# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_12 - 215 Methyltransf_12 PF08242.7 99 4.4e-12 40.8 0.2 1 1 4e-14 1.1e-11 39.5 0.0 1 99 50 140 50 140 0.86 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 2_12 - 215 RrnaAD PF00398.15 262 1.2e-06 22.1 0.0 1 1 6.1e-09 1.7e-06 21.6 0.0 19 134 34 144 21 150 0.86 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 14_1 - 239 IstB_IS21 PF01695.12 178 4.3e-71 232.3 0.1 1 1 8.6e-73 6.1e-71 231.9 0.1 2 178 54 230 53 230 0.99 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 5_13 - 260 IstB_IS21 PF01695.12 178 8.8e-53 172.7 0.1 1 1 1.9e-54 1.4e-52 172.1 0.1 6 178 64 236 59 236 0.98 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 16_2 - 51 IstB_IS21 PF01695.12 178 2.7e-10 34.3 0.2 1 1 4.5e-12 3.1e-10 34.1 0.2 147 178 1 32 1 32 0.96 # 417 # 569 # -1 # ID=16_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.366 6_20 - 51 IstB_IS21 PF01695.12 178 2.7e-10 34.3 0.2 1 1 4.5e-12 3.1e-10 34.1 0.2 147 178 1 32 1 32 0.96 # 17372 # 17524 # -1 # ID=6_20;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.373 1_104 - 274 MipZ PF09140.6 261 6.3e-12 39.4 0.2 1 2 1.9e-09 5.3e-07 23.3 0.0 2 54 4 55 3 83 0.77 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_104 - 274 MipZ PF09140.6 261 6.3e-12 39.4 0.2 2 2 1.3e-06 0.00037 14.0 0.0 78 126 107 155 88 160 0.85 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_104 - 274 YhjQ PF06564.7 244 1.9e-16 54.5 0.0 1 1 9.8e-19 2.8e-16 54.0 0.0 8 151 9 161 2 177 0.81 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 2_12 - 215 Methyltransf_18 PF12847.2 112 8.1e-11 36.9 0.0 1 1 9.8e-13 2.8e-10 35.2 0.0 2 110 46 143 45 145 0.90 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 1_37 - 879 DUF2110 PF09883.4 225 0.0009 13.2 0.2 1 2 3.9e-05 0.011 9.7 0.1 19 99 105 183 101 192 0.91 # 26027 # 28663 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.336 1_37 - 879 DUF2110 PF09883.4 225 0.0009 13.2 0.2 2 2 0.028 8 0.3 0.0 153 186 639 672 613 692 0.79 # 26027 # 28663 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.336 1_46 - 644 DUF87 PF01935.12 229 0.00072 13.8 2.1 1 2 0.092 26 -1.1 0.2 153 184 87 114 60 140 0.46 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 1_46 - 644 DUF87 PF01935.12 229 0.00072 13.8 2.1 2 2 6.4e-06 0.0018 12.5 0.2 28 81 252 301 251 470 0.83 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 3_10 - 227 NB-ARC PF00931.17 287 0.0012 12.0 0.0 1 1 6.7e-06 0.0019 11.4 0.0 17 39 29 51 20 70 0.83 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 2_12 - 215 MetW PF07021.7 193 1.6e-05 18.7 0.0 1 1 1.2e-07 3.5e-05 17.6 0.0 3 96 35 124 33 135 0.72 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 14_1 - 239 AAA_22 PF13401.1 131 6.3e-06 20.8 2.4 1 1 1.3e-05 0.00076 14.0 0.5 5 100 100 173 96 204 0.63 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 3_10 - 227 AAA_22 PF13401.1 131 0.00014 16.4 0.2 1 1 1.3e-05 0.00072 14.1 0.2 3 22 30 49 28 206 0.90 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 1_29 - 443 AAA_22 PF13401.1 131 0.00044 14.8 0.0 1 1 2.1e-05 0.0012 13.4 0.0 4 27 211 234 207 312 0.73 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 5_13 - 260 AAA_22 PF13401.1 131 0.00049 14.6 0.3 1 2 0.0028 0.16 6.5 0.1 4 19 105 120 102 123 0.85 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 5_13 - 260 AAA_22 PF13401.1 131 0.00049 14.6 0.3 2 2 0.0063 0.35 5.4 0.0 71 116 147 200 136 208 0.74 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 1_46 - 644 AAA_22 PF13401.1 131 0.0023 12.5 0.5 1 1 0.00013 0.0075 10.8 0.0 6 28 249 271 244 292 0.90 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 