# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_24 - 831 Mg_chelatase PF01078.16 207 0.00053 13.1 0.0 1 1 5.7e-06 0.0012 12.0 0.0 11 46 452 487 449 513 0.88 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 2_47 - 717 ABC_ATPase PF09818.4 448 1e-05 18.2 0.0 1 1 2.5e-07 2.6e-05 16.8 0.0 298 377 594 674 588 686 0.91 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_24 - 228 ABC_ATPase PF09818.4 448 0.00038 13.0 0.0 1 2 6.9e-05 0.0071 8.8 0.0 240 264 26 51 18 85 0.76 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 1_24 - 228 ABC_ATPase PF09818.4 448 0.00038 13.0 0.0 2 2 0.0072 0.73 2.2 0.0 322 371 141 190 132 201 0.84 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 1_24 - 228 IstB_IS21 PF01695.12 178 0.00042 13.7 0.0 1 2 2.6e-05 0.0054 10.1 0.0 44 66 28 50 12 56 0.85 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 1_24 - 228 IstB_IS21 PF01695.12 178 0.00042 13.7 0.0 2 2 0.013 2.7 1.3 0.0 104 150 155 203 142 212 0.74 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_63 - 261 MipZ PF09140.6 261 3.3e-13 43.2 0.1 1 2 3.3e-07 2.2e-05 17.5 0.0 2 43 4 46 3 58 0.86 # 54170 # 54952 # 1 # ID=2_63;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.340 2_63 - 261 MipZ PF09140.6 261 3.3e-13 43.2 0.1 2 2 4.3e-09 2.9e-07 23.7 0.0 58 143 80 162 61 180 0.79 # 54170 # 54952 # 1 # ID=2_63;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.340 3_5 - 231 MipZ PF09140.6 261 2.3e-08 27.3 0.0 1 1 1e-09 6.9e-08 25.7 0.0 2 108 48 165 47 191 0.69 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 4_1 - 284 MipZ PF09140.6 261 5e-06 19.6 0.0 1 2 9.8e-06 0.00067 12.7 0.0 3 43 6 47 4 63 0.79 # 623 # 1474 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.313 4_1 - 284 MipZ PF09140.6 261 5e-06 19.6 0.0 2 2 0.0024 0.17 4.8 0.0 80 125 119 164 96 172 0.80 # 623 # 1474 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.313 2_63 - 261 YhjQ PF06564.7 244 7.7e-10 32.4 0.0 1 1 1.7e-11 1.2e-09 31.8 0.0 7 149 8 149 2 162 0.81 # 54170 # 54952 # 1 # ID=2_63;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.340 4_1 - 284 YhjQ PF06564.7 244 0.00017 14.9 0.0 1 1 6e-06 0.00041 13.6 0.0 10 174 12 192 4 199 0.64 # 623 # 1474 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.313 3_5 - 231 YhjQ PF06564.7 244 0.001 12.4 0.0 1 1 3.5e-05 0.0024 11.1 0.0 12 154 57 193 47 210 0.73 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 2_23 - 153 SSB PF00436.20 104 3.5e-38 123.6 0.8 1 1 7.2e-40 4.9e-38 123.1 0.8 1 104 2 103 2 103 0.98 # 21622 # 22080 # 1 # ID=2_23;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.386 1_56 - 170 SSB PF00436.20 104 5.6e-38 123.0 0.2 1 1 1.1e-39 7.7e-38 122.5 0.2 1 104 2 103 2 103 0.98 # 47435 # 47944 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.359 2_32 - 139 SSB PF00436.20 104 3.4e-32 104.4 0.1 1 1 6.7e-34 4.5e-32 104.0 0.1 2 104 2 102 1 102 0.96 # 32923 # 33339 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.369 2_27 - 753 DUF87 PF01935.12 229 8.4e-11 36.0 6.5 1 1 1.8e-12 9e-11 35.9 0.1 11 154 222 408 213 458 0.67 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 1_77 - 786 DUF87 PF01935.12 229 2.1e-08 28.1 0.0 1 2 0.095 4.8 0.8 1.1 108 184 57 132 11 187 0.80 # 66010 # 68367 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.369 1_77 - 786 DUF87 PF01935.12 229 2.1e-08 28.1 0.0 2 2 4.1e-10 2.1e-08 28.1 0.0 29 124 455 558 452 650 0.74 # 66010 # 68367 