# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_36 - 272 YhjQ PF06564.7 244 0.00095 11.6 0.1 1 2 0.0047 0.54 2.6 0.1 3 38 4 39 2 47 0.91 # 33802 # 34617 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.312 1_36 - 272 YhjQ PF06564.7 244 0.00095 11.6 0.1 2 2 0.00034 0.039 6.4 0.0 104 149 125 170 92 179 0.76 # 33802 # 34617 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.312 1_14 - 389 DUF87 PF01935.12 229 1.1e-06 21.7 0.3 1 1 8.2e-08 2.4e-06 20.6 0.2 17 49 138 170 124 179 0.80 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_46 - 1019 DUF87 PF01935.12 229 4e-06 19.9 7.3 1 3 0.00049 0.014 8.2 0.0 26 50 410 438 384 459 0.75 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_46 - 1019 DUF87 PF01935.12 229 4e-06 19.9 7.3 2 3 0.00058 0.017 8.0 0.0 152 228 576 650 498 651 0.80 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_46 - 1019 DUF87 PF01935.12 229 4e-06 19.9 7.3 3 3 0.042 1.2 2.0 4.8 113 210 866 958 805 973 0.60 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_52 - 863 DUF87 PF01935.12 229 0.00037 13.4 0.0 1 1 3.6e-05 0.001 12.0 0.0 26 63 496 532 488 656 0.83 # 46272 # 48860 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.362 1_37 - 477 DUF87 PF01935.12 229 0.0009 12.2 1.4 1 1 0.00017 0.0048 9.8 0.1 25 44 238 257 235 269 0.89 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_74 - 271 AAA_22 PF13401.1 131 2.3e-27 88.8 0.2 1 1 2.4e-28 5.5e-27 87.6 0.1 2 131 25 170 24 170 0.91 # 64725 # 65537 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.337 1_14 - 389 AAA_22 PF13401.1 131 7.4e-06 19.3 0.1 1 1 9.1e-07 2.1e-05 17.8 0.1 6 114 146 278 141 294 0.58 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_46 - 1019 AAA_22 PF13401.1 131 3.4e-05 17.1 0.1 1 1 2.8e-05 0.00064 13.0 0.0 4 39 407 432 404 534 0.85 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_37 - 477 AAA_22 PF13401.1 131 9.9e-05 15.6 0.0 1 1 1.1e-05 0.00026 14.2 0.0 7 43 239 269 233 324 0.72 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_52 - 863 AAA_22 PF13401.1 131 0.001 12.3 0.6 1 1 0.00066 0.015 8.5 0.1 5 125 494 663 489 669 0.71 # 46272 # 48860 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.362 1_49 - 313 XS PF03468.9 116 0.00017 14.7 0.8 1 1 3.5e-06 0.00041 13.4 0.1 18 81 198 260 187 285 0.81 # 44444 # 45382 # 1 # ID=1_49;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.373 1_37 - 477 AAA_17 PF13207.1 121 5.7e-06 20.3 0.6 1 1 2.7e-07 1.5e-05 18.9 0.1 1 66 238 317 238 396 0.72 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_46 - 1019 AAA_17 PF13207.1 121 0.016 9.1 7.7 1 1 3.8e-05 0.0022 11.9 0.1 3 24 411 433 411 512 0.71 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_37 - 477 Miro PF08477.8 119 9e-05 16.1 0.1 1 1 2e-06 0.00024 14.7 0.1 1 63 238 298 238 361 0.72 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_2 - 372 ADH_zinc_N PF00107.21 130 4.1e-26 84.2 0.1 1 1 6.1e-28 7e-26 83.4 0.1 1 127 197 329 197 332 0.89 # 1277 # 2392 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.393 1_37 - 477 T2SE PF00437.15 272 2.2e-38 124.7 0.0 1 1 5.7e-40 3.3e-38 124.2 0.0 5 259 112 378 108 387 0.91 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_14 - 389 T2SE PF00437.15 272 0.00068 11.6 0.0 1 1 2.2e-05 0.0013 10.7 0.0 130 152 146 168 136 177 0.86 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_14 - 389 AAA_16 PF13191.1 185 0.0001 15.4 0.0 1 1 1.8e-06 0.0002 14.5 0.0 21 47 141 167 133 187 0.87 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_37 - 477 AAA_18 PF13238.1 129 0.00019 14.8 2.7 1 2 3.6e-06 0.00042 13.8 0.1 1 39 239 281 239 328 0.60 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_37 - 477 AAA_18 PF13238.1 129 0.00019 14.8 2.7 2 2 0.092 11 -0.5 0.2 103 115 446 458 388 468 0.74 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_37 - 477 KaiC PF06745.8 227 0.00033 12.9 0.1 1 1 1.2e-05 0.0014 10.8 0.0 18 48 235 264 224 322 0.71 