2_12 - 215 Methyltransf_PK PF05891.7 218 1.1e-05 19.2 0.1 1 1 6.2e-08 1.7e-05 18.5 0.1 57 168 47 151 33 186 0.76 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 1_104 - 274 ATP_bind_1 PF03029.12 238 8.2e-06 19.8 3.4 1 1 3.8e-07 0.00011 16.2 3.4 6 163 13 191 8 268 0.69 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 2_12 - 215 Methyltransf_11 PF08241.7 95 5.8e-10 34.0 0.0 1 1 3.7e-12 1e-09 33.1 0.0 1 95 50 142 50 142 0.93 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 3_6 - 239 MutS_V PF00488.16 235 0.0011 12.7 0.0 1 2 1.4e-05 0.0038 11.0 0.0 23 64 10 50 6 56 0.81 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_6 - 239 MutS_V PF00488.16 235 0.0011 12.7 0.0 2 2 0.095 27 -1.6 0.0 157 172 185 200 173 225 0.77 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 1_104 - 274 SRP54 PF00448.17 196 8.3e-06 19.7 0.7 1 2 3.9e-07 0.00011 16.1 0.2 11 47 13 48 6 82 0.80 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_104 - 274 SRP54 PF00448.17 196 8.3e-06 19.7 0.7 2 2 0.015 4.1 1.1 0.0 68 90 112 134 92 145 0.66 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 3_6 - 239 AAA_15 PF13175.1 415 7.5e-09 29.4 0.5 1 2 2.8e-05 0.0079 9.6 0.3 12 42 19 49 4 78 0.75 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_6 - 239 AAA_15 PF13175.1 415 7.5e-09 29.4 0.5 2 2 6.7e-08 1.9e-05 18.2 0.0 372 413 155 195 132 197 0.89 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 14_1 - 239 AAA_17 PF13207.1 121 0.00021 16.5 0.4 1 1 8.5e-06 0.00048 15.3 0.4 2 64 102 172 101 227 0.61 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 3_10 - 227 AAA_17 PF13207.1 121 0.00039 15.6 0.2 1 1 1.1e-05 0.00063 15.0 0.2 2 19 34 51 33 128 0.85 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_6 - 239 AAA_17 PF13207.1 121 0.0012 14.1 0.3 1 1 3.5e-05 0.002 13.3 0.3 1 47 31 73 31 228 0.79 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 1_29 - 443 AAA_17 PF13207.1 121 0.0017 13.6 0.3 1 1 0.00044 0.025 9.8 0.0 2 19 214 231 213 329 0.83 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_46 - 644 AAA_17 PF13207.1 121 0.0034 12.6 0.7 1 1 0.0003 0.017 10.3 0.0 3 21 251 269 251 305 0.83 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 3_6 - 239 AAA_21 PF13304.1 303 5.5e-19 63.5 0.1 1 1 2.6e-19 2.5e-17 58.1 0.1 3 297 33 192 31 197 0.85 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_10 - 227 AAA_21 PF13304.1 303 2.9e-13 44.7 0.0 1 2 3.9e-07 3.7e-05 18.2 0.0 3 25 35 64 33 113 0.71 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_10 - 227 AAA_21 PF13304.1 303 2.9e-13 44.7 0.0 2 2 4e-09 3.7e-07 24.7 0.0 234 299 139 201 127 205 0.91 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 14_1 - 239 AAA_21 PF13304.1 303 0.00011 16.6 0.8 1 2 0.067 6.3 1.0 0.1 99 154 49 104 26 105 0.74 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 14_1 - 239 AAA_21 PF13304.1 303 0.00011 16.6 0.8 2 2 2.9e-06 0.00028 15.3 0.1 3 107 103 218 101 228 0.90 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 1_46 - 644 Miro PF08477.8 119 0.00066 14.6 0.7 1 1 1.3e-05 0.0018 13.1 0.1 3 49 251 297 250 314 0.75 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 3_6 - 239 Miro PF08477.8 119 0.0014 13.5 0.0 1 1 3.5e-05 0.0049 11.7 0.0 4 25 34 55 32 149 0.76 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_10 - 227 MobB PF03205.9 140 0.0015 12.7 0.1 1 1 4.6e-05 0.0066 10.5 0.0 3 19 34 50 32 54 0.89 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 1_46 - 644 MobB PF03205.9 140 0.0032 11.6 0.5 1 2 0.00081 0.11 6.5 0.1 5 27 252 274 250 278 0.86 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 1_46 - 644 MobB PF03205.9 140 0.0032 11.6 