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.369 2_24 - 831 DUF87 PF01935.12 229 0.00029 14.6 0.2 1 1 2.4e-05 0.0012 12.6 0.0 27 131 467 569 463 698 0.65 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 2_47 - 717 DUF87 PF01935.12 229 0.00048 13.9 0.2 1 1 3.6e-05 0.0018 12.0 0.2 25 45 510 530 508 538 0.91 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 3_12 - 341 NmrA PF05368.8 233 8.1e-07 22.4 0.0 1 1 1.6e-08 1.6e-06 21.4 0.0 2 76 8 85 7 143 0.83 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 3_7 - 606 NmrA PF05368.8 233 0.00081 12.6 0.6 1 1 2.2e-05 0.0023 11.1 0.6 1 106 285 413 285 424 0.72 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 1_24 - 228 AAA_22 PF13401.1 131 9.5e-07 23.0 0.7 1 1 5.5e-07 2.8e-05 18.2 0.7 3 124 30 200 28 207 0.67 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 AAA_22 PF13401.1 131 1.8e-06 22.1 2.0 1 1 6.1e-07 3.1e-05 18.0 2.0 7 114 511 668 507 694 0.75 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_24 - 831 AAA_22 PF13401.1 131 2.3e-06 21.7 0.0 1 1 2.3e-07 1.2e-05 19.4 0.0 4 69 463 531 459 625 0.62 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 2_27 - 753 AAA_22 PF13401.1 131 0.00017 15.7 0.0 1 1 1.8e-05 0.00091 13.3 0.0 5 68 234 292 232 358 0.79 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 3_5 - 231 SRP54 PF00448.17 196 4.4e-05 16.9 0.6 1 1 3.6e-07 7.4e-05 16.2 0.1 11 40 57 86 47 119 0.90 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 1_24 - 228 AAA_15 PF13175.1 415 0.00012 15.0 6.1 1 2 3.8e-06 0.00077 12.4 0.7 17 72 25 90 2 106 0.70 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 1_24 - 228 AAA_15 PF13175.1 415 0.00012 15.0 6.1 2 2 0.00049 0.099 5.5 0.5 367 414 160 204 138 205 0.89 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 AAA_17 PF13207.1 121 1.3e-06 23.1 0.2 1 1 7.6e-08 5.1e-06 21.2 0.2 1 23 510 532 510 557 0.78 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_24 - 228 AAA_17 PF13207.1 121 7e-06 20.8 0.1 1 1 2.1e-07 1.4e-05 19.8 0.1 2 20 34 52 33 102 0.87 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_27 - 753 AAA_17 PF13207.1 121 2.8e-05 18.9 0.5 1 1 2.1e-06 0.00015 16.5 0.0 7 63 241 296 236 513 0.83 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 1_24 - 228 AAA_21 PF13304.1 303 8e-18 59.3 3.1 1 1 1.8e-17 1.9e-15 51.5 3.1 2 302 34 205 33 206 0.87 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 AAA_21 PF13304.1 303 2.6e-09 31.3 2.3 1 2 2.2e-05 0.0022 11.8 0.0 3 64 512 583 511 592 0.80 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_47 - 717 AAA_21 PF13304.1 303 2.6e-09 31.3 2.3 2 2 3.4e-07 3.4e-05 17.8 0.8 236 287 619 667 598 676 0.86 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_47 - 717 MobB PF03205.9 140 0.00041 14.0 0.0 1 1 2.4e-05 0.0016 12.1 0.0 3 24 511 532 510 550 0.87 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_24 - 228 MobB PF03205.9 140 0.00073 13.2 0.0 1 1 2.4e-05 0.0016 12.0 0.0 2 19 33 50 32 54 0.89 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_27 - 753 MobB PF03205.9 140 0.0025 11.4 1.2 1 1 6.3e-05 0.0043 10.7 0.0 3 32 236 265 234 273 0.85 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 2_63 - 261 ArsA_ATPase PF02374.10 305 1.9e-08 27.6 1.4 1 1 8.6e-09 5.9e-07 22.7 1.4 9 137 11 128 3 240 0.64 # 54170 # 54952 # 1 # ID=2_63;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.340 4_1 - 284 ArsA_ATPase PF02374.10 305 3.1e-07 23.6 0.0 1 1 7.5e-09 5.1e-07 22.9 