120 5 123 4 123 0.98 # 81622 # 82644 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_4 - 274 CbiA PF01656.18 195 4.9e-10 33.6 0.2 1 1 2.7e-12 8.1e-10 32.9 0.2 1 161 8 204 8 227 0.70 # 2193 # 3014 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.366 1_56 - 308 Polysacc_synt_2 PF02719.10 294 3e-19 63.4 1.5 1 1 7.1e-20 2.2e-17 57.3 1.5 62 255 45 250 3 263 0.78 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_95 - 364 Methyltransf_25 PF13649.1 101 3.6e-06 21.8 0.0 1 1 3.1e-08 9.4e-06 20.5 0.0 3 73 38 103 36 138 0.83 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_201 - 257 AAA_14 PF13173.1 128 0.00065 14.1 0.1 1 2 7e-05 0.021 9.2 0.1 3 22 33 52 31 58 0.85 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_201 - 257 AAA_14 PF13173.1 128 0.00065 14.1 0.1 2 2 0.0071 2.2 2.7 0.0 84 118 55 89 50 99 0.83 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_126 - 689 AAA_29 PF13555.1 62 6.7e-08 26.5 0.1 1 1 8.2e-10 1.2e-07 25.6 0.1 2 51 4 52 3 66 0.84 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_201 - 257 AAA_29 PF13555.1 62 2.4e-05 18.3 0.3 1 1 3.9e-07 6e-05 17.0 0.3 19 46 29 55 18 64 0.79 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_127 - 572 UvrD_C PF13361.1 351 6.7e-10 33.4 11.1 1 3 0.054 16 -0.8 0.5 96 295 72 87 11 184 0.64 # 133901 # 135616 # 1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.274 1_127 - 572 UvrD_C PF13361.1 351 6.7e-10 33.4 11.1 2 3 0.00016 0.048 7.5 2.4 2 121 284 424 283 449 0.64 # 133901 # 135616 # 1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.274 1_127 - 572 UvrD_C PF13361.1 351 6.7e-10 33.4 11.1 3 3 5e-11 1.5e-08 28.9 1.1 292 346 489 543 397 547 0.82 # 133901 # 135616 # 1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.274 1_176 - 272 KR PF08659.5 181 4.1e-12 40.6 0.0 1 1 4.1e-14 6.2e-12 40.0 0.0 2 161 3 157 3 171 0.89 # 185099 # 185914 # 1 # ID=1_176;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355 1_56 - 308 KR PF08659.5 181 7.3e-05 17.0 0.0 1 2 0.002 0.3 5.2 0.0 5 29 5 29 3 36 0.90 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_56 - 308 KR PF08659.5 181 7.3e-05 17.0 0.0 2 2 9e-05 0.014 9.5 0.0 73 142 50 114 43 119 0.79 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_57 - 414 KH_3 PF13014.1 43 0.0019 12.4 0.0 1 1 1.5e-05 0.0046 11.1 0.0 13 32 307 323 305 333 0.83 # 58032 # 59273 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_3 - 328 Sigma54_activat PF00158.21 168 2e-06 21.9 0.0 1 1 1.3e-08 4e-06 20.9 0.0 3 55 216 268 214 280 0.89 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_201 - 257 MMR_HSR1 PF01926.18 116 0.0018 12.7 1.1 1 1 2.7e-05 0.0041 11.6 1.1 2 21 35 54 34 241 0.87 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_126 - 689 MMR_HSR1 PF01926.18 116 0.0032 11.9 4.7 1 1 1.1e-05 0.0017 12.8 1.2 3 30 28 61 26 234 0.80 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_95 - 364 N6_Mtase PF02384.11 311 2.5e-06 21.2 0.8 1 2 5.8e-08 1.8e-05 18.4 0.0 26 149 10 121 5 152 0.74 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_95 - 364 N6_Mtase PF02384.11 311 2.5e-06 21.2 0.8 2 2 0.025 7.8 -0.1 0.2 226 275 182 229 166 255 0.75 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_201 - 257 DUF258 PF03193.11 161 1.2e-05 19.0 0.3 1 1 1.1e-07 1.6e-05 18.6 0.3 23 66 19 63 5 172 0.80 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_3 - 328 DUF258 PF03193.11 161 0.0004 14.1 0.0 1 1 5.9e-06 0.00091 12.9 0.0 5 59 204 259 200 299 0.85 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_18 - 1167 TraG-D_C PF12696.2 128 8.3e-13 42.8 0.0 1 1 2.7e-15 8.3e-13 42.8 0.0 3 125 539 659 538 661 0.85 # 21998 # 25498 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.343 1_54 - 443 NAD_binding_2 PF03446.10 163 3.8e-10 34.3 0.0 1 1 1e-11 1.5e-09 32.3 0.0 3 105 23 151 21 166 0.77 # 54633 # 55961 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.296 1_56 - 308 NAD_binding_2 PF03446.10 163 0.00089 13.6 0.0 1 1 8.8e-06 0.0013 13.0 0.0 2 42 1 42 1 101 0.81 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_4 - 274 AAA_31 PF13614.1 157 4.2e-21 70.0 0.1 1 1 4.4e-23 6.8e-21 69.3 0.1 1 152 6 171 6 174 0.89 # 2193 # 3014 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.366 1_10 - 500 AAA_31 PF13614.1 157 1.4e-06 22.8 0.1 1 1 2e-08 3e-06 21.7 0.1 1 152 226 381 226 386 0.80 # 9978 # 11477 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.344 1_201 - 257 AAA_33 PF13671.1 143 0.00039 14.8 0.5 1 1 4.6e-06 0.0014 13.0 0.5 4 20 37 53 34 206 0.63 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_95 - 364 Methyltransf_26 PF13659.1 117 4.8e-15 50.1 0.0 1 1 3.8e-17 1.1e-14 48.9 0.0 4 116 36 144 34 145 0.88 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_79 - 341 2-Hacid_dh_C PF02826.14 178 0.00021 14.9 0.0 1 1 3.5e-06 0.00036 14.2 0.0 38 116 5 89 1 91 0.71 # 81622 # 82644 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_250 - 102 2-Hacid_dh_C PF02826.14 178 0.00055 13.6 0.1 1 1 9.4e-06 0.00096 12.8 0.1 37 97 4 55 1 60 0.85 # 266168 # 266473 # -1 # ID=1_250;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.353 1_56 - 308 2-Hacid_dh_C PF02826.14 178 0.00068 13.3 0.0 1 1 1.2e-05 0.0013 12.4 0.0 38 97 2 64 1 81 0.81 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_201 - 257 AAA_30 PF13604.1 196 0.00036 14.6 0.2 1 1 9e-06 0.0014 12.7 0.2 17 44 31 58 25 202 0.73 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_3 - 328 AAA_30 PF13604.1 196 0.0014 12.7 0.2 1 1 2.9e-05 0.0045 11.0 0.1 16 50 233 267 194 269 0.84 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_3 - 328 FtsK_SpoIIIE PF01580.13 205 4.3e-05 17.5 0.0 1 1 2.4e-07 7.2e-05 16.8 0.0 32 58 229 255 205 264 0.77 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_95 - 364 MTS PF05175.9 170 6.8e-10 33.0 0.0 1 1 3.7e-12 1.1e-09 32.3 0.0 23 141 22 144 7 168 0.77 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_126 - 689 DUF2813 PF11398.3 373 3.8e-09 30.5 4.0 1 3 5.7e-08 1.7e-05 18.5 0.0 1 100 1 103 1 117 0.80 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_126 - 689 DUF2813 PF11398.3 373 3.8e-09 30.5 4.0 2 3 0.092 28 -2.0 0.1 217 265 211 259 164 264 0.62 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_126 - 689 DUF2813 PF11398.3 373 3.8e-09 30.5 4.0 3 3 5.3e-06 0.0016 12.0 0.0 286 346 339 403 312 417 0.81 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_201 - 257 ABC_tran PF00005.22 137 9.9e-37 120.8 0.1 1 1 1.4e-38 1.4e-36 120.3 0.1 1 136 22 170 22 171 0.97 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_126 - 689 ABC_tran PF00005.22 137 1.3e-05 20.0 0.3 1 1 1.1e-06 0.00011 17.0 0.0 5 45 19 59 16 159 0.72 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_3 - 328 ABC_tran PF00005.22 137 0.002 12.9 0.0 1 1 5.6e-05 0.0057 11.4 0.0 6 47 230 271 225 301 0.83 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_56 - 308 THF_DHG_CYH_C PF02882.14 161 4.5e-05 17.1 0.2 1 1 3.4e-07 0.0001 15.9 0.2 39 132 3 94 1 119 0.90 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_112 - 215 DNA_mis_repair PF01119.14 119 0.00046 14.1 0.0 1 2 3e-05 0.009 10.0 0.0 78 101 71 93 51 105 0.77 # 121124 # 121768 # 1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.366 1_112 - 215 DNA_mis_repair PF01119.14 119 0.00046 14.1 0.0 2 2 0.0098 