# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 60 RRM_5 PF13893.1 56 5.2e-05 12.3 0.0 1 1 9.7e-06 6.8e-05 11.9 0.0 28 56 30 58 27 58 0.94 # 4355 # 4534 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.489 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/fe4b1474-8a9f-4f9d-8c2c-4499e8a2478b # Target file: checkm_output/bins/pGCA_002173615.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002173615.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/fe4b1474-8a9f-4f9d-8c2c-4499e8a2478b checkm_output/bins/pGCA_002173615.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:48:53 2020 # [ok]