0.0 6 136 9 147 4 197 0.78 # 623 # 1474 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.313 3_5 - 231 ArsA_ATPase PF02374.10 305 1.3e-05 18.3 0.7 1 2 5.3e-06 0.00036 13.5 0.1 3 38 48 84 46 124 0.89 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 3_5 - 231 ArsA_ATPase PF02374.10 305 1.3e-05 18.3 0.7 2 2 0.007 0.48 3.3 0.0 124 136 153 165 134 170 0.79 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 1_24 - 228 T2SE PF00437.15 272 2.5e-05 17.1 0.0 1 1 5.9e-07 6e-05 15.9 0.0 103 147 6 50 2 60 0.87 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_27 - 753 T2SE PF00437.15 272 0.00023 14.0 0.0 1 1 4.8e-06 0.00049 12.9 0.0 127 161 232 266 200 277 0.84 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 3_12 - 341 Shikimate_DH PF01488.15 135 8.3e-06 19.9 0.2 1 1 1.1e-07 2.2e-05 18.5 0.1 14 117 5 119 1 136 0.67 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 3_12 - 341 F420_oxidored PF03807.12 96 4.2e-05 17.9 0.0 1 2 4.3e-06 0.00088 13.6 0.0 5 69 9 81 5 89 0.76 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 3_12 - 341 F420_oxidored PF03807.12 96 4.2e-05 17.9 0.0 2 2 0.031 6.4 1.3 0.0 8 41 232 262 230 277 0.67 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 1_24 - 228 SMC_N PF02463.14 220 1.4e-09 31.3 0.2 1 1 1.3e-10 1.4e-08 28.2 0.2 25 212 32 215 18 220 0.80 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 SMC_N PF02463.14 220 0.00013 15.1 0.2 1 1 6.8e-05 0.0069 9.5 0.1 136 208 619 686 492 694 0.68 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_63 - 261 Fer4_NifH PF00142.13 273 8.4e-09 28.8 0.6 1 2 2.5e-09 2.5e-07 24.0 0.0 7 68 10 76 3 90 0.83 # 54170 # 54952 # 1 # ID=2_63;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.340 2_63 - 261 Fer4_NifH PF00142.13 273 8.4e-09 28.8 0.6 2 2 0.0042 0.43 3.6 0.1 153 247 154 253 112 258 0.74 # 54170 # 54952 # 1 # ID=2_63;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.340 3_5 - 231 Fer4_NifH PF00142.13 273 2.5e-05 17.4 0.0 1 1 5.1e-07 5.2e-05 16.4 0.0 10 40 57 87 47 130 0.76 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 1_24 - 228 Arch_ATPase PF01637.13 234 0.00065 13.3 0.6 1 1 6.3e-06 0.0013 12.4 0.2 8 38 21 49 12 128 0.87 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 1_24 - 228 AAA_16 PF13191.1 185 5e-06 20.5 0.0 1 1 1.2e-07 8.1e-06 19.8 0.0 18 52 25 60 13 101 0.78 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 AAA_16 PF13191.1 185 2.2e-05 18.4 0.1 1 1 2.1e-06 0.00014 15.8 0.1 27 72 511 555 502 669 0.70 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_24 - 831 AAA_16 PF13191.1 185 0.0014 12.6 0.0 1 1 5.7e-05 0.0039 11.1 0.0 25 44 464 483 452 497 0.87 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 1_24 - 228 AAA_23 PF13476.1 202 2.6e-05 18.5 1.7 1 1 1.8e-07 3.6e-05 18.1 1.7 10 42 21 54 2 197 0.75 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 1_24 - 228 AAA_18 PF13238.1 129 3.2e-05 18.2 0.0 1 1 1.4e-06 9.6e-05 16.6 0.0 1 20 34 53 34 123 0.76 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 AAA_18 PF13238.1 129 4.7e-05 17.6 0.0 1 1 1.6e-06 0.00011 16.4 0.0 1 19 511 529 511 557 0.83 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_27 - 753 AAA_18 PF13238.1 129 0.0074 10.5 0.0 1 1 0.00011 0.0074 10.5 0.0 5 23 240 269 236 330 0.70 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 3_7 - 606 adh_short PF00106.20 167 3.3e-11 37.3 0.0 1 1 6e-13 6.1e-11 36.4 0.0 1 136 283 411 283 423 0.83 