3 1.8 0.0 7 39 174 211 169 214 0.80 # 121124 # 121768 # 1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.366 1_95 - 364 Cons_hypoth95 PF03602.10 183 0.00082 13.3 0.0 1 1 5.5e-06 0.0017 12.2 0.0 93 141 79 124 25 137 0.76 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_56 - 308 NAD_binding_4 PF07993.7 249 1.9e-15 50.9 0.1 1 2 9e-05 0.028 7.8 0.1 3 23 7 27 5 32 0.84 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_56 - 308 NAD_binding_4 PF07993.7 249 1.9e-15 50.9 0.1 2 2 6.3e-15 1.9e-12 41.1 0.0 77 211 48 175 45 196 0.84 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_54 - 443 UDPG_MGDP_dh_N PF03721.9 185 5.6e-44 144.2 0.4 1 1 5.8e-46 8.8e-44 143.6 0.4 3 179 24 201 22 224 0.93 # 54633 # 55961 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.296 1_56 - 308 UDPG_MGDP_dh_N PF03721.9 185 0.0012 12.7 0.0 1 1 1.4e-05 0.0021 11.9 0.0 1 36 1 37 1 45 0.89 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_127 - 572 AAA_19 PF13245.1 76 4.4e-07 24.1 0.0 1 1 5.9e-09 9e-07 23.1 0.0 17 76 26 89 17 89 0.85 # 133901 # 135616 # 1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.274 1_3 - 328 AAA_19 PF13245.1 76 0.00056 14.2 0.0 1 1 8.6e-06 0.0013 13.0 0.0 6 48 231 268 226 274 0.73 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_56 - 308 RmlD_sub_bind PF04321.12 287 6.4e-29 95.1 0.0 1 1 5.1e-31 7.7e-29 94.9 0.0 1 235 1 247 1 262 0.90 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_176 - 272 RmlD_sub_bind PF04321.12 287 1.6e-05 18.4 0.0 1 1 1.7e-07 2.6e-05 17.7 0.0 2 88 2 114 1 132 0.83 # 185099 # 185914 # 1 # ID=1_176;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355 1_56 - 308 NAD_binding_10 PF13460.1 183 1.9e-16 55.1 0.0 1 1 1.7e-18 2.6e-16 54.6 0.0 1 149 3 165 3 188 0.81 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_176 - 272 NAD_binding_10 PF13460.1 183 3.6e-09 31.3 0.0 1 1 4.1e-11 6.2e-09 30.6 0.0 1 100 4 134 4 234 0.66 # 185099 # 185914 # 1 # ID=1_176;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355 1_255 - 700 AAA_10 PF12846.2 304 7.8e-50 164.4 0.1 1 1 1.2e-51 1.3e-49 163.7 0.1 1 302 279 638 279 640 0.91 # 273825 # 275924 # -1 # ID=1_255;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.367 1_18 - 1167 AAA_10 PF12846.2 304 7.1e-10 33.2 0.1 1 1 1.5e-11 1.6e-09 32.1 0.1 3 267 220 578 218 600 0.69 # 21998 # 25498 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.343 1_201 - 257 AAA_10 PF12846.2 304 0.0014 12.6 0.9 1 1 2.9e-05 0.003 11.5 0.4 6 22 37 53 33 66 0.83 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_176 - 272 adh_short_C2 PF13561.1 241 5.3e-25 83.0 0.0 1 1 2.1e-27 6.5e-25 82.7 0.0 5 192 10 191 8 239 0.87 # 185099 # 185914 # 1 # ID=1_176;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355 1_201 - 257 SbcCD_C PF13558.1 90 0.00012 16.4 0.0 1 1 2.7e-06 0.00082 13.8 0.0 23 89 133 186 116 187 0.75 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_56 - 308 3Beta_HSD PF01073.14 280 1.3e-27 90.7 0.6 1 1 6e-30 1.8e-27 90.2 0.6 2 264 5 239 4 251 0.82 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_41 - 283 ThiF PF00899.16 136 3.1e-13 44.2 0.0 1 1 1.8e-15 5.5e-13 43.4 0.0 4 116 16 148 15 164 0.78 # 40473 # 41321 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.365 1_3 - 328 ResIII PF04851.10 184 1.3e-06 22.8 0.0 1 1 1.9e-08 2.9e-06 21.7 0.0 13 64 222 276 183 304 0.81 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_97 - 560 ResIII PF04851.10 184 0.009 10.3 6.3 1 2 0.0035 0.54 4.5 0.0 4 70 262 332 259 403 0.71 # 104226 # 105905 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_97 - 560 ResIII PF04851.10 184 0.009 10.3 6.3 