0.5 2 2 0.014 2 2.5 0.1 67 102 407 440 401 463 0.82 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 1_104 - 274 ArsA_ATPase PF02374.10 305 4.6e-11 36.6 2.9 1 2 1.9e-13 5.4e-11 36.4 0.5 9 82 11 83 2 140 0.59 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_104 - 274 ArsA_ATPase PF02374.10 305 4.6e-11 36.6 2.9 2 2 0.075 21 -1.7 0.1 270 282 208 220 194 268 0.56 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 14_1 - 239 PhoH PF02562.11 205 2.3e-06 21.3 0.0 1 1 3.5e-08 5e-06 20.2 0.0 13 61 93 141 80 171 0.80 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 5_13 - 260 PhoH PF02562.11 205 2.3e-06 21.3 0.0 1 1 2.5e-08 3.5e-06 20.7 0.0 12 47 98 133 86 189 0.86 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 14_1 - 239 AFG1_ATPase PF03969.11 362 4.8e-06 19.9 0.1 1 1 2.1e-08 5.9e-06 19.6 0.1 5 169 44 203 40 239 0.67 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 1_29 - 443 T2SE PF00437.15 272 1.9e-34 113.2 0.0 1 1 2e-36 2.8e-34 112.6 0.0 12 260 96 347 86 358 0.83 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 5_13 - 260 T2SE PF00437.15 272 0.00098 12.4 0.1 1 1 1.4e-05 0.002 11.4 0.1 96 144 74 121 29 131 0.85 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 1_46 - 644 Zeta_toxin PF06414.7 201 0.0024 11.3 1.9 1 3 0.083 24 -1.7 0.0 134 184 91 135 85 151 0.76 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 1_46 - 644 Zeta_toxin PF06414.7 201 0.0024 11.3 1.9 2 3 0.0059 1.7 2.1 0.1 97 133 141 178 123 186 0.88 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 1_46 - 644 Zeta_toxin PF06414.7 201 0.0024 11.3 1.9 3 3 0.00012 0.034 7.6 0.1 20 56 251 287 242 297 0.82 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 2_12 - 215 CheR PF01739.13 196 0.00037 14.2 0.1 1 1 2.4e-06 0.00069 13.3 0.1 131 180 99 149 90 167 0.76 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 3_10 - 227 SMC_N PF02463.14 220 2.1e-08 28.0 0.4 1 2 2.8e-05 0.004 10.7 0.3 24 44 31 51 24 55 0.85 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_10 - 227 SMC_N PF02463.14 220 2.1e-08 28.0 0.4 2 2 9.9e-07 0.00014 15.5 0.0 135 205 134 207 53 219 0.70 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_6 - 239 SMC_N PF02463.14 220 0.0018 11.9 0.1 1 2 6.3e-05 0.0089 9.6 0.1 24 44 29 49 5 58 0.76 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_6 - 239 SMC_N PF02463.14 220 0.0018 11.9 0.1 2 2 0.063 8.9 -0.2 0.0 161 198 155 193 119 211 0.73 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 1_104 - 274 VirC1 PF07015.6 231 4e-06 20.4 0.2 1 2 3.7e-07 0.0001 15.8 0.1 2 42 3 43 2 82 0.81 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_104 - 274 VirC1 PF07015.6 231 4e-06 20.4 0.2 2 2 0.0034 0.97 2.8 0.0 84 138 128 161 90 202 0.70 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_104 - 274 Fer4_NifH PF00142.13 273 4.2e-09 30.3 0.9 1 2 4.3e-10 1.2e-07 25.5 0.1 8 52 11 55 4 75 0.91 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_104 - 274 Fer4_NifH PF00142.13 273 4.2e-09 30.3 0.9 2 2 0.0027 0.76 3.2 0.1 152 201 208 260 171 269 0.66 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 14_1 - 239 AAA_16 PF13191.1 185 5.3e-05 17.6 0.1 1 1 2e-06 0.00019 15.8 0.1 25 63 100 138 83 158 0.79 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 3_10 - 227 AAA_16 PF13191.1 185 0.00011 16.6 0.0 1 1 2.3e-06 0.00022 15.6 0.0 20 44 27 50 20 78 0.81 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 1_29 - 443 AAA_16 PF13191.1 185 0.00061 14.2 0.0 1 1 1.7e-05 0.0016 12.8 0.0 24 49 211 236 202 292 0.90 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 3_6 - 239 AAA_23 PF13476.1 202 3.4e-05 18.6 0.1 1 1 7.9e-07 7.4e-05 