# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_33 - 469 UPF0020 PF01170.13 180 2e-06 21.8 0.0 1 1 2.6e-08 3.5e-06 21.0 0.0 30 118 152 253 121 281 0.77 # 29789 # 31195 # 1 # ID=2_33;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_4 - 597 UPF0020 PF01170.13 180 9.5e-06 19.6 0.0 1 1 1.4e-07 1.9e-05 18.6 0.0 30 118 151 252 120 275 0.76 # 2072 # 3862 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.619 3_27 - 358 cobW PF02492.14 178 0.0009 13.0 0.0 1 1 5.4e-06 0.0015 12.3 0.0 2 30 175 203 174 209 0.78 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_45 - 434 MipZ PF09140.6 261 3.5e-13 43.5 2.5 1 3 5.2e-07 4.7e-05 16.9 0.0 5 43 138 175 134 184 0.88 # 43052 # 44353 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_45 - 434 MipZ PF09140.6 261 3.5e-13 43.5 2.5 2 3 3e-09 2.7e-07 24.2 0.0 83 135 249 301 223 307 0.84 # 43052 # 44353 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_45 - 434 MipZ PF09140.6 261 3.5e-13 43.5 2.5 3 3 0.054 4.9 0.4 0.3 22 54 373 405 367 424 0.74 # 43052 # 44353 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.609 2_14 - 209 MipZ PF09140.6 261 5.2e-12 39.6 0.5 1 2 2.2e-11 2e-09 31.2 0.1 4 135 4 115 1 130 0.77 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 2_14 - 209 MipZ PF09140.6 261 5.2e-12 39.6 0.5 2 2 0.069 6.2 0.1 0.0 212 232 170 190 137 202 0.70 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 3_18 - 287 MipZ PF09140.6 261 5e-09 29.9 0.3 1 2 1e-07 9.4e-06 19.1 0.1 2 45 3 47 2 52 0.85 # 11858 # 12718 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.589 3_18 - 287 MipZ PF09140.6 261 5e-09 29.9 0.3 2 2 0.00015 0.013 8.8 0.0 73 129 108 164 84 179 0.78 # 11858 # 12718 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.589 1_45 - 434 YhjQ PF06564.7 244 3.1e-07 24.2 0.0 1 1 1.1e-08 3e-06 21.0 0.0 4 147 136 294 133 306 0.70 # 43052 # 44353 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.609 5_9 - 118 SSB PF00436.20 104 1.7e-19 64.0 0.0 1 1 1.4e-21 1.9e-19 63.8 0.0 4 97 9 99 7 106 0.89 # 4491 # 4844 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.607 3_16 - 124 SSB PF00436.20 104 1.8e-14 47.8 0.0 1 1 1.5e-16 2.1e-14 47.6 0.0 2 103 2 102 1 103 0.92 # 11098 # 11469 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.575 1_123 - 993 UvrD_C_2 PF13538.1 104 8.4e-12 39.5 0.1 1 1 4.3e-13 5.8e-11 36.8 0.0 3 103 812 917 810 918 0.75 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_103 - 508 UvrD_C_2 PF13538.1 104 9.6e-08 26.5 0.9 1 1 3.7e-09 5e-07 24.2 0.9 54 101 409 480 339 482 0.74 # 95504 # 97027 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.597 1_61 - 540 DUF87 PF01935.12 229 1.2e-05 19.5 0.0 1 1 4.3e-07 2.9e-05 18.3 0.0 3 50 244 292 242 303 0.75 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_122 - 525 DUF87 PF01935.12 229 3.9e-05 17.8 0.0 1 1 9.3e-07 6.3e-05 17.2 0.0 24 76 141 190 132 315 0.76 # 116311 # 117885 # 1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.613 3_27 - 358 DUF87 PF01935.12 229 0.0001 16.5 0.0 1 1 2.2e-06 0.00015 15.9 0.0 28 49 178 199 171 272 0.90 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_53 - 398 DUF87 PF01935.12 229 0.00066 13.8 0.0 1 1 1.6e-05 0.0011 13.1 0.0 28 54 161 187 159 225 0.90 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 Septin PF00735.13 281 0.00062 13.1 0.0 1 1 3.9e-06 0.001 12.4 0.0 7 29 176 198 171 235 0.82 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_53 - 398 AAA_22 PF13401.1 131 8.9e-06 20.2 0.0 1 1 5.8e-07 2.3e-05 18.9 0.0 4 48 156 198 153 245 0.74 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 AAA_22 PF13401.1 131 9.7e-06 20.1 0.0 1 1 4.6e-07 1.8e-05 19.2 0.0 5 42 174 205 170 249 0.78 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_64 - 323 AAA_22 PF13401.1 131 1.4e-05 19.6 0.0 1 1 7.2e-07 2.8e-05 18.6 0.0 3 31 112 140 108 217 0.80 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_96 - 462 AAA_22 PF13401.1 131 0.00014 16.3 0.1 1 1 1.2e-05 0.00048 14.6 0.0 5 117 218 368 214 376 0.56 # 87520 # 88905 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_61 - 540 AAA_22 PF13401.1 131 0.00079 13.9 0.0 1 1 5.6e-05 0.0021 12.5 0.0 5 35 264 294 263 370 0.78 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_123 - 993 AAA_22 PF13401.1 131 0.0011 13.4 3.7 1 1 0.00033 0.013 10.0 0.4 6 125 504 611 499 617 0.69 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 4_6 - 830 AAA_22 PF13401.1 131 0.0024 12.3 0.0 1 1 0.00038 0.015 9.8 0.0 9 36 454 481 448 544 0.80 # 2653 # 5142 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.590 3_27 - 358 ATP_bind_1 PF03029.12 238 0.00031 14.6 0.0 1 1 3.3e-06 0.00045 14.1 0.0 1 25 178 202 178 206 0.86 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_53 - 398 ATP_bind_1 PF03029.12 238 0.0017 12.2 0.0 1 1 1.9e-05 0.0025 11.6 0.0 1 30 161 191 161 205 0.77 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 5_12 - 273 Methyltransf_11 PF08241.7 95 0.0019 13.0 0.0 1 1 1.7e-05 0.0046 11.8 0.0 3 59 37 88 35 114 0.88 # 5571 # 6389 # 1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.623 3_27 - 358 PRK PF00485.13 194 0.00016 15.6 0.0 1 1 1e-06 0.00027 14.8 0.0 1 26 175 200 175 232 0.89 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_5 - 386 DNA_methylase PF00145.12 335 1.2e-52 173.4 0.0 1 3 8e-34 1.1e-31 104.5 0.0 1 131 1 138 1 141 0.94 # 3614 # 4771 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.653 3_5 - 386 DNA_methylase PF00145.12 335 1.2e-52 173.4 0.0 2 3 4.6e-09 6.2e-07 23.1 0.0 135 168 166 199 143 225 0.84 # 3614 # 