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_12 - 341 adh_short PF00106.20 167 2.6e-08 27.8 0.0 1 1 9.4e-10 9.6e-08 26.0 0.0 1 122 5 111 5 141 0.79 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 1_24 - 228 AAA_13 PF13166.1 712 0.002 10.5 0.5 1 2 0.001 0.21 3.8 0.1 21 42 36 57 23 101 0.78 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 1_24 - 228 AAA_13 PF13166.1 712 0.002 10.5 0.5 2 2 0.00038 0.078 5.2 0.1 525 575 157 206 148 217 0.86 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 3_7 - 606 GFO_IDH_MocA PF01408.17 120 5.3e-05 17.7 0.0 1 1 2.2e-06 0.00022 15.6 0.0 2 74 143 218 142 238 0.85 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_8 - 211 GFO_IDH_MocA PF01408.17 120 0.001 13.5 0.1 1 1 2.2e-05 0.0022 12.4 0.0 2 70 2 67 1 87 0.75 # 6334 # 6966 # 1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.324 2_63 - 261 CbiA PF01656.18 195 7e-40 130.4 0.5 1 1 1.3e-41 8.5e-40 130.1 0.5 1 190 5 218 5 223 0.85 # 54170 # 54952 # 1 # ID=2_63;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.340 4_1 - 284 CbiA PF01656.18 195 4.9e-24 78.7 0.0 1 1 9.7e-26 6.6e-24 78.3 0.0 2 193 7 238 6 240 0.83 # 623 # 1474 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.313 3_5 - 231 CbiA PF01656.18 195 2.2e-17 57.0 0.1 1 1 4.3e-19 2.9e-17 56.6 0.1 1 158 49 218 49 227 0.72 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 1_24 - 228 IIGP PF05049.8 376 0.00053 12.7 0.0 1 1 4.2e-06 0.00087 12.0 0.0 37 59 33 55 3 61 0.73 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 3_7 - 606 Polysacc_synt_2 PF02719.10 294 2e-124 408.1 0.8 1 1 2.9e-126 2e-124 408.1 0.8 1 291 285 567 285 570 0.97 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_12 - 341 Polysacc_synt_2 PF02719.10 294 3e-108 355.0 1.8 1 1 5.4e-110 3.7e-108 354.7 1.8 1 292 7 281 7 283 0.98 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 3_13 - 370 Polysacc_synt_2 PF02719.10 294 8.5e-11 35.1 0.0 1 2 0.00077 0.053 6.3 0.0 1 32 3 34 3 37 0.89 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 3_13 - 370 Polysacc_synt_2 PF02719.10 294 8.5e-11 35.1 0.0 2 2 3.8e-10 2.6e-08 27.0 0.0 68 245 39 214 32 228 0.83 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 1_24 - 228 KaiC PF06745.8 227 0.00048 13.2 0.2 1 2 0.00019 0.04 6.9 0.1 16 35 28 47 20 53 0.89 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 1_24 - 228 KaiC PF06745.8 227 0.00048 13.2 0.2 2 2 0.0012 0.25 4.3 0.0 137 161 177 202 161 224 0.86 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_24 - 831 AAA_14 PF13173.1 128 0.0013 12.6 3.3 1 2 8.7e-05 0.018 8.9 0.1 3 42 464 504 462 625 0.78 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 2_24 - 831 AAA_14 PF13173.1 128 0.0013 12.6 3.3 2 2 0.065 13 -0.4 0.0 52 75 674 703 654 767 0.69 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 2_59 - 444 TIGR03594 TIGR03594 432 0.00043 12.9 0.2 1 2 0.073 15 -2.0 0.0 392 423 87 118 85 125 0.80 # 51341 # 52672 # 1 # ID=2_59;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.409 2_59 - 444 TIGR03594 TIGR03594 432 0.00043 12.9 0.2 2 2 5.1e-06 0.001 11.7 0.0 350 424 335 409 282 412 0.90 # 51341 # 52672 # 1 # ID=2_59;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.409 1_24 - 228 AAA_29 PF13555.1 62 8.5e-07 22.4 0.1 1 1 2.4e-08 1.7e-06 21.5 0.1 18 40 27 48 18 51 0.83 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 AAA_29 PF13555.1 62 0.00015 15.2 0.1 1 1 5.1e-06 0.00035 14.0 0.1 