17.5 0.1 11 40 20 50 13 63 0.82 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 1_29 - 443 AAA_23 PF13476.1 202 0.00038 15.2 2.6 1 2 0.038 3.5 2.2 0.8 153 192 21 59 4 137 0.72 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_29 - 443 AAA_23 PF13476.1 202 0.00038 15.2 2.6 2 2 4e-06 0.00038 15.2 2.6 5 46 190 239 187 283 0.84 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 3_10 - 227 AAA_23 PF13476.1 202 0.0023 12.6 0.2 1 1 4.3e-05 0.004 11.8 0.2 22 39 34 51 21 54 0.83 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 1_29 - 443 AAA_18 PF13238.1 129 4e-05 18.3 0.7 1 1 1.6e-05 0.0012 13.6 0.0 1 42 214 268 214 321 0.72 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_46 - 644 AAA_18 PF13238.1 129 0.00048 14.8 1.5 1 1 1.4e-05 0.00097 13.8 0.0 2 42 251 288 251 305 0.74 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 3_10 - 227 AAA_18 PF13238.1 129 0.00051 14.7 0.0 1 1 6e-05 0.0042 11.8 0.0 1 18 34 51 34 121 0.82 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 14_1 - 239 AAA_18 PF13238.1 129 0.0018 13.0 0.7 1 1 0.00012 0.0084 10.8 0.7 1 84 102 172 102 224 0.60 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 3_6 - 239 AAA_13 PF13166.1 712 5.4e-06 19.4 0.0 1 2 1.9e-05 0.0026 10.6 0.1 21 40 34 53 19 72 0.85 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_6 - 239 AAA_13 PF13166.1 712 5.4e-06 19.4 0.0 2 2 0.00023 0.033 6.9 0.0 523 575 148 198 140 213 0.87 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_18 - 80 AAA_13 PF13166.1 712 0.00016 14.6 1.0 1 1 1.4e-06 0.00019 14.3 1.0 401 460 5 64 2 67 0.90 # 15126 # 15365 # -1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_104 - 274 CbiA PF01656.18 195 6e-37 121.3 0.3 1 1 8.6e-39 8.1e-37 120.9 0.3 1 193 5 229 5 231 0.79 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 14_1 - 239 CbiA PF01656.18 195 0.00061 13.6 0.6 1 1 9.9e-06 0.00094 13.0 0.2 6 35 106 135 102 227 0.77 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 5_13 - 260 CbiA PF01656.18 195 0.0011 12.7 0.1 1 2 0.0001 0.0098 9.7 0.0 2 30 108 136 108 138 0.91 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 5_13 - 260 CbiA PF01656.18 195 0.0011 12.7 0.1 2 2 0.079 7.4 0.3 0.0 85 101 155 173 143 247 0.77 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 2_12 - 215 Methyltransf_25 PF13649.1 101 7.7e-08 27.1 0.0 1 1 4.7e-10 1.3e-07 26.3 0.0 1 101 49 138 49 138 0.90 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 5_13 - 260 KaiC PF06745.8 227 1.8e-05 18.3 0.1 1 2 0.024 6.8 0.1 0.1 114 145 2 33 1 40 0.86 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 5_13 - 260 KaiC PF06745.8 227 1.8e-05 18.3 0.1 2 2 3.4e-07 9.5e-05 15.9 0.0 16 60 102 145 84 193 0.88 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 14_1 - 239 AAA_14 PF13173.1 128 1.9e-06 22.2 0.2 1 1 2.5e-08 3.6e-06 21.3 0.2 3 74 100 176 98 221 0.68 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 1_46 - 644 AAA_14 PF13173.1 128 0.00038 14.7 0.2 1 2 0.00021 0.03 8.6 0.0 8 42 253 286 249 306 0.79 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 1_46 - 644 AAA_14 PF13173.1 128 0.00038 14.7 0.2 2 2 0.011 1.5 3.1 0.0 52 78 493 524 436 561 0.58 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 3_10 - 227 AAA_29 PF13555.1 62 3.2e-06 21.0 0.1 1 1 6e-08 5.6e-06 20.2 0.1 17 41 26 49 20 63 0.82 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_6 - 239 AAA_29 PF13555.1 62 3.9e-05 17.5 0.1 1 1 7.5e-07 7.1e-05 16.7 0.1 16 40 23 46 17 53 0.82 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 14_1 - 239 AAA_29 PF13555.1 62 0.0013 12.6 0.0 1 1 2.9e-05 0.0027 11.6 0.0 16 39 92 115 82 123 0.84 