4771 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.653 3_5 - 386 DNA_methylase PF00145.12 335 1.2e-52 173.4 0.0 3 3 5.2e-15 7e-13 42.6 0.0 280 330 317 367 260 372 0.84 # 3614 # 4771 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.653 1_13 - 499 DNA_methylase PF00145.12 335 1e-17 58.5 0.0 1 1 8.3e-19 1.1e-16 55.1 0.0 6 333 166 476 162 478 0.72 # 11237 # 12733 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.639 2_14 - 209 SRP54 PF00448.17 196 2.7e-06 21.2 0.1 1 1 1.9e-08 5.1e-06 20.3 0.1 11 155 11 149 2 176 0.62 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 3_26 - 909 TIGR00855 TIGR00855 125 5e-07 24.2 0.4 1 1 1.8e-09 5e-07 24.2 0.4 57 123 287 354 272 356 0.92 # 20063 # 22789 # -1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 1_53 - 398 KAP_NTPase PF07693.9 325 0.0012 12.1 0.0 1 1 1.2e-05 0.0016 11.7 0.0 23 59 159 195 152 291 0.81 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 KAP_NTPase PF07693.9 325 0.0018 11.5 0.0 1 1 1.9e-05 0.0026 11.0 0.0 21 63 174 232 166 253 0.84 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 5_14 - 408 N6_N4_Mtase PF01555.13 231 1.3e-24 81.3 0.0 1 1 5.9e-27 1.6e-24 80.9 0.0 2 223 135 388 134 395 0.82 # 6970 # 8193 # 1 # ID=5_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 3_27 - 358 AAA_17 PF13207.1 121 4.6e-05 18.6 0.0 1 1 1.7e-06 7.6e-05 17.9 0.0 1 23 175 197 175 293 0.82 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_125 - 396 AAA_17 PF13207.1 121 0.00018 16.7 0.3 1 1 1e-05 0.00047 15.3 0.2 2 78 37 138 36 299 0.76 # 121636 # 122823 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 1_96 - 462 AAA_17 PF13207.1 121 0.00037 15.7 0.3 1 1 0.00029 0.013 10.6 0.0 2 78 220 313 219 434 0.69 # 87520 # 88905 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_53 - 398 AAA_17 PF13207.1 121 0.00072 14.7 0.0 1 1 3.4e-05 0.0015 13.6 0.0 1 16 158 173 158 244 0.91 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 1_64 - 323 AAA_17 PF13207.1 121 0.0012 13.9 0.0 1 1 8.9e-05 0.004 12.3 0.0 1 19 115 133 115 216 0.91 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_61 - 540 AAA_17 PF13207.1 121 0.0014 13.8 0.0 1 1 6.4e-05 0.0029 12.8 0.0 3 77 267 350 265 398 0.57 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 2_18 - 885 AAA_21 PF13304.1 303 4.8e-09 30.8 0.1 1 2 0.00034 0.045 7.9 0.0 5 24 288 307 284 341 0.75 # 16535 # 19189 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 2_18 - 885 AAA_21 PF13304.1 303 4.8e-09 30.8 0.1 2 2 5.1e-08 6.9e-06 20.5 0.0 231 301 759 826 716 828 0.83 # 16535 # 19189 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 3_27 - 358 AAA_21 PF13304.1 303 0.0011 13.2 0.0 1 1 1.2e-05 0.0016 12.7 0.0 2 42 176 207 175 248 0.70 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_27 - 358 Miro PF08477.8 119 0.00021 16.1 0.0 1 1 3.2e-06 0.00043 15.1 0.0 2 25 176 199 175 235 0.83 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_53 - 398 Miro PF08477.8 119 0.00047 15.0 0.0 1 1 6.4e-06 0.00086 14.1 0.0 2 36 159 202 158 245 0.75 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 MobB PF03205.9 140 3.5e-05 17.8 0.0 1 1 4.5e-07 6e-05 17.1 0.0 1 36 174 208 174 211 0.82 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_53 - 398 MobB PF03205.9 140 4.2e-05 17.6 0.0 1 1 5.8e-07 7.9e-05 16.7 0.0 2 27 158 183 157 196 0.88 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 1_9 - 676 Helicase_C PF00271.26 78 3.3e-09 30.9 0.0 1 1 4.5e-11 6.1e-09 30.0 0.0 3 78 523 600 521 600 0.95 # 6960 # 8987 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_23 - 1750 Helicase_C PF00271.26 78 0.0015 12.8 0.2 1 1 3.5e-05 0.0048 11.1 0.2 19 77 1139 1205 1101 1206 0.73 # 19529 # 24778 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_45 - 434 ArsA_ATPase PF02374.10 305 7.6e-08 26.0 0.1 1 2 3.6e-09 4.9e-07 23.3 0.0 9 46 142 179 136 188 0.91 # 43052 # 44353 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.609 1_45 - 434 ArsA_ATPase PF02374.10 305 7.6e-08 26.0 0.1 2 2 0.057 7.7 -0.3 0.0 124 137 262 275 248 282 0.81 # 43052 # 44353 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.609 2_14 - 209 ArsA_ATPase PF02374.10 305 9e-08 25.7 0.2 1 1 1.1e-09 1.5e-07 25.0 0.2 5 42 5 41 1 48 0.86 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 1_123 - 993 PhoH PF02562.11 205 8.6e-09 29.2 4.2 1 2 1.1e-07 2.9e-05 17.7 0.5 4 47 485 529 483 534 0.87 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_123 - 993 PhoH PF02562.11 205 8.6e-09 29.2 4.2 2 2 5.3e-06 0.0014 12.2 0.2 121 182 576 635 561 656 0.73 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 3_27 - 358 T2SE PF00437.15 272 9.7e-66 215.7 0.0 1 1 1.7e-67 1.1e-65 215.5 0.0 3 270 25 328 23 330 0.97 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_61 - 540 T2SE PF00437.15 272 4e-40 131.7 0.0 1 1 8.1e-42 5.4e-40 131.2 0.0 12 271 134 414 125 415 0.85 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_53 - 398 T2SE PF00437.15 272 7.2e-29 94.8 0.0 1 1 2e-30 1.4e-28 93.8 0.0 129 248 157 285 145 309 0.84 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 1_64 - 323 T2SE PF00437.15 272 7.8e-24 78.3 0.5 1 1 1.6e-25 1.1e-23 77.8 0.5 118 242 105 232 68 262 0.84 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_125 - 396 Zeta_toxin PF06414.7 201 4.9e-63 206.2 0.3 1 1 7.9e-65 7.2e-63 205.6 0.3 2 199 22 216 21 218 0.98 # 121636 # 122823 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 3_27 - 358 Zeta_toxin PF06414.7 201 2.5e-05 17.7 0.0 1 1 4.3e-07 3.9e-05 17.1 0.0 17 49 174 207 166 231 0.83 