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_14 - 389 AAA_29 PF13555.1 62 0.00011 14.8 0.1 1 1 3.7e-06 0.00021 13.9 0.1 25 40 146 161 131 171 0.79 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_46 - 1019 AAA_29 PF13555.1 62 0.00059 12.5 0.1 1 1 2.3e-05 0.0013 11.4 0.1 24 39 408 423 395 432 0.81 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_74 - 271 AAA PF00004.24 132 2.4e-05 17.7 0.6 1 1 1.6e-06 9.4e-05 15.7 0.6 3 98 32 156 31 192 0.61 # 64725 # 65537 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.337 1_37 - 477 AAA PF00004.24 132 0.00013 15.3 0.0 1 1 5e-06 0.00029 14.2 0.0 1 67 239 324 239 340 0.75 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_37 - 477 Sigma54_activat PF00158.21 168 5.5e-06 19.0 0.0 1 1 7.8e-08 8.9e-06 18.4 0.0 8 54 222 268 215 283 0.79 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_52 - 863 DUF258 PF03193.11 161 0.0008 11.7 0.0 1 1 1.5e-05 0.0017 10.7 0.0 22 56 480 514 463 522 0.84 # 46272 # 48860 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.362 1_46 - 1019 TraG-D_C PF12696.2 128 4.1e-06 19.8 0.0 1 2 2.6e-07 3e-05 17.0 0.0 4 45 667 708 665 732 0.83 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_46 - 1019 TraG-D_C PF12696.2 128 4.1e-06 19.8 0.0 2 2 0.066 7.6 -0.5 0.0 28 58 822 852 814 912 0.82 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_36 - 272 AAA_31 PF13614.1 157 1.4e-22 73.4 0.0 1 1 2e-24 2.3e-22 72.7 0.0 1 152 3 172 3 177 0.94 # 33802 # 34617 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.312 1_74 - 271 AAA_30 PF13604.1 196 2.6e-05 17.0 0.0 1 1 3.9e-07 4.5e-05 16.2 0.0 22 128 31 162 19 163 0.76 # 64725 # 65537 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.337 1_52 - 863 GBP PF02263.14 260 0.00022 13.4 0.0 1 1 4.7e-06 0.00054 12.1 0.0 9 43 482 515 478 565 0.74 # 46272 # 48860 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.362 1_14 - 389 FtsK_SpoIIIE PF01580.13 205 7e-29 93.8 0.0 1 1 1.8e-30 1e-28 93.3 0.0 17 204 121 291 117 292 0.94 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_37 - 477 FtsK_SpoIIIE PF01580.13 205 0.00019 14.0 0.0 1 1 7.3e-06 0.00042 12.9 0.0 35 59 233 257 203 259 0.79 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_37 - 477 ABC_tran PF00005.22 137 4.1e-05 17.0 0.0 1 1 1.3e-06 7.7e-05 16.1 0.0 9 65 234 293 231 399 0.75 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_14 - 389 ABC_tran PF00005.22 137 0.0002 14.8 0.0 1 1 6.6e-06 0.00038 13.9 0.0 14 96 147 233 142 260 0.66 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_69 - 145 TIGR03263 TIGR03263 180 0.00083 11.8 0.0 1 1 9e-06 0.001 11.5 0.0 54 109 26 81 22 88 0.88 # 61406 # 61840 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.389 1_46 - 1019 AAA_19 PF13245.1 76 0.00071 12.5 0.0 1 1 1.4e-05 0.0016 11.3 0.0 14 35 411 432 405 466 0.85 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_46 - 1019 Helicase_RecD PF05127.9 177 0.024 7.4 0.0 1 2 0.024 2.8 0.6 0.0 2 22 412 432 411 448 0.86 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_46 - 1019 Helicase_RecD PF05127.9 177 0.024 7.4 0.0 2 2 0.00021 0.024 7.4 0.0 76 113 649 686 631 692 0.79 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_52 - 863 AAA_10 PF12846.2 304 2.3e-34 112.3 0.0 1 1 1e-35 3.9e-34 111.5 0.0 3 303 495 804 493 805 0.81 # 46272 # 48860 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.362 1_46 - 1019 AAA_10 PF12846.2 304 3.5e-16 52.5 1.5 1 1 1.2e-17 4.6e-16 52.2 0.0 5 300 411 738 408 740 0.74 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_14 - 389 AAA_10 PF12846.2 304 1.6e-08 27.4 0.3 1 2 5.6e-05 0.0022 10.5 0.1 2 24 145 167 144 187 0.87 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_14 - 389 AAA_10 PF12846.2 304 1.6e-08 27.4 0.3 2 2 2.5e-06 9.5e-05 15.0 0.0 199 264 210 291 194 314 0.78 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_37 - 477 ResIII PF04851.10 184 0.00038 13.4 0.1 1 1 6.9e-06 0.00079 12.4 0.1 11 43 200 