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 14_1 - 239 AAA PF00004.24 132 1.3e-06 23.1 0.0 1 1 7.1e-09 2e-06 22.4 0.0 1 70 102 172 102 215 0.77 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 14_1 - 239 Bac_DnaA PF00308.13 219 1.4e-08 29.0 0.4 1 1 1.5e-10 2.1e-08 28.4 0.4 34 135 99 198 85 204 0.88 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 5_13 - 260 Bac_DnaA PF00308.13 219 3.1e-08 27.9 0.0 1 1 3.7e-10 5.2e-08 27.1 0.0 37 136 108 204 102 215 0.87 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 1_12 - 284 PGK PF00162.14 384 0.0011 11.9 1.4 1 1 5.4e-06 0.0015 11.4 1.4 173 280 7 124 5 142 0.77 # 7691 # 8542 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.312 4_2 - 200 CobU PF02283.11 167 0.00043 14.1 0.0 1 1 2.7e-06 0.00075 13.3 0.0 37 120 44 122 32 130 0.81 # 614 # 1213 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.387 14_1 - 239 Sigma54_activat PF00158.21 168 5.9e-05 16.9 0.2 1 2 3.7e-06 0.00052 13.9 0.0 18 66 95 143 67 148 0.83 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 14_1 - 239 Sigma54_activat PF00158.21 168 5.9e-05 16.9 0.2 2 2 0.063 8.8 0.1 0.0 96 117 163 185 156 203 0.74 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 1_29 - 443 Sigma54_activat PF00158.21 168 0.00033 14.5 0.0 1 1 7.8e-06 0.0011 12.8 0.0 18 45 207 234 197 250 0.79 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 3_10 - 227 MMR_HSR1 PF01926.18 116 0.0014 13.0 0.2 1 1 2.3e-05 0.0021 12.4 0.2 2 19 34 51 33 202 0.86 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_6 - 239 MMR_HSR1 PF01926.18 116 0.0014 12.9 0.0 1 1 2.5e-05 0.0024 12.2 0.0 3 65 33 114 31 192 0.61 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 1_46 - 644 MMR_HSR1 PF01926.18 116 0.0024 12.2 0.0 1 1 0.00017 0.016 9.6 0.0 4 22 252 270 250 369 0.75 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 3_10 - 227 DUF258 PF03193.11 161 3.6e-05 17.4 0.1 1 1 6.8e-07 6.4e-05 16.6 0.1 33 55 28 51 14 67 0.86 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 14_1 - 239 DUF258 PF03193.11 161 6.1e-05 16.6 0.0 1 1 1.3e-06 0.00012 15.7 0.0 28 56 92 120 68 172 0.76 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 3_6 - 239 DUF258 PF03193.11 161 0.00044 13.8 0.2 1 1 7.7e-06 0.00073 13.1 0.2 20 66 13 60 5 66 0.81 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 1_37 - 879 TraG-D_C PF12696.2 128 2.6e-30 99.3 0.1 1 1 4.3e-32 6.1e-30 98.1 0.1 1 125 589 704 589 706 0.85 # 26027 # 28663 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.336 1_12 - 284 TraG-D_C PF12696.2 128 7.3e-05 17.0 0.0 1 1 2e-06 0.00028 15.1 0.0 14 85 156 218 143 223 0.82 # 7691 # 8542 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.312 1_104 - 274 AAA_31 PF13614.1 157 7.3e-14 46.4 1.2 1 1 1.5e-15 4.1e-13 43.9 1.2 9 154 11 163 3 165 0.75 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_46 - 644 NTPase_1 PF03266.10 168 0.00086 13.4 0.1 1 1 7.8e-06 0.0022 12.1 0.1 3 57 251 305 250 318 0.81 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 3_10 - 227 AAA_33 PF13671.1 143 0.00048 14.4 0.3 1 1 1.5e-05 0.0022 12.3 0.3 2 18 34 50 33 218 0.58 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 14_1 - 239 AAA_33 PF13671.1 143 0.00052 14.3 0.1 1 1 6.3e-06 0.00089 13.5 0.1 2 39 102 144 102 221 0.78 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 2_12 - 215 Methyltransf_26 PF13659.1 117 6.3e-05 17.4 0.0 1 1 4.7e-07 0.00013 16.3 0.0 2 111 47 140 46 143 0.73 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 5_13 - 260 AAA_30 PF13604.1 196 8.8e-05 16.5 0.4 1 1 1.5e-05 0.0014 12.5 0.1 17 52 104 139 97 193 0.76 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 