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_64 - 323 Zeta_toxin PF06414.7 201 0.0021 11.5 0.1 1 1 3.6e-05 0.0033 10.8 0.1 12 45 109 143 100 150 0.72 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 2_18 - 885 SMC_N PF02463.14 220 3.1e-09 30.6 0.0 1 1 6.5e-11 1.8e-08 28.2 0.0 18 205 276 830 271 844 0.91 # 16535 # 19189 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_119 - 352 Phe_tRNA-synt_N PF02912.13 73 0.00097 13.2 10.0 1 2 2.9e-05 0.0039 11.3 0.1 9 65 27 81 20 86 0.84 # 111026 # 112081 # -1 # ID=1_119;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.687 1_119 - 352 Phe_tRNA-synt_N PF02912.13 73 0.00097 13.2 10.0 2 2 0.0013 0.17 6.0 0.9 47 69 89 111 83 113 0.86 # 111026 # 112081 # -1 # ID=1_119;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.687 2_4 - 352 Phe_tRNA-synt_N PF02912.13 73 0.014 9.4 12.2 1 2 0.0001 0.014 9.5 0.1 9 55 27 71 21 86 0.78 # 4677 # 5732 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.676 2_4 - 352 Phe_tRNA-synt_N PF02912.13 73 0.014 9.4 12.2 2 2 0.0016 0.22 5.7 1.6 46 70 88 112 73 113 0.87 # 4677 # 5732 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.676 2_14 - 209 VirC1 PF07015.6 231 5.5e-10 33.0 0.2 1 1 2.4e-12 6.6e-10 32.7 0.2 4 183 3 177 1 199 0.81 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 2_14 - 209 Fer4_NifH PF00142.13 273 2.7e-06 21.0 0.0 1 1 4.7e-08 6.3e-06 19.8 0.0 4 42 5 42 3 53 0.89 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 1_45 - 434 Fer4_NifH PF00142.13 273 4.2e-05 17.1 0.0 1 1 7.2e-07 9.7e-05 15.9 0.0 8 43 142 178 138 195 0.85 # 43052 # 44353 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.609 3_27 - 358 Arch_ATPase PF01637.13 234 0.0018 12.3 0.0 1 1 1e-05 0.0027 11.7 0.0 17 44 172 197 162 231 0.86 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 4_14 - 138 tRNA_U5-meth_tr PF05958.6 352 0.003 10.5 0.0 1 1 1.2e-05 0.0032 10.4 0.0 35 83 74 123 43 134 0.82 # 11202 # 11615 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.623 1_64 - 323 AAA_16 PF13191.1 185 1.8e-06 22.4 0.4 1 1 1.7e-07 5.9e-06 20.7 0.1 18 106 107 209 100 272 0.69 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 3_27 - 358 AAA_16 PF13191.1 185 0.00015 16.1 0.0 1 1 8.8e-06 0.0003 15.1 0.0 26 51 175 200 156 228 0.85 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_61 - 540 AAA_16 PF13191.1 185 0.00023 15.5 0.2 1 1 2e-05 0.00069 13.9 0.0 19 52 258 293 253 370 0.87 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_125 - 396 AAA_16 PF13191.1 185 0.0003 15.1 0.0 1 1 2.7e-05 0.0009 13.6 0.0 16 97 25 103 18 116 0.66 # 121636 # 122823 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 1_96 - 462 AAA_16 PF13191.1 185 0.00099 13.4 0.9 1 1 8.2e-05 0.0028 12.0 0.3 22 161 215 343 205 373 0.59 # 87520 # 88905 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_53 - 398 AAA_16 PF13191.1 185 0.001 13.4 0.0 1 1 7e-05 0.0023 12.2 0.0 25 63 157 195 150 392 0.71 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 2_18 - 885 AAA_16 PF13191.1 185 0.0024 12.2 0.0 1 1 7.2e-05 0.0024 12.2 0.0 29 51 287 309 283 334 0.85 # 16535 # 19189 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_123 - 993 AAA_16 PF13191.1 185 0.0072 10.6 9.2 1 1 4.8e-05 0.0016 12.7 1.0 16 77 494 553 485 699 0.78 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 2_18 - 885 AAA_23 PF13476.1 202 8.5e-12 40.1 4.8 1 1 1e-12 5.7e-11 37.4 4.8 11 156 274 574 269 656 0.60 # 16535 # 19189 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 3_27 - 358 AAA_23 PF13476.1 202 3.6e-05 18.5 0.0 1 1 1e-06 5.6e-05 17.8 0.0 20 40 174 194 162 195 0.88 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_53 - 398 AAA_23 PF13476.1 202 3.9e-05 18.3 0.0 1 1 1.2e-06 6.7e-05 17.6 0.0 18 38 155 175 145 177 0.88 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 1_61 - 540 AAA_23 PF13476.1 202 0.00027 15.6 0.3 1 1 8.8e-06 0.00048 14.8 0.3 20 39 264 283 258 289 0.94 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_64 - 323 AAA_23 PF13476.1 202 0.0015 13.2 0.5 1 1 5.4e-05 0.0029 12.2 0.5 19 37 113 131 104 212 0.76 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 3_27 - 358 AAA_18 PF13238.1 129 5.8e-05 17.7 0.0 1 1 1.5e-06 0.0001 16.9 0.0 1 23 176 217 176 239 0.68 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_64 - 323 AAA_18 PF13238.1 129 0.00021 15.9 0.1 1 1 5e-06 0.00034 15.3 0.1 1 22 116 138 116 184 0.83 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_61 - 540 AAA_18 PF13238.1 129 0.0012 13.5 0.0 1 1 3.4e-05 0.0023 12.5 0.0 2 37 267 305 267 359 0.74 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_125 - 396 AAA_18 PF13238.1 129 0.0017 13.0 0.0 1 1 0.00014 0.0097 10.5 0.0 1 32 37 77 37 134 0.72 # 121636 # 122823 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 1_119 - 352 AAA_13 PF13166.1 712 1.6e-06 21.2 17.7 1 1 1.7e-08 1.6e-06 21.2 17.7 284 470 67 248 61 262 0.85 # 111026 # 112081 # -1 # ID=1_119;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.687 2_4 - 352 AAA_13 PF13166.1 712 2.3e-06 20.6 16.5 1 1 2.6e-08 2.3e-06 20.6 16.5 285 471 68 249 61 256 0.82 # 4677 # 5732 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.676 3_15 - 235 AAA_13 PF13166.1 712 0.0017 11.1 3.2 1 1 2.3e-05 0.0021 10.8 3.2 367 470 80 182 6 192 0.72 # 10281 # 10985 # 1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.695 1_45 - 434 CbiA PF01656.18 195 1.1e-30 100.9 0.0 1 1 2.4e-32 1.6e-30 100.2 0.0 3 191 138 368 136 372 0.73 # 43052 # 44353 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.609 2_14 - 209 CbiA PF01656.18 195 5.3e-25 82.3 0.2 1 1 1.6e-26 1.1e-24 81.2 0.2 2 193 4 176 3 178 0.78 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 3_18 - 287 CbiA PF01656.18 195 2.2e-24 80.2 0.1 1 1 4.5e-26 3.1e-24 79.8 0.1 1 161 4 208 4 246 0.73 # 11858 # 12718 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.589 2_9 - 236 CbiA PF01656.18 195 1.3e-06 22.2 0.1 1 2 0.0011 0.077 6.7 0.0 1 20 3 22 3 24 0.90 # 9121 # 9828 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.562 2_9 - 236 CbiA PF01656.18 195 1.3e-06 22.2 0.1 2 2 9.9e-06 0.00067 13.4 0.1 118 167 94 143 29 178 0.83 # 9121 # 9828 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.562 1_13 - 499 Methyltransf_25 PF13649.1 101 0.00049 14.8 0.0 1 1 4e-06 0.0011 13.7 0.0 4 73 166 238 164 258 0.82 # 11237 # 12733 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.639 1_96 - 462 KaiC PF06745.8 227 4.5e-07 23.5 0.0 1 1 1.1e-08 7.5e-07 22.8 0.0 1 127 200 339 200 435 0.74 # 87520 # 88905 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_53 - 398 KaiC PF06745.8 227 0.00014 15.3 0.0 1 1 3.5e-06 0.00024 14.6 0.0 16 71 153 208 146 220 0.89 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 KaiC PF06745.8 227 0.0011 12.4 0.0 1 1 5.3e-05 0.0036 10.7 0.0 19 60 173 210 163 220 0.74 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_64 - 323 KaiC PF06745.8 227 0.0021 11.5 0.1 1 1 5e-05 0.0034 10.8 0.1 20 51 114 145 110 155 0.83 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_64 - 323 AAA_14 PF13173.1 128 0.00035 14.8 0.0 1 1 7.5e-06 0.0005 14.3 0.0 2 46 113 157 112 226 0.81 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_61 - 540 AAA_14 PF13173.1 128 0.00049 14.3 0.0 1 1 1.6e-05 0.0011 13.2 0.0 4 35 265 300 262 365 0.84 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_53 - 398 AAA_14 PF13173.1 128 0.00072 13.8 0.0 1 1 2.7e-05 0.0018 12.5 0.0 2 45 156 201 155 245 0.73 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 AAA_14 PF13173.1 128 0.00099 13.3 0.0 1 1 2.2e-05 0.0015 12.8 0.0 2 39 173 208 172 267 0.76 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 2_18 - 885 AAA_29 PF13555.1 62 4.7e-05 17.2 0.1 1 1 4.6e-06 0.00025 14.9 0.0 10 51 271 311 266 318 0.79 # 16535 # 19189 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_53 - 398 AAA_29 PF13555.1 62 6e-05 16.9 0.0 1 1 2.3e-06 0.00013 15.8 0.0 23 43 157 176 151 178 0.83 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 1_61 - 540 AAA_29 PF13555.1 62 7.4e-05 16.6 0.1 1 1 2.7e-06 0.00015 15.6 0.1 25 44 265 284 256 293 0.86 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 3_27 - 358 AAA_29 PF13555.1 62 8.7e-05 16.3 0.0 1 1 3.1e-06 0.00017 15.4 0.0 18 44 171 194 164 199 0.83 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 4_6 - 830 AAA_29 PF13555.1 62 0.0022 11.9 0.0 1 1 0.00011 0.0061 10.4 0.0 17 40 444 466 433 480 0.82 # 2653 # 5142 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.590 3_27 - 358 AAA PF00004.24 132 0.00076 14.0 0.0 1 1 4.8e-06 0.0013 13.2 0.0 2 30 177 207 176 243 0.75 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_103 - 508 UvrD_C PF13361.1 351 2.6e-12 41.1 0.1 1 1 1.6e-14 4.2e-12 40.4 0.1 265 345 398 481 342 485 0.69 # 95504 # 97027 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.597 1_39 - 419 CobU PF02283.11 167 0.0017 12.1 0.7 1 1 1.4e-05 0.0037 11.0 0.7 29 66 140 178 129 190 0.74 # 37251 # 38507 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.632 3_27 - 358 Sigma54_activat PF00158.21 168 0.0001 16.1 0.0 1 1 1.3e-06 0.00017 15.4 0.0 14 54 165 204 155 215 0.85 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_64 - 323 Sigma54_activat PF00158.21 168 0.00026 14.8 0.0 1 1 3.8e-06 0.00051 13.8 0.0 11 51 102 142 94 156 0.86 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 2_33 - 469 N6_Mtase PF02384.11 311 7.7e-11 35.9 0.0 1 1 1.8e-12 1.6e-10 34.8 0.0 22 202 122 314 108 374 0.68 # 29789 # 31195 # 1 # ID=2_33;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_4 - 597 N6_Mtase PF02384.11 311 3.5e-10 33.7 0.0 1 1 8.3e-12 7.4e-10 32.6 0.0 22 201 121 312 106 368 0.69 # 2072 # 3862 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.619 5_12 - 273 N6_Mtase PF02384.11 311 0.0018 11.7 0.0 1 3 0.0055 0.49 3.6 0.0 27 68 9 52 2 61 0.84 # 5571 # 6389 # 1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.623 5_12 - 273 N6_Mtase PF02384.11 311 0.0018 11.7 0.0 2 3 0.05 4.5 0.5 0.0 111 140 77 102 62 116 0.74 # 5571 # 6389 # 1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.623 5_12 - 273 N6_Mtase PF02384.11 311 0.0018 11.7 0.0 3 3 0.0044 0.39 4.0 0.0 212 267 148 203 105 231 0.74 # 5571 # 6389 # 1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.623 3_27 - 358 DUF258 PF03193.11 161 0.00059 13.4 0.0 1 1 3.3e-06 0.00088 12.8 0.0 22 60 159 198 140 245 0.83 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_26 - 909 TraG-D_C PF12696.2 128 1.1e-24 81.0 0.0 1 1 2e-26 1.8e-24 80.4 0.0 1 127 473 595 473 596 0.90 # 20063 # 22789 # -1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 1_122 - 525 TraG-D_C PF12696.2 128 3.7e-22 72.9 0.0 1 1 7.7e-24 6.9e-22 72.0 0.0 1 127 368 490 368 491 0.92 # 116311 # 117885 # 1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.613 1_89 - 844 TraG-D_C PF12696.2 128 0.00013 16.2 0.0 1 1 3.4e-06 0.0003 15.0 0.0 2 85 421 503 420 529 0.84 # 80704 # 83235 # 1 # ID=1_89;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.621 1_45 - 434 AAA_31 PF13614.1 157 2e-10 35.1 0.0 1 1 4.1e-11 5.6e-09 30.4 0.0 3 152 136 298 134 302 