2 2 0.00031 0.047 8.0 0.5 137 157 511 549 391 553 0.74 # 104226 # 105905 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.359 1_95 - 364 Methyltransf_31 PF13847.1 152 2.1e-06 21.9 0.0 1 1 1.1e-08 3.4e-06 21.2 0.0 7 111 36 144 30 181 0.80 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_127 - 572 Viral_helicase1 PF01443.13 234 6.7e-09 30.0 0.2 1 3 0.0027 0.82 3.6 0.0 7 39 28 55 25 104 0.61 # 133901 # 135616 # 1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.274 1_127 - 572 Viral_helicase1 PF01443.13 234 6.7e-09 30.0 0.2 2 3 0.00068 0.21 5.5 0.0 62 105 221 265 206 340 0.75 # 133901 # 135616 # 1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.274 1_127 - 572 Viral_helicase1 PF01443.13 234 6.7e-09 30.0 0.2 3 3 4.1e-07 0.00013 16.1 0.0 155 231 455 542 417 544 0.75 # 133901 # 135616 # 1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.274 1_56 - 308 Epimerase PF01370.16 236 4.2e-52 171.4 0.0 1 1 3.2e-54 4.9e-52 171.1 0.0 3 236 5 225 3 225 0.95 # 57134 # 58057 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_176 - 272 Epimerase PF01370.16 236 1.9e-06 21.9 0.0 1 1 2e-08 3e-06 21.3 0.0 1 77 4 85 4 166 0.83 # 185099 # 185914 # 1 # ID=1_176;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355 1_18 - 1167 DEAD PF00270.24 169 0.00035 14.6 0.0 1 1 9.8e-06 0.0015 12.5 0.0 18 69 222 298 204 348 0.76 # 21998 # 25498 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.343 1_3 - 328 DEAD PF00270.24 169 0.0012 12.8 0.1 1 1 2.5e-05 0.0039 11.2 0.0 13 54 234 272 221 278 0.73 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_3 - 328 DUF853 PF05872.7 504 0.00027 13.8 0.0 1 1 1.6e-06 0.00049 13.0 0.0 22 46 236 260 213 270 0.77 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_18 - 1167 TrwB_AAD_bind PF10412.4 386 4e-10 33.3 0.7 1 3 0.06 9.2 -0.8 0.0 9 32 212 235 207 242 0.77 # 21998 # 25498 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.343 1_18 - 1167 TrwB_AAD_bind PF10412.4 386 4e-10 33.3 0.7 2 3 3.4e-11 5.2e-09 29.6 0.0 169 383 465 678 449 680 0.74 # 21998 # 25498 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.343 1_18 - 1167 TrwB_AAD_bind PF10412.4 386 4e-10 33.3 0.7 3 3 0.096 15 -1.5 0.1 143 180 1064 1100 1036 1104 0.81 # 21998 # 25498 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.343 1_3 - 328 TrwB_AAD_bind PF10412.4 386 9e-07 22.2 0.3 1 2 0.029 4.4 0.2 0.0 212 280 146 219 143 228 0.72 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_3 - 328 TrwB_AAD_bind PF10412.4 386 9e-07 22.2 0.3 2 2 6.3e-08 9.6e-06 18.8 0.0 14 51 234 271 225 289 0.88 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_127 - 572 AAA_11 PF13086.1 236 2.3e-06 21.8 0.2 1 1 7.8e-08 1.2e-05 19.5 0.2 13 228 16 259 5 259 0.52 # 133901 # 135616 # 1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.274 1_12 - 379 AAA_11 PF13086.1 236 0.023 8.7 4.9 1 1 0.0001 0.016 9.2 3.4 91 182 160 251 136 261 0.65 # 13160 # 14296 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.320 1_3 - 328 Sigma54_activ_2 PF14532.1 138 1.3e-06 23.0 0.0 1 1 8.7e-09 2.7e-06 22.0 0.0 2 50 216 264 215 278 0.86 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_3 - 328 Pox_A32 PF04665.7 241 0.00077 13.3 0.0 1 1 5.2e-06 0.0016 12.2 0.0 11 64 233 284 226 302 0.83 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_54 - 443 PDH PF02153.12 258 0.00099 12.5 0.0 1 1 6e-06 0.0018 11.6 0.0 11 55 62 105 54 116 0.87 # 54633 # 55961 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.296 1_126 - 689 GTP_EFTU PF00009.22 188 1.1e-05 19.5 0.2 1 1 9.2e-08 2.8e-05 18.1 0.2 7 64 28 87 25 108 0.77 # 131856 # 133922 