18 39 504 524 497 537 0.84 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_24 - 831 AAA_29 PF13555.1 62 0.0009 12.7 0.2 1 1 5.5e-05 0.0037 10.7 0.1 22 40 463 480 454 489 0.87 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 3_7 - 606 KR PF08659.5 181 3.8e-08 27.1 0.0 1 1 7.9e-10 8.1e-08 26.0 0.0 2 135 284 409 283 414 0.82 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_12 - 341 KR PF08659.5 181 4.9e-05 16.9 0.0 1 1 1.2e-06 0.00013 15.6 0.0 3 72 7 71 6 91 0.75 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 1_24 - 228 MMR_HSR1 PF01926.18 116 9.4e-06 19.5 0.4 1 1 1.3e-07 2.7e-05 18.0 0.4 2 56 34 130 33 225 0.54 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 1_24 - 228 DUF258 PF03193.11 161 4.7e-07 23.0 0.0 1 1 8.4e-09 8.6e-07 22.2 0.0 23 55 18 51 2 65 0.81 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 DUF258 PF03193.11 161 0.0013 11.9 0.0 1 1 2.5e-05 0.0025 10.9 0.0 25 57 497 530 476 546 0.74 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_81 - 593 TraG-D_C PF12696.2 128 3.7e-27 88.7 0.0 1 1 7.7e-29 7.8e-27 87.6 0.0 1 127 405 519 405 520 0.85 # 69863 # 71641 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.376 2_27 - 753 TraG-D_C PF12696.2 128 7.7e-14 45.6 0.0 1 1 7.6e-16 7.7e-14 45.6 0.0 2 127 592 717 591 718 0.84 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 3_16 - 389 NAD_binding_2 PF03446.10 163 6.3e-05 16.8 0.2 1 2 5.8e-05 0.012 9.4 0.0 3 113 2 136 1 139 0.76 # 14523 # 15689 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.361 3_16 - 389 NAD_binding_2 PF03446.10 163 6.3e-05 16.8 0.2 2 2 0.0035 0.72 3.6 0.1 16 61 321 363 319 381 0.72 # 14523 # 15689 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.361 3_5 - 231 AAA_31 PF13614.1 157 1.1e-28 94.0 0.0 1 1 2e-30 1.4e-28 93.7 0.0 1 156 47 194 47 195 0.94 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 2_63 - 261 AAA_31 PF13614.1 157 1.3e-14 48.3 0.1 1 1 6e-16 4.1e-14 46.7 0.0 1 155 3 154 3 156 0.82 # 54170 # 54952 # 1 # ID=2_63;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.340 4_1 - 284 AAA_31 PF13614.1 157 2e-05 18.5 0.1 1 1 1.1e-06 7.6e-05 16.6 0.1 9 156 12 175 6 176 0.71 # 623 # 1474 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.313 1_24 - 228 AAA_33 PF13671.1 143 0.00019 15.3 0.2 1 1 5.2e-06 0.00053 13.8 0.2 1 18 33 50 33 204 0.85 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 AAA_33 PF13671.1 143 0.00019 15.2 0.1 1 1 3.6e-06 0.00036 14.3 0.1 2 20 511 529 511 644 0.84 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 3_5 - 231 KTI12 PF08433.5 270 0.0015 11.6 0.0 1 1 1.3e-05 0.0027 10.8 0.0 4 39 50 85 48 99 0.84 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 3_16 - 389 NAD_Gly3P_dh_N PF01210.18 157 2.6e-06 21.1 0.0 1 1 6.3e-08 1.3e-05 18.9 0.0 2 80 3 84 2 89 0.86 # 14523 # 15689 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.361 3_16 - 389 2-Hacid_dh_C PF02826.14 178 0.00011 15.3 0.1 1 2 0.0058 1.2 2.2 0.0 39 93 3 58 1 105 0.84 # 14523 # 15689 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.361 3_16 - 389 2-Hacid_dh_C PF02826.14 178 0.00011 15.3 0.1 2 2 1.7e-05 0.0034 10.4 0.0 50 97 320 365 318 372 0.84 # 14523 # 15689 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.361 2_27 - 753 AAA_30 PF13604.1 196 0.001 12.6 0.3 1 1 2.6e-05 0.0054 10.2 0.0 20 142 235 368 229 372 0.69 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 1_68 - 169 RuvA_N PF01330.16 61 