0.81 # 43052 # 44353 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.609 2_14 - 209 AAA_31 PF13614.1 157 4.7e-08 27.4 0.0 1 1 2.3e-09 3.1e-07 24.8 0.0 7 40 7 39 2 44 0.87 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 1_125 - 396 AAA_33 PF13671.1 143 9.6e-06 19.8 1.1 1 2 7.6e-07 6.8e-05 17.1 0.1 2 123 37 165 36 183 0.76 # 121636 # 122823 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 1_125 - 396 AAA_33 PF13671.1 143 9.6e-06 19.8 1.1 2 2 0.07 6.3 1.0 0.2 29 68 224 264 211 301 0.64 # 121636 # 122823 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 1_53 - 398 AAA_33 PF13671.1 143 1.1e-05 19.6 0.0 1 1 3.2e-07 2.8e-05 18.3 0.0 1 21 158 178 158 249 0.75 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 AAA_33 PF13671.1 143 0.00044 14.5 0.0 1 1 7.8e-06 0.0007 13.8 0.0 1 24 175 198 175 250 0.90 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_96 - 462 DnaB_C PF03796.10 259 4.4e-105 344.5 0.0 1 1 2.2e-107 6e-105 344.0 0.0 1 255 199 452 199 455 0.99 # 87520 # 88905 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 2_33 - 469 Methyltransf_26 PF13659.1 117 5.7e-21 69.1 0.4 1 1 2.9e-22 1.5e-20 67.7 0.4 3 117 153 298 151 298 0.91 # 29789 # 31195 # 1 # ID=2_33;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_4 - 597 Methyltransf_26 PF13659.1 117 1.8e-20 67.5 0.4 1 1 1.1e-21 6e-20 65.8 0.4 3 117 152 297 150 297 0.91 # 2072 # 3862 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.619 5_12 - 273 Methyltransf_26 PF13659.1 117 2.5e-13 44.4 0.4 1 1 9.7e-15 5.2e-13 43.4 0.4 2 116 32 125 31 126 0.92 # 5571 # 6389 # 1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.623 1_23 - 1750 Methyltransf_26 PF13659.1 117 2.6e-09 31.4 0.2 1 1 6.4e-10 3.4e-08 27.8 0.0 4 115 288 396 285 398 0.76 # 19529 # 24778 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 3_5 - 386 Methyltransf_26 PF13659.1 117 3.1e-05 18.3 0.0 1 1 2.8e-06 0.00015 16.1 0.0 5 111 4 114 1 116 0.81 # 3614 # 4771 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.653 1_123 - 993 AAA_30 PF13604.1 196 2.2e-55 181.6 8.5 1 1 8.6e-57 5.8e-55 180.2 8.5 2 193 486 674 485 677 0.97 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_103 - 508 AAA_30 PF13604.1 196 4e-06 20.8 0.0 1 2 0.00029 0.02 8.8 0.0 11 40 14 43 9 83 0.79 # 95504 # 97027 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.597 1_103 - 508 AAA_30 PF13604.1 196 4e-06 20.8 0.0 2 2 0.00018 0.012 9.5 0.0 98 187 201 286 187 294 0.63 # 95504 # 97027 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.597 1_61 - 540 AAA_30 PF13604.1 196 8.8e-05 16.4 0.0 1 1 5.7e-06 0.00038 14.4 0.0 2 41 247 286 246 304 0.84 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 3_27 - 358 AAA_30 PF13604.1 196 0.00065 13.6 0.0 1 1 1.6e-05 0.0011 12.9 0.0 17 44 172 199 165 207 0.79 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_122 - 525 FtsK_SpoIIIE PF01580.13 205 1.1e-06 22.5 0.0 1 1 1e-07 6.8e-06 20.0 0.0 23 80 125 178 94 185 0.72 # 116311 # 117885 # 1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.613 1_61 - 540 FtsK_SpoIIIE PF01580.13 205 1.5e-06 22.1 0.0 1 1 4.7e-08 3.2e-06 21.0 0.0 27 68 250 293 227 310 0.83 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_53 - 398 FtsK_SpoIIIE PF01580.13 205 3.3e-06 21.0 0.0 1 1 1e-07 7e-06 19.9 0.0 41 65 159 183 138 190 0.89 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 FtsK_SpoIIIE PF01580.13 205 7.7e-06 19.8 0.0 1 1 2.2e-07 1.5e-05 18.9 0.0 41 62 176 197 162 202 0.89 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 5_12 - 273 MTS PF05175.9 170 0.0024 11.5 0.0 1 1 3.3e-05 0.0044 10.7 0.0 82 136 71 120 58 139 0.82 # 5571 # 6389 # 1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.623 1_23 - 1750 MTS PF05175.9 170 0.0025 11.5 0.0 1 1 3.8e-05 0.0052 10.5 0.0 54 108 303 357 292 371 0.86 # 19529 # 24778 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 3_27 - 358 VirE PF05272.6 198 0.001 12.9 0.0 1 1 6.3e-06 0.0017 12.1 0.0 48 74 169 195 161 204 0.90 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_23 - 1750 Helicase_C_4 PF13871.1 278 3.9e-44 145.4 5.3 1 1 2.2e-45 5.8e-43 141.5 5.3 1 270 1093 1337 1093 1344 0.91 # 19529 # 24778 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 3_27 - 358 MukB PF04310.7 227 0.0027 11.3 0.0 1 1 2.3e-05 0.0062 10.1 0.0 17 65 164 211 156 229 0.88 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_27 - 358 Dynamin_N PF00350.18 168 0.0019 12.3 0.0 1 1 1.1e-05 0.0029 11.7 0.0 1 29 176 202 176 233 0.87 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_27 - 358 ABC_tran PF00005.22 137 6.4e-06 20.8 0.0 1 1 2e-07 1.1e-05 20.1 0.0 8 48 170 210 166 234 0.86 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 2_18 - 885 ABC_tran PF00005.22 137 8.6e-06 20.4 2.0 1 2 8.1e-05 0.0044 11.6 0.1 14 77 285 351 273 449 0.62 # 16535 # 19189 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 2_18 - 885 ABC_tran PF00005.22 137 8.6e-06 20.4 2.0 2 2 0.0015 0.078 7.6 0.1 92 135 748 791 537 793 0.83 # 16535 # 19189 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589 1_53 - 398 ABC_tran PF00005.22 137 0.00014 16.5 0.0 1 1 7.6e-06 0.00041 15.0 0.0 13 80 158 270 152 340 0.52 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 1_64 - 323 ABC_tran PF00005.22 137 0.00056 14.5 0.1 1 1 1.5e-05 0.00079 14.1 0.1 13 52 115 166 104 234 0.71 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_61 - 540 ABC_tran PF00005.22 137 0.0013 13.4 0.0 1 1 5.2e-05 0.0028 12.3 0.0 15 38 267 290 262 347 0.82 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 