3_10 - 227 AAA_30 PF13604.1 196 0.0002 15.4 0.2 1 2 9e-05 0.0084 10.0 0.0 15 38 28 51 23 63 0.82 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_10 - 227 AAA_30 PF13604.1 196 0.0002 15.4 0.2 2 2 0.01 0.94 3.4 0.1 73 128 135 198 114 207 0.69 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_6 - 239 AAA_30 PF13604.1 196 0.0025 11.8 0.0 1 1 6.3e-05 0.006 10.5 0.0 19 53 30 66 21 72 0.76 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 2_12 - 215 TehB PF03848.9 192 9.8e-06 19.2 1.0 1 1 6.3e-08 1.8e-05 18.4 1.0 31 137 46 147 33 189 0.75 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 1_29 - 443 FtsK_SpoIIIE PF01580.13 205 0.00018 15.4 0.0 1 1 1.7e-06 0.00048 14.0 0.0 24 67 197 240 188 244 0.80 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 2_12 - 215 MTS PF05175.9 170 4e-06 20.7 0.0 1 1 3.3e-08 9.2e-06 19.5 0.0 25 144 41 146 29 170 0.81 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 14_1 - 239 Lon_C PF05362.8 205 0.0021 11.7 0.0 1 1 1.2e-05 0.0033 11.1 0.0 57 106 17 66 9 69 0.94 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 1_46 - 644 Dynamin_N PF00350.18 168 0.0022 12.2 0.0 1 1 2e-05 0.0058 10.8 0.0 3 20 252 269 251 325 0.87 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 3_10 - 227 ABC_tran PF00005.22 137 3.4e-34 112.4 0.0 1 1 6.8e-36 4.8e-34 112.0 0.0 1 136 21 169 21 170 0.90 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_6 - 239 ABC_tran PF00005.22 137 1.2e-31 104.2 0.0 1 1 2.4e-33 1.7e-31 103.7 0.0 1 136 19 162 19 163 0.91 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 14_1 - 239 ABC_tran PF00005.22 137 0.00095 13.9 0.1 1 1 4.5e-05 0.0031 12.2 0.1 8 31 96 119 88 152 0.86 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 1_46 - 644 ABC_tran PF00005.22 137 0.006 11.3 1.5 1 1 0.00019 0.013 10.1 0.4 16 32 252 268 243 275 0.87 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 5_13 - 260 AAA_19 PF13245.1 76 0.0011 13.2 0.0 1 1 7.7e-06 0.0022 12.2 0.0 9 35 105 130 99 140 0.74 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 2_6 - 137 G6PD_N PF00479.17 183 0.00032 15.3 0.6 1 1 1.4e-06 0.0004 15.0 0.6 63 104 20 62 4 94 0.80 # 5544 # 5954 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.224 1_46 - 644 AAA_10 PF12846.2 304 1.3e-61 203.0 0.1 1 1 3.4e-63 1.9e-61 202.4 0.1 3 301 249 597 247 601 0.91 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 3_10 - 227 AAA_10 PF12846.2 304 2.1e-05 18.5 0.1 1 2 3.2e-06 0.00018 15.4 0.0 6 23 36 53 33 73 0.82 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_10 - 227 AAA_10 PF12846.2 304 2.1e-05 18.5 0.1 2 2 0.069 3.9 1.1 0.0 216 262 155 200 115 221 0.84 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 1_37 - 879 AAA_10 PF12846.2 304 3e-05 17.9 2.1 1 1 3e-06 0.00017 15.4 0.4 3 280 182 646 180 667 0.55 # 26027 # 28663 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.336 3_6 - 239 AAA_10 PF12846.2 304 7.2e-05 16.7 0.1 1 2 0.00037 0.021 8.6 0.1 6 22 34 50 31 64 0.85 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_6 - 239 AAA_10 PF12846.2 304 7.2e-05 16.7 0.1 2 2 0.0021 0.12 6.1 0.0 215 261 147 192 106 197 0.81 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 14_1 - 239 AAA_10 PF12846.2 304 0.00049 13.9 0.9 1 1 5.2e-05 0.0029 11.4 0.2 3 29 101 127 99 170 0.82 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 2_12 - 215 NodS PF05401.6 201 2.5e-09 31.1 0.0 1 1 1.3e-11 3.6e-09 30.6 0.0 45 144 47 142 28 152 0.89 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 3_10 - 227 SbcCD_C PF13558.1 90 0.00053 14.3 0.1 1 1 1.7e-05 0.0047 11.2 0.1 54 89 156 185 118 186 0.78 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 