0.0009 13.0 0.2 1 1 1e-05 0.002 11.8 0.1 18 55 66 103 61 109 0.88 # 58967 # 59473 # -1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.314 2_27 - 753 FtsK_SpoIIIE PF01580.13 205 1.1e-06 22.2 0.0 1 1 3.4e-08 2.3e-06 21.1 0.0 22 89 216 282 205 299 0.82 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 2_24 - 831 FtsK_SpoIIIE PF01580.13 205 0.0015 11.9 0.0 1 1 6e-05 0.0041 10.5 0.0 27 79 452 500 435 521 0.78 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 1_24 - 228 FtsK_SpoIIIE PF01580.13 205 0.0017 11.8 0.1 1 1 4.2e-05 0.0029 11.0 0.1 33 56 26 49 18 51 0.86 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 3_7 - 606 CoA_binding_3 PF13727.1 175 1.7e-19 64.2 0.2 1 1 3.4e-21 3.5e-19 63.2 0.2 14 175 72 240 61 240 0.89 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_8 - 211 CoA_binding_3 PF13727.1 175 0.00012 15.8 0.0 1 1 1.8e-06 0.00018 15.3 0.0 81 141 4 62 1 65 0.87 # 6334 # 6966 # 1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.324 3_8 - 211 CoA_binding PF02629.14 96 6.7e-05 17.3 0.8 1 1 5.6e-07 0.00012 16.6 0.1 5 90 2 87 1 90 0.91 # 6334 # 6966 # 1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.324 2_47 - 717 ABC_tran PF00005.22 137 3.2e-35 115.3 0.0 1 1 1e-36 7e-35 114.2 0.0 1 137 498 648 498 648 0.89 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_24 - 228 ABC_tran PF00005.22 137 2.5e-34 112.4 0.0 1 1 4.7e-36 3.2e-34 112.1 0.0 1 136 21 169 21 170 0.95 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_24 - 831 ABC_tran PF00005.22 137 0.0017 12.6 0.1 1 1 0.00014 0.0095 10.2 0.0 14 74 466 527 460 581 0.59 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 1_24 - 228 TIGR03263 TIGR03263 180 0.001 12.3 0.0 1 1 8.2e-06 0.0017 11.6 0.0 2 21 32 51 31 60 0.86 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 3_13 - 370 NAD_binding_4 PF07993.7 249 8.1e-13 41.7 0.2 1 3 0.00013 0.0086 8.9 0.0 1 17 5 21 5 31 0.88 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 3_13 - 370 NAD_binding_4 PF07993.7 249 8.1e-13 41.7 0.2 2 3 0.005 0.34 3.6 0.0 78 136 37 94 25 98 0.79 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 3_13 - 370 NAD_binding_4 PF07993.7 249 8.1e-13 41.7 0.2 3 3 6e-10 4.1e-08 26.3 0.0 161 247 96 178 91 180 0.77 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 3_7 - 606 NAD_binding_4 PF07993.7 249 4.7e-12 39.2 0.0 1 1 2e-12 1.4e-10 34.4 0.0 1 139 287 414 287 487 0.83 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_12 - 341 NAD_binding_4 PF07993.7 249 4.3e-09 29.5 0.0 1 1 4.4e-10 3e-08 26.7 0.0 1 152 9 142 9 168 0.79 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 3_16 - 389 UDPG_MGDP_dh_N PF03721.9 185 1.6e-37 122.6 0.0 1 1 1.4e-39 2.8e-37 121.8 0.0 1 179 1 168 1 174 0.92 # 14523 # 15689 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.361 3_5 - 231 AAA_19 PF13245.1 76 7e-06 19.7 0.1 1 1 1.4e-07 1.4e-05 18.7 0.1 13 48 50 81 38 87 0.88 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 2_24 - 831 AAA_19 PF13245.1 76 0.00015 15.4 0.0 1 1 3.1e-06 0.00031 14.4 0.0 9 55 462 504 454 522 0.71 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 3_7 - 606 RmlD_sub_bind PF04321.12 287 5.5e-18 58.7 0.3 1 1 1.9e-18 1.3e-16 54.2 0.3 3 157 285 456 283 539 0.84 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_13 - 370 RmlD_sub_bind PF04321.12 287 1.1e-11 38.0 0.0 1 2 2.4e-06 0.00016 14.5 0.0 1 39 1 35 1 63 0.74 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 