3_27 - 358 TIGR03263 TIGR03263 180 0.0014 12.2 0.0 1 1 8.2e-06 0.0022 11.6 0.0 2 27 174 199 173 228 0.88 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 2_33 - 469 Eco57I PF07669.6 106 3.2e-18 60.4 0.0 1 1 4e-20 5.4e-18 59.7 0.0 3 104 242 348 238 350 0.94 # 29789 # 31195 # 1 # ID=2_33;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_4 - 597 Eco57I PF07669.6 106 4e-18 60.1 0.0 1 1 6e-20 8e-18 59.1 0.0 3 104 241 347 237 349 0.94 # 2072 # 3862 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.619 1_123 - 993 AAA_19 PF13245.1 76 5.3e-09 30.1 7.5 1 2 2.9e-09 1.3e-07 25.6 0.4 2 75 493 564 493 565 0.84 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_123 - 993 AAA_19 PF13245.1 76 5.3e-09 30.1 7.5 2 2 0.0016 0.07 7.3 0.0 30 63 682 719 676 734 0.73 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_64 - 323 AAA_19 PF13245.1 76 9.6e-06 19.6 1.1 1 1 7.4e-07 3.3e-05 17.9 0.4 2 36 106 139 105 153 0.83 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_61 - 540 AAA_19 PF13245.1 76 0.00027 15.0 0.0 1 1 8.7e-05 0.0039 11.3 0.0 9 39 262 292 254 301 0.78 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_53 - 398 AAA_19 PF13245.1 76 0.00037 14.6 0.0 1 1 4.5e-05 0.002 12.2 0.0 10 37 156 183 151 194 0.84 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 AAA_19 PF13245.1 76 0.0015 12.6 0.0 1 1 9.7e-05 0.0044 11.1 0.0 10 33 173 196 166 206 0.78 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 2_14 - 209 AAA_19 PF13245.1 76 0.0023 12.0 3.8 1 1 2.7e-05 0.0012 12.9 1.0 15 46 6 33 3 65 0.82 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 15_1 - 209 Ribosomal_S6 PF01250.12 92 0.002 12.3 3.1 1 5 0.023 3.1 2.1 0.0 8 41 31 64 30 71 0.81 # 1 # 627 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.636 15_1 - 209 Ribosomal_S6 PF01250.12 92 0.002 12.3 3.1 2 5 0.012 1.7 2.9 0.0 8 42 71 105 69 112 0.83 # 1 # 627 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.636 15_1 - 209 Ribosomal_S6 PF01250.12 92 0.002 12.3 3.1 3 5 0.021 2.9 2.2 0.1 8 41 111 144 109 152 0.79 # 1 # 627 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.636 15_1 - 209 Ribosomal_S6 PF01250.12 92 0.002 12.3 3.1 4 5 0.017 2.2 2.5 0.0 8 45 151 189 149 192 0.79 # 1 # 627 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.636 15_1 - 209 Ribosomal_S6 PF01250.12 92 0.002 12.3 3.1 5 5 0.04 5.5 1.3 0.0 8 46 171 209 169 209 0.90 # 1 # 627 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.636 3_1 - 219 Ribosomal_S6 PF01250.12 92 0.0056 10.9 4.2 1 6 0.025 3.3 2.0 0.0 8 41 31 64 30 72 0.79 # 2 # 658 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 3_1 - 219 Ribosomal_S6 PF01250.12 92 0.0056 10.9 4.2 2 6 0.018 2.4 2.4 0.0 8 45 71 109 69 112 0.79 # 2 # 658 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 3_1 - 219 Ribosomal_S6 PF01250.12 92 0.0056 10.9 4.2 3 6 0.041 5.5 1.3 0.0 8 46 111 149 110 151 0.90 # 2 # 658 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 3_1 - 219 Ribosomal_S6 PF01250.12 92 0.0056 10.9 4.2 4 6 0.014 1.9 2.8 0.1 8 46 131 169 127 171 0.91 # 2 # 658 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 3_1 - 219 Ribosomal_S6 PF01250.12 92 0.0056 10.9 4.2 5 6 0.015 2 2.7 0.1 8 46 151 189 149 191 0.91 # 2 # 658 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 3_1 - 219 Ribosomal_S6 PF01250.12 92 0.0056 10.9 4.2 6 6 0.045 6.1 1.1 0.0 8 42 171 205 170 214 0.81 # 2 # 658 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 1_32 - 1016 AAA_10 PF12846.2 304 1e-43 144.1 0.0 1 1 4.7e-45 1.6e-43 143.5 0.0 2 295 484 870 483 877 0.91 # 29987 # 33034 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 4_6 - 830 AAA_10 PF12846.2 304 4.2e-29 96.2 0.0 1 1 2.3e-30 7.7e-29 95.3 0.0 3 294 451 736 450 746 0.85 # 2653 # 5142 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.590 1_122 - 525 AAA_10 PF12846.2 304 7.7e-10 32.9 0.1 1 2 9.1e-09 3.1e-07 24.4 0.0 1 43 140 182 140 266 0.83 # 116311 # 117885 # 1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.613 1_122 - 525 AAA_10 PF12846.2 304 7.7e-10 32.9 0.1 2 2 0.0026 0.088 6.5 0.0 214 300 353 447 321 451 0.74 # 116311 # 117885 # 1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.613 1_89 - 844 AAA_10 PF12846.2 304 2.5e-08 28.0 0.1 1 1 2.2e-09 7.5e-08 26.4 0.1 2 289 128 485 127 493 0.67 # 80704 # 83235 # 1 # ID=1_89;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.621 1_61 - 540 AAA_10 PF12846.2 304 0.00016 15.5 0.0 1 1 9e-06 0.0003 14.5 0.0 4 36 266 302 264 311 0.76 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 3_27 - 358 AAA_10 PF12846.2 304 0.00022 15.0 0.0 1 1 9.9e-06 0.00034 14.4 0.0 4 33 176 204 174 213 0.73 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_64 - 323 AAA_10 PF12846.2 304 0.00024 14.9 0.1 1 1 1.6e-05 0.00053 13.8 0.0 4 34 116 146 113 156 0.78 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_53 - 398 AAA_10 PF12846.2 304 0.00034 14.4 0.0 1 1 1.9e-05 0.00065 13.5 0.0 4 24 159 179 157 187 0.85 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 1_23 - 1750 AAA_34 PF13872.1 303 1.1e-10 35.0 0.0 1 1 1e-12 2.8e-10 33.7 0.0 58 285 652 882 621 894 0.69 # 19529 # 24778 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_123 - 993 Viral_helicase1 PF01443.13 234 3.5e-12 40.6 0.5 1 2 4e-07 3.6e-05 17.7 0.1 3 151 507 662 505 703 0.73 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_123 - 993 Viral_helicase1 PF01443.13 234 3.5e-12 40.6 0.5 2 2 3.8e-08 3.4e-06 21.0 0.0 181 234 871 919 827 919 0.80 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_103 - 508 Viral_helicase1 PF01443.13 234 7.7e-06 19.8 0.3 1 3 0.072 6.5 0.5 0.0 5 22 28 45 26 81 0.67 # 95504 # 97027 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.597 1_103 - 508 Viral_helicase1 PF01443.13 234 7.7e-06 19.8 0.3 2 3 0.0012 0.11 6.3 0.0 52 117 187 249 158 315 0.75 # 95504 # 97027 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.597 1_103 - 508 Viral_helicase1 PF01443.13 234 7.7e-06 19.8 0.3 3 3 0.00027 0.025 8.4 0.1 174 230 407 480 374 482 0.72 # 95504 # 97027 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.597 1_61 - 540 Viral_helicase1 PF01443.13 234 0.0022 11.8 0.0 1 1 4.1e-05 0.0037 11.1 0.0 2 36 267 299 266 316 0.81 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_123 - 993 DUF2075 PF09848.4 352 0.00011 15.5 2.1 1 1 2.6e-06 0.00024 14.4 0.5 4 129 505 613 502 702 0.66 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 3_27 - 358 DUF2075 PF09848.4 352 0.00064 13.0 0.0 1 1 8.9e-06 0.0008 12.7 0.0 2 43 174 219 173 252 0.70 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_64 - 323 DUF2075 PF09848.4 352 0.003 10.8 0.0 1 1 4.1e-05 0.0037 10.5 0.0 3 25 115 137 113 205 0.84 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 3_27 - 358 PduV-EutP PF10662.4 143 0.0032 11.3 0.0 1 1 2e-05 0.0053 10.6 0.0 2 24 174 196 173 213 0.83 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_27 - 358 DEAD PF00270.24 169 0.00013 15.8 0.0 1 1 3.2e-06 0.00021 15.1 0.0 15 56 174 255 163 261 0.65 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_9 - 676 DEAD PF00270.24 169 0.00063 13.6 0.0 1 1 5e-05 0.0034 11.2 0.0 94 163 319 385 298 392 0.79 # 6960 # 8987 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_53 - 398 DEAD PF00270.24 169 0.0013 12.5 0.0 1 1 3.7e-05 0.0025 11.6 0.0 15 68 157 208 136 323 0.71 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 1_122 - 525 DEAD PF00270.24 169 0.002 12.0 0.0 1 1 4.8e-05 0.0032 11.3 0.0 8 50 134 174 132 301 0.88 # 116311 # 117885 # 1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.613 1_122 - 525 TrwB_AAD_bind PF10412.4 386 9.5e-127 417.0 0.0 1 1 2.1e-128 1.1e-126 416.8 0.0 2 386 127 510 126 510 0.97 # 116311 # 117885 # 1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.613 3_26 - 909 TrwB_AAD_bind PF10412.4 386 4.4e-17 56.0 0.0 1 2 0.056 3 0.6 0.0 93 127 220 252 161 316 0.74 # 20063 # 22789 # -1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 3_26 - 909 TrwB_AAD_bind PF10412.4 386 4.4e-17 56.0 0.0 2 2 7.8e-18 4.2e-16 52.8 0.0 164 377 388 606 379 615 0.77 # 20063 # 22789 # -1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 1_89 - 844 TrwB_AAD_bind PF10412.4 386 7.4e-05 15.8 0.3 1 2 0.00033 0.018 7.9 0.1 14 37 126 149 120 269 0.80 # 80704 # 83235 # 1 # ID=1_89;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.621 1_89 - 844 TrwB_AAD_bind PF10412.4 386 7.4e-05 15.8 0.3 2 2 0.0024 0.13 5.1 0.0 266 330 441 504 434 541 0.75 # 80704 # 83235 # 1 # ID=1_89;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.621 3_27 - 358 TrwB_AAD_bind PF10412.4 386 0.00012 15.1 0.0 1 1 3.4e-06 0.00019 14.4 0.0 18 56 176 214 168 224 0.82 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_61 - 540 TrwB_AAD_bind PF10412.4 386 0.0029 10.5 0.0 1 1 9e-05 0.0048 9.8 0.0 18 44 266 292 251 297 0.89 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_123 - 993 AAA_11 PF13086.1 236 6.5e-05 16.9 3.4 1 1 6.4e-06 0.00086 13.2 3.4 2 126 486 640 485 737 0.54 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_103 - 508 AAA_11 PF13086.1 236 0.00026 14.9 0.0 1 1 7.2e-06 0.00097 13.0 0.0 191 228 192 231 153 232 0.86 # 95504 # 97027 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.597 1_64 - 323 Sigma54_activ_2 PF14532.1 138 0.00015 16.2 0.1 1 2 2.6e-05 0.0035 11.7 0.0 15 45 107 137 98 148 0.84 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_64 - 323 Sigma54_activ_2 PF14532.1 138 0.00015 16.2 0.1 2 2 0.03 4.1 1.8 0.0 26 46 260 280 250 316 0.75 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 3_27 - 358 Sigma54_activ_2 PF14532.1 138 0.0008 13.8 0.0 1 1 1.6e-05 0.0021 12.4 0.0 14 54 166 206 163 219 0.86 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_26 - 909 T4SS-DNA_transf PF02534.9 469 2.4e-102 337.2 0.0 1 2 8.6e-41 1.2e-38 127.2 0.0 3 166 101 253 97 329 0.84 # 20063 # 22789 # -1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 3_26 - 909 T4SS-DNA_transf PF02534.9 469 2.4e-102 337.2 0.0 2 2 2.8e-65 3.8e-63 207.9 0.0 210 460 378 630 372 638 0.93 # 20063 # 22789 # -1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 1_122 - 525 T4SS-DNA_transf PF02534.9 469 8e-21 68.4 0.0 1 1 1.4e-22 1.8e-20 67.2 0.0 218 439 286 504 236 519 0.79 # 116311 # 117885 # 1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.613 3_27 - 358 Pox_A32 PF04665.7 241 3.6e-05 17.4 0.0 1 1 2.1e-07 5.6e-05 16.8 0.0 16 72 176 229 166 249 0.84 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_123 - 993 PIF1 PF05970.9 364 0.00061 13.1 0.7 1 2 5.3e-06 0.0014 11.8 0.1 2 81 486 557 485 618 0.65 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_123 - 993 PIF1 PF05970.9 364 0.00061 13.1 0.7 2 2 0.075 20 -1.8 0.0 250 305 682 737 636 747 0.72 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 2_14 - 209 Gtr1_RagA PF04670.7 232 0.0034 10.8 0.0 1 1 1.9e-05 0.005 10.3 0.0 93 131 116 154 104 175 0.84 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 1_53 - 398 RNA_helicase PF00910.17 107 0.00015 16.2 0.0 1 1 2.3e-06 0.00031 15.2 0.0 1 30 159 186 159 209 0.77 