# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_40 - 104 adh_short PF00106.20 167 2e-15 48.8 0.0 1 1 5.3e-17 2.3e-15 48.6 0.0 67 156 1 96 1 101 0.94 # 21385 # 21696 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.516 1_1 - 103 ABC_tran PF00005.22 137 9.7e-05 14.4 0.0 1 1 3.9e-06 0.00017 13.7 0.0 107 136 7 36 1 37 0.88 # 3 # 311 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.511 1_40 - 104 adh_short_C2 PF13561.1 241 1.8e-05 16.3 0.1 1 1 4.3e-07 1.9e-05 16.2 0.1 74 154 15 95 1 101 0.83 # 21385 # 21696 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.516 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/678d4b8f-a10e-45f2-a1cc-ac01260cfeed # Target file: checkm_output/bins/pGCA_002201975.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002201975.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/678d4b8f-a10e-45f2-a1cc-ac01260cfeed checkm_output/bins/pGCA_002201975.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:49:02 2020 # [ok]