5_4 - 306 DUF544 PF04424.8 121 0.00058 14.1 0.3 1 1 8e-06 0.0023 12.1 0.1 21 68 36 82 20 106 0.77 # 2567 # 3484 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.362 5_13 - 260 ResIII PF04851.10 184 4.2e-05 17.8 0.1 1 2 0.00014 0.04 8.1 0.1 22 44 99 124 58 132 0.79 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 5_13 - 260 ResIII PF04851.10 184 4.2e-05 17.8 0.1 2 2 0.00022 0.063 7.4 0.0 112 164 134 189 128 230 0.74 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 2_12 - 215 Methyltransf_31 PF13847.1 152 9.6e-14 45.6 0.2 1 1 4.6e-16 1.3e-13 45.2 0.2 4 137 46 176 43 210 0.79 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 1_46 - 644 Zot PF05707.7 193 9.7e-07 22.8 0.5 1 2 0.098 14 -0.6 0.0 4 15 251 262 250 278 0.84 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 1_46 - 644 Zot PF05707.7 193 9.7e-07 22.8 0.5 2 2 3.9e-08 5.5e-06 20.3 0.1 31 129 454 555 444 556 0.65 # 35262 # 37193 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.330 5_13 - 260 Zot PF05707.7 193 0.00019 15.3 0.0 1 1 2.8e-06 0.0004 14.2 0.0 4 50 109 154 107 206 0.79 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 3_17 - 97 DUF3584 PF12128.3 1201 4.3e-05 15.4 2.1 1 1 1.8e-07 5.2e-05 15.1 2.1 349 437 5 93 2 95 0.93 # 14863 # 15153 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.333 5_13 - 260 TIP49 PF06068.8 398 0.00082 12.5 0.0 1 1 4.2e-06 0.0012 11.9 0.0 49 71 104 126 87 145 0.81 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 3_10 - 227 DEAD PF00270.24 169 0.00025 15.0 0.0 1 1 4.3e-06 0.0004 14.3 0.0 10 150 26 190 13 203 0.73 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 1_29 - 443 DEAD PF00270.24 169 0.00029 14.7 0.0 1 1 8.6e-06 0.00081 13.3 0.0 12 44 209 241 202 375 0.73 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 5_13 - 260 DEAD PF00270.24 169 0.0017 12.2 0.1 1 1 3.6e-05 0.0034 11.2 0.1 10 42 101 133 96 207 0.81 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 1_37 - 879 TrwB_AAD_bind PF10412.4 386 8.8e-16 51.8 0.0 1 2 7.4e-07 0.0001 15.3 0.0 13 163 178 349 172 360 0.87 # 26027 # 28663 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.336 1_37 - 879 TrwB_AAD_bind PF10412.4 386 8.8e-16 51.8 0.0 2 2 1.5e-12 2.2e-10 34.0 0.0 218 365 558 705 540 723 0.76 # 26027 # 28663 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.336 1_29 - 443 TrwB_AAD_bind PF10412.4 386 0.00014 14.9 0.1 1 1 1.9e-06 0.00027 14.0 0.0 15 66 211 261 207 305 0.90 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_104 - 274 ParA PF10609.4 81 0.0019 12.4 0.4 1 2 8.3e-05 0.023 9.0 0.0 2 47 129 172 128 184 0.83 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_104 - 274 ParA PF10609.4 81 0.0019 12.4 0.4 2 2 0.047 13 0.2 0.1 50 75 228 253 215 269 0.70 # 81859 # 82680 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.300 1_37 - 879 T4SS-DNA_transf PF02534.9 469 1.3e-41 137.0 4.8 1 2 2.6e-23 3.7e-21 69.5 0.4 43 258 179 413 138 418 0.71 # 26027 # 28663 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.336 1_37 - 879 T4SS-DNA_transf PF02534.9 469 1.3e-41 137.0 4.8 2 2 3.2e-23 4.5e-21 69.3 0.5 259 434 543 715 516 742 0.86 # 26027 # 28663 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.336 1_12 - 284 T4SS-DNA_transf PF02534.9 469 1e-08 28.5 0.3 1 2 2.7e-09 3.9e-07 23.3 0.0 48 102 27 81 8 92 0.85 # 7691 # 8542 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.312 1_12 - 284 T4SS-DNA_transf PF02534.9 469 1e-08 28.5 0.3 2 2 0.003 0.42 3.4 0.1 296 384 135 213 93 222 0.71 # 7691 # 8542 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.312 2_12 - 215 TIGR00755 TIGR00755 256 0.00049 13.5 0.0 1 1 2.2e-06 