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 RNA_helicase PF00910.17 107 0.00034 15.1 0.0 1 1 4e-06 0.00054 14.5 0.0 1 24 176 199 176 227 0.85 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_27 - 358 UPF0079 PF02367.12 123 3.8e-06 20.9 0.0 1 1 4.7e-08 6.4e-06 20.1 0.0 10 42 168 200 161 207 0.84 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_64 - 323 UPF0079 PF02367.12 123 0.0021 12.0 0.1 1 1 2.8e-05 0.0038 11.2 0.1 8 36 106 134 100 145 0.75 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 5_5 - 63 S1 PF00575.18 74 0.00068 14.1 0.1 1 1 5.4e-06 0.00073 14.0 0.1 3 41 13 56 11 62 0.84 # 2567 # 2755 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 5_8 - 100 S1 PF00575.18 74 0.00084 13.8 0.1 1 1 8.3e-06 0.0011 13.4 0.1 41 69 61 89 20 92 0.87 # 4002 # 4301 # -1 # ID=5_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.590 5_9 - 118 tRNA_anti-codon PF01336.20 75 0.00026 15.2 0.0 1 1 1.4e-06 0.00038 14.6 0.0 30 71 55 102 42 106 0.80 # 4491 # 4844 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.607 2_14 - 209 AAA_24 PF13479.1 213 1.8e-05 18.7 0.0 1 1 1e-07 2.8e-05 18.1 0.0 7 77 5 87 2 90 0.77 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 1_103 - 508 UvrD-helicase PF00580.16 315 9.8e-17 55.4 0.3 1 2 0.0018 0.25 4.8 0.0 2 31 10 39 9 49 0.92 # 95504 # 97027 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.597 1_103 - 508 UvrD-helicase PF00580.16 315 9.8e-17 55.4 0.3 2 2 1.1e-16 1.5e-14 48.3 0.2 255 306 195 243 186 251 0.87 # 95504 # 97027 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.597 1_64 - 323 UvrD-helicase PF00580.16 315 0.0042 10.7 1.4 1 2 0.00014 0.019 8.5 1.0 7 41 106 141 101 145 0.83 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 1_64 - 323 UvrD-helicase PF00580.16 315 0.0042 10.7 1.4 2 2 0.06 8.1 -0.1 0.0 61 99 185 222 183 244 0.73 # 61759 # 62727 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.621 3_27 - 358 NACHT PF05729.7 166 5.7e-06 20.4 0.0 1 1 1.2e-07 1.1e-05 19.5 0.0 2 27 175 200 174 204 0.90 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_53 - 398 NACHT PF05729.7 166 4.2e-05 17.5 0.0 1 1 9.5e-07 8.5e-05 16.6 0.0 3 32 159 188 157 203 0.88 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 4_6 - 830 NACHT PF05729.7 166 0.0021 12.1 0.1 1 1 6.2e-05 0.0056 10.6 0.1 5 41 454 489 452 508 0.80 # 2653 # 5142 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.590 1_96 - 462 AAA_25 PF13481.1 194 4.3e-16 53.2 0.1 1 1 1e-17 7.1e-16 52.5 0.1 9 190 194 377 187 381 0.84 # 87520 # 88905 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.608 1_53 - 398 AAA_25 PF13481.1 194 5e-05 17.1 0.0 1 1 1.5e-06 0.0001 16.1 0.0 27 60 150 183 142 243 0.86 # 50824 # 52017 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.626 3_27 - 358 AAA_25 PF13481.1 194 8e-05 16.4 0.0 1 1 2.5e-06 0.00017 15.4 0.0 30 63 170 203 161 234 0.76 # 22992 # 24065 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 2_14 - 209 AAA_25 PF13481.1 194 0.00015 15.5 0.1 1 1 4.1e-06 0.00028 14.6 0.1 36 78 4 35 2 85 0.82 # 13264 # 13890 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668 1_9 - 676 SNF2_N PF00176.18 299 4.6e-20 65.9 0.0 1 1 2.9e-22 7.8e-20 65.1 0.0 26 267 255 473 251 504 0.83 # 6960 # 8987 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 15_1 - 209 AAA_28 PF13521.1 163 0.00031 15.0 8.1 1 4 0.001 0.14 6.5 0.2 10 62 36 87 33 95 0.71 # 1 # 627 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.636 15_1 - 209 AAA_28 PF13521.1 163 0.00031 15.0 8.1 2 4 0.003 0.4 4.9 0.3 10 52 76 117 74 132 0.70 # 1 # 627 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.636 15_1 - 209 AAA_28 PF13521.1 163 0.00031 15.0 8.1 3 4 0.0026 0.36 5.1 0.2 10 57 96 142 93 153 0.72 # 1 # 627 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.636 15_1 - 209 AAA_28 PF13521.1 163 0.00031 15.0 8.1 4 4 0.00094 0.13 6.5 0.2 10 49 156 195 153 208 0.85 # 1 # 627 # -1 # ID=15_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.636 3_1 - 219 AAA_28 PF13521.1 163 0.0013 13.0 9.8 1 4 0.016 2.1 2.6 0.1 10 46 36 72 33 76 0.83 # 2 # 658 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 3_1 - 219 AAA_28 PF13521.1 163 0.0013 13.0 9.8 2 4 0.00064 0.086 7.1 0.2 10 54 76 119 73 134 0.81 # 2 # 658 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 3_1 - 219 AAA_28 PF13521.1 163 0.0013 13.0 9.8 3 4 0.011 1.5 3.0 0.3 27 49 133 155 114 170 0.49 # 2 # 658 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 3_1 - 219 AAA_28 PF13521.1 163 0.0013 13.0 9.8 4 4 0.0011 0.15 6.3 1.1 10 49 156 195 134 215 0.60 # 2 # 658 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.623 1_123 - 993 Herpes_Helicase PF02689.9 819 5.9e-05 15.2 0.0 1 2 0.075 10 -2.1 0.0 179 210 558 589 544 595 0.65 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_123 - 993 Herpes_Helicase PF02689.9 819 5.9e-05 15.2 0.0 2 2 1.5e-06 0.0002 13.5 0.0 741 785 872 917 856 923 0.84 # 117899 # 120877 # 1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646 1_61 - 540 Herpes_Helicase PF02689.9 819 0.0001 14.4 0.0 1 1 1.4e-06 0.00018 13.6 0.0 48 84 251 287 224 288 0.76 # 58461 # 60080 # 1 # ID=1_61;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/a1a88eff-b6ea-4efb-8437-f9cca73c2ec3 # Target file: checkm_output/bins/pGCA_002218245.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002218245.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a1a88eff-b6ea-4efb-8437-f9cca73c2ec3 checkm_output/bins/pGCA_002218245.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:49:22 2020 # [ok]