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.290 1_3 - 328 RNA_helicase PF00910.17 107 0.00031 15.4 0.0 1 1 3e-06 0.00091 13.9 0.0 1 25 238 262 238 286 0.76 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_3 - 328 UPF0079 PF02367.12 123 0.00033 14.8 0.0 1 1 2.4e-06 0.00072 13.7 0.0 8 42 228 262 221 277 0.85 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_176 - 272 TrkA_N PF02254.13 116 0.001 13.5 0.2 1 1 8.1e-06 0.0025 12.3 0.1 8 62 12 67 4 97 0.89 # 185099 # 185914 # 1 # ID=1_176;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355 1_22 - 328 S1 PF00575.18 74 0.00026 15.6 3.9 1 3 0.047 14 0.4 0.0 20 40 82 102 77 129 0.82 # 27597 # 28580 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.391 1_22 - 328 S1 PF00575.18 74 0.00026 15.6 3.9 2 3 5.8e-05 0.018 9.7 0.4 5 68 156 218 152 221 0.89 # 27597 # 28580 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.391 1_22 - 328 S1 PF00575.18 74 0.00026 15.6 3.9 3 3 0.003 0.91 4.2 0.4 6 27 244 266 240 269 0.88 # 27597 # 28580 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.391 1_127 - 572 UvrD-helicase PF00580.16 315 1e-32 108.2 7.4 1 1 2.3e-34 3.6e-32 106.3 3.3 14 311 20 276 10 279 0.81 # 133901 # 135616 # 1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.274 1_3 - 328 UvrD-helicase PF00580.16 315 0.013 9.3 3.5 1 2 0.048 7.3 0.2 0.1 109 169 31 99 13 218 0.60 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_3 - 328 UvrD-helicase PF00580.16 315 0.013 9.3 3.5 2 2 0.00014 0.021 8.6 0.3 8 34 230 256 225 268 0.80 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_201 - 257 NACHT PF05729.7 166 0.00095 13.3 0.1 1 1 1e-05 0.0031 11.6 0.0 3 20 35 52 33 60 0.86 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_95 - 364 Lambda_tail_I PF06805.7 82 0.00072 13.9 0.1 1 2 0.088 27 -0.8 0.0 33 52 168 187 164 201 0.74 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_95 - 364 Lambda_tail_I PF06805.7 82 0.00072 13.9 0.1 2 2 1.3e-05 0.0039 11.5 0.0 17 54 212 253 208 260 0.89 # 102820 # 103911 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.367 1_201 - 257 AAA_25 PF13481.1 194 0.00021 15.2 0.2 1 2 2e-05 0.003 11.4 0.0 30 50 29 49 23 67 0.89 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_201 - 257 AAA_25 PF13481.1 194 0.00021 15.2 0.2 2 2 0.021 3.2 1.6 0.0 161 188 174 201 148 205 0.81 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_3 - 328 AAA_25 PF13481.1 194 0.00083 13.3 0.0 1 1 9.7e-06 0.0015 12.4 0.0 35 74 237 273 201 278 0.72 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_3 - 328 AAA_28 PF13521.1 163 0.00038 14.9 0.0 1 1 7e-06 0.0011 13.5 0.0 2 34 238 275 237 319 0.71 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_201 - 257 AAA_28 PF13521.1 163 0.0038 11.7 0.7 1 1 6.3e-05 0.0097 10.3 0.1 3 22 36 55 34 65 0.79 # 219636 # 220406 # -1 # ID=1_201;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.379 1_3 - 328 AAA_5 PF07728.9 139 0.00059 14.1 0.0 1 1 3.7e-06 0.0011 13.1 0.0 1 28 237 266 237 278 0.83 # 1194 # 2177 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_4 - 274 APS_kinase PF01583.15 157 0.0002 15.5 0.0 1 1 1.3e-06 0.00039 14.6 0.0 10 55 14 59 6 75 0.85 # 2193 # 3014 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.366 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/79b1058b-eb6d-4e1f-9e7a-ec30273748c1 # Target file: checkm_output/bins/pGCA_002222555.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002222555.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/79b1058b-eb6d-4e1f-9e7a-ec30273748c1 checkm_output/bins/pGCA_002222555.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:49:24 2020 # [ok]