0.00063 13.1 0.0 27 116 43 128 21 145 0.82 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 3_6 - 239 ArgK PF03308.11 267 9.1e-05 15.7 0.1 1 1 5.3e-07 0.00015 15.0 0.1 7 49 6 49 2 63 0.79 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 1_18 - 129 EFP PF01132.15 55 0.0015 12.6 1.7 1 2 0.0008 0.23 5.6 0.1 19 36 42 59 41 60 0.88 # 11399 # 11785 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.269 1_18 - 129 EFP PF01132.15 55 0.0015 12.6 1.7 2 2 0.00053 0.15 6.2 0.1 34 53 78 97 73 98 0.88 # 11399 # 11785 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.269 1_29 - 443 Pox_A32 PF04665.7 241 0.00065 13.4 1.2 1 2 0.097 27 -1.8 0.2 177 220 36 75 18 85 0.54 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_29 - 443 Pox_A32 PF04665.7 241 0.00065 13.4 1.2 2 2 4.1e-06 0.0012 12.6 0.1 8 43 206 241 200 262 0.79 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 2_12 - 215 Methyltransf_23 PF13489.1 161 7.9e-13 42.8 0.0 1 2 9.1e-15 2.6e-12 41.1 0.0 14 142 37 166 27 188 0.74 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 2_12 - 215 Methyltransf_23 PF13489.1 161 7.9e-13 42.8 0.0 2 2 0.047 13 -0.2 0.0 39 58 178 197 171 209 0.68 # 10887 # 11531 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.302 14_1 - 239 RNA_helicase PF00910.17 107 4.3e-06 21.3 0.0 1 1 7.4e-08 1e-05 20.0 0.0 1 78 102 187 102 209 0.84 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 1_29 - 443 RNA_helicase PF00910.17 107 0.0006 14.4 0.0 1 1 1.3e-05 0.0019 12.8 0.0 1 64 214 282 214 318 0.70 # 19787 # 21115 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 3_6 - 239 UPF0079 PF02367.12 123 0.0016 12.5 0.1 1 1 1.6e-05 0.0046 11.0 0.0 6 54 20 69 16 82 0.79 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_10 - 227 AAA_24 PF13479.1 213 0.00038 14.4 0.0 1 2 0.00048 0.14 6.1 0.0 7 20 35 48 33 57 0.87 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_10 - 227 AAA_24 PF13479.1 213 0.00038 14.4 0.0 2 2 0.00041 0.11 6.3 0.0 81 141 148 205 143 218 0.72 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 14_1 - 239 NACHT PF05729.7 166 0.001 13.1 0.3 1 2 1.8e-05 0.0052 10.8 0.1 3 29 102 128 100 157 0.81 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 14_1 - 239 NACHT PF05729.7 166 0.001 13.1 0.3 2 2 0.031 8.7 0.3 0.0 81 125 160 198 132 213 0.71 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 14_1 - 239 AAA_25 PF13481.1 194 2.2e-07 24.8 0.0 1 1 2.3e-08 1.6e-06 22.0 0.0 22 63 88 129 67 138 0.82 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 5_13 - 260 AAA_25 PF13481.1 194 0.0001 16.1 0.0 1 1 2.8e-06 0.0002 15.2 0.0 8 65 78 138 72 187 0.84 # 13064 # 13843 # 1 # ID=5_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 3_10 - 227 AAA_25 PF13481.1 194 0.00044 14.0 0.0 1 1 2e-05 0.0014 12.4 0.0 30 50 28 48 19 78 0.85 # 8815 # 9495 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.399 3_6 - 239 AAA_25 PF13481.1 194 0.0014 12.4 0.0 1 1 6.1e-05 0.0043 10.8 0.0 30 54 26 50 7 67 0.83 # 5296 # 6012 # 1 # ID=3_6;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 14_1 - 239 AAA_5 PF07728.9 139 0.0016 12.5 0.0 1 1 1e-05 0.0029 11.7 0.0 1 28 101 131 101 190 0.77 # 3 # 719 # -1 # ID=14_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.356 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/328280a0-f29c-4fc5-952e-80cac657f71a # Target file: checkm_output/bins/pGCA_002184245.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002184245.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/328280a0-f29c-4fc5-952e-80cac657f71a checkm_output/bins/pGCA_002184245.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:49:04 2020 # [ok]