3_13 - 370 RmlD_sub_bind PF04321.12 287 1.1e-11 38.0 0.0 2 2 1.8e-08 1.2e-06 21.5 0.0 123 179 101 164 96 214 0.80 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 3_12 - 341 RmlD_sub_bind PF04321.12 287 9.2e-09 28.4 0.0 1 1 1.1e-09 7.1e-08 25.5 0.0 3 102 7 125 5 261 0.91 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 3_12 - 341 NAD_binding_10 PF13460.1 183 3.1e-10 34.2 0.0 1 1 1e-11 6.9e-10 33.1 0.0 2 103 8 129 7 156 0.82 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 3_7 - 606 NAD_binding_10 PF13460.1 183 1.2e-06 22.5 0.7 1 1 1e-07 7e-06 20.1 0.6 1 101 285 413 285 476 0.77 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_13 - 370 NAD_binding_10 PF13460.1 183 1.7e-06 22.0 0.0 1 1 5.6e-07 3.8e-05 17.7 0.0 1 181 3 184 3 186 0.67 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 1_77 - 786 AAA_10 PF12846.2 304 1.4e-39 130.2 0.3 1 1 4.7e-41 1.4e-39 130.2 0.3 1 303 449 740 449 741 0.87 # 66010 # 68367 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.369 2_24 - 831 AAA_10 PF12846.2 304 6.8e-36 118.1 0.3 1 1 4.2e-37 1.2e-35 117.3 0.3 1 303 463 769 463 770 0.87 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 2_27 - 753 AAA_10 PF12846.2 304 9.2e-19 61.8 0.7 1 1 8.6e-20 2.5e-18 60.4 0.7 1 297 233 665 233 670 0.81 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 1_81 - 593 AAA_10 PF12846.2 304 4.8e-10 33.2 0.3 1 1 2.4e-11 7e-10 32.7 0.3 1 286 134 468 134 479 0.73 # 69863 # 71641 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.376 1_24 - 228 AAA_10 PF12846.2 304 2.4e-06 21.0 0.0 1 2 8.1e-06 0.00024 14.5 0.1 4 21 34 51 31 63 0.88 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 1_24 - 228 AAA_10 PF12846.2 304 2.4e-06 21.0 0.0 2 2 0.0076 0.22 4.8 0.0 217 264 156 203 74 207 0.82 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 AAA_10 PF12846.2 304 0.00047 13.5 0.1 1 1 3.4e-05 0.001 12.5 0.1 5 25 512 532 509 541 0.86 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 3_5 - 231 AAA_10 PF12846.2 304 0.00095 12.5 0.1 1 1 5.2e-05 0.0015 11.9 0.1 7 37 53 83 48 101 0.91 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 1_24 - 228 SbcCD_C PF13558.1 90 0.00029 14.7 0.1 1 1 1.9e-05 0.002 12.0 0.1 28 89 137 185 121 186 0.75 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 SbcCD_C PF13558.1 90 0.0076 10.1 2.3 1 1 0.00025 0.026 8.4 0.3 32 85 619 659 602 663 0.70 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_54 - 194 LCM PF04072.9 183 0.0017 11.8 0.0 1 1 1.2e-05 0.0025 11.3 0.0 90 124 62 96 61 130 0.85 # 46645 # 47226 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.392 3_12 - 341 3Beta_HSD PF01073.14 280 1.9e-21 69.9 0.3 1 2 1.3e-22 9e-21 67.6 0.2 1 122 8 130 8 155 0.90 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 3_12 - 341 3Beta_HSD PF01073.14 280 1.9e-21 69.9 0.3 2 2 0.064 4.4 -0.2 0.0 13 56 237 277 232 290 0.74 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 3_7 - 606 3Beta_HSD PF01073.14 280 1.3e-13 44.2 0.0 1 1 9e-15 6.1e-13 41.9 0.0 1 119 286 413 286 428 0.75 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_13 - 370 3Beta_HSD PF01073.14 280 1.7e-08 27.3 0.0 1 2 5.6e-07 3.8e-05 16.4 0.0 1 37 4 39 4 42 0.89 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 3_13 - 370 3Beta_HSD PF01073.14 280 1.7e-08 27.3 0.0 2 2 3.7e-05 0.0025 10.4 0.0 57 137 37 115 32 128 0.82 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 2_27 - 753 ResIII