254 197 281 0.80 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_2 - 372 FtsJ PF01728.14 181 0.00036 13.6 0.0 1 1 5.6e-06 0.00064 12.8 0.0 40 134 205 362 177 370 0.87 # 1277 # 2392 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.393 1_14 - 389 Viral_helicase1 PF01443.13 234 0.00064 12.3 0.0 1 2 3.5e-05 0.004 9.8 0.0 2 66 148 211 147 212 0.84 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_14 - 389 Viral_helicase1 PF01443.13 234 0.00064 12.3 0.0 2 2 0.033 3.8 0.0 0.0 61 77 227 243 215 259 0.79 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_74 - 271 DUF2075 PF09848.4 352 0.00042 12.4 0.0 1 1 5.2e-06 0.0006 11.9 0.0 5 126 31 162 27 165 0.69 # 64725 # 65537 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.337 1_14 - 389 DUF815 PF05673.8 250 2.4e-05 16.5 0.0 1 1 3.7e-07 4.2e-05 15.6 0.0 48 79 139 170 133 206 0.80 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_46 - 1019 TrwB_AAD_bind PF10412.4 386 3.8e-05 15.5 0.2 1 2 0.00032 0.012 7.3 0.1 7 39 399 431 396 434 0.82 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_46 - 1019 TrwB_AAD_bind PF10412.4 386 3.8e-05 15.5 0.2 2 2 0.00082 0.032 5.9 0.0 226 287 643 707 602 733 0.73 # 40292 # 43348 # 1 # ID=1_46;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.379 1_14 - 389 TrwB_AAD_bind PF10412.4 386 0.00014 13.6 0.0 1 2 7.8e-05 0.003 9.2 0.0 13 38 142 167 135 171 0.87 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_14 - 389 TrwB_AAD_bind PF10412.4 386 0.00014 13.6 0.0 2 2 0.015 0.56 1.8 0.0 245 281 249 289 234 292 0.80 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_52 - 863 TrwB_AAD_bind PF10412.4 386 0.0006 11.6 0.0 1 1 3.4e-05 0.0013 10.4 0.0 11 54 489 532 482 537 0.90 # 46272 # 48860 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.362 1_37 - 477 Sigma54_activ_2 PF14532.1 138 2.5e-07 23.9 0.0 1 1 4.1e-09 4.7e-07 23.0 0.0 15 113 230 328 216 339 0.84 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_14 - 389 Pox_A32 PF04665.7 241 0.00028 13.3 0.2 1 1 6e-06 0.00069 12.0 0.1 16 89 147 224 137 289 0.85 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_14 - 389 Gtr1_RagA PF04670.7 232 0.00033 12.9 0.0 1 1 5.3e-06 0.00061 12.0 0.0 2 43 147 190 146 226 0.78 # 10816 # 11982 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_37 - 477 RNA_helicase PF00910.17 107 0.0001 15.6 0.0 1 1 2.5e-06 0.00029 14.1 0.0 1 68 239 317 239 324 0.68 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_37 - 477 UPF0079 PF02367.12 123 0.00067 12.4 0.3 1 1 1.3e-05 0.0015 11.3 0.0 8 42 229 263 223 280 0.82 # 34647 # 36077 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.345 1_2 - 372 TrkA_N PF02254.13 116 0.00021 14.4 0.0 1 1 7.6e-06 0.00044 13.4 0.0 2 42 191 233 190 245 0.83 # 1277 # 2392 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.393 1_25 - 196 TrkA_N PF02254.13 116 0.00047 13.3 0.3 1 2 6.7e-05 0.0039 10.3 0.2 34 107 20 99 4 109 0.78 # 24709 # 25296 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.296 1_25 - 196 TrkA_N PF02254.13 116 0.00047 13.3 0.3 2 2 0.055 3.2 0.9 0.0 9 43 134 167 131 179 0.83 # 24709 # 25296 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.296 1_74 - 271 DUF1253 PF06862.7 442 2.8e-05 15.7 0.2 1 1 4.4e-07 5.1e-05 14.9 0.2 145 186 111 152 98 157 0.85 # 64725 # 65537 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.337 1_71 - 117 H2TH PF06831.9 93 0.0006 12.7 0.0 1 1 6.4e-06 0.00073 12.4 0.0 11 55 24 67 15 102 0.73 # 63290 # 63640 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.359 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/bcd74376-ce1a-4681-aa00-551c897a1a71 # Target file: checkm_output/bins/pGCA_002216125.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002216125.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/bcd74376-ce1a-4681-aa00-551c897a1a71 checkm_output/bins/pGCA_002216125.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:49:20 2020 # [ok]