PF04851.10 184 0.00045 14.0 3.0 1 1 3.3e-06 0.00067 13.4 0.0 4 52 187 261 184 296 0.86 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 3_7 - 606 DXP_reductoisom PF02670.11 129 0.065 7.7 7.5 1 2 0.054 11 0.5 0.6 1 13 285 297 285 314 0.84 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_7 - 606 DXP_reductoisom PF02670.11 129 0.065 7.7 7.5 2 2 0.00016 0.033 8.7 0.7 19 94 330 405 316 413 0.81 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_7 - 606 Epimerase PF01370.16 236 5.6e-26 85.3 0.0 1 1 6.7e-27 4.6e-25 82.3 0.0 1 215 285 488 285 507 0.83 # 4506 # 6323 # 1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382 3_13 - 370 Epimerase PF01370.16 236 2e-24 80.2 0.1 1 1 1.2e-24 8.4e-23 74.9 0.1 1 223 3 184 3 193 0.86 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 3_12 - 341 Epimerase PF01370.16 236 1.3e-23 77.5 0.0 1 1 4.2e-24 2.8e-22 73.1 0.0 2 232 8 221 7 224 0.85 # 9938 # 10960 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.366 2_27 - 753 DEAD PF00270.24 169 0.00015 15.2 0.0 1 2 9.3e-06 0.0019 11.6 0.0 14 40 233 259 216 366 0.66 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 2_27 - 753 DEAD PF00270.24 169 0.00015 15.2 0.0 2 2 0.021 4.2 0.7 0.0 107 142 580 613 537 641 0.78 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 2_27 - 753 DUF853 PF05872.7 504 2.6e-06 19.9 0.0 1 1 2.4e-08 4.8e-06 19.0 0.0 12 93 224 304 213 311 0.85 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 1_81 - 593 TrwB_AAD_bind PF10412.4 386 8e-15 48.2 0.0 1 1 2.7e-15 2.7e-13 43.1 0.0 14 376 133 529 127 536 0.74 # 69863 # 71641 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.376 2_27 - 753 TrwB_AAD_bind PF10412.4 386 2e-13 43.6 0.1 1 3 4.9e-07 5e-05 15.9 0.0 15 54 233 272 222 289 0.91 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 2_27 - 753 TrwB_AAD_bind PF10412.4 386 2e-13 43.6 0.1 2 3 0.099 10 -1.5 0.1 311 368 406 466 402 476 0.65 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 2_27 - 753 TrwB_AAD_bind PF10412.4 386 2e-13 43.6 0.1 3 3 1.7e-09 1.7e-07 24.0 0.0 216 366 562 717 506 733 0.72 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 2_24 - 831 AAA_11 PF13086.1 236 0.00014 15.4 0.2 1 2 0.074 15 -1.1 0.1 140 174 281 313 229 361 0.57 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 2_24 - 831 AAA_11 PF13086.1 236 0.00014 15.4 0.2 2 2 3.6e-06 0.00073 13.0 0.0 7 66 453 504 449 619 0.71 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 2_47 - 717 Sigma54_activ_2 PF14532.1 138 0.00086 13.3 0.0 1 1 1.2e-05 0.0025 11.8 0.0 21 64 508 551 497 597 0.77 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 3_5 - 231 ParA PF10609.4 81 7.7e-07 22.9 0.1 1 1 9.9e-09 2e-06 21.5 0.1 2 65 157 219 156 225 0.92 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 2_23 - 153 tRNA_anti_2 PF13742.1 99 0.00088 13.1 0.0 1 1 6.6e-06 0.0014 12.5 0.0 50 85 47 81 27 97 0.80 # 21622 # 22080 # 1 # ID=2_23;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.386 1_81 - 593 T4SS-DNA_transf PF02534.9 469 7.4e-48 157.1 0.3 1 1 4.5e-50 9.2e-48 156.8 0.3 18 395 112 497 94 553 0.81 # 69863 # 71641 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.376 3_13 - 370 DapB_N PF01113.15 124 0.00033 14.5 0.0 1 1 7.7e-05 0.0078 10.1 0.0 1 23 1 23 1 47 0.87 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 3_8 - 211 DapB_N PF01113.15 124 0.00068 13.5 0.0 1 1 1.1e-05 0.0012 12.7 0.0 1 45 1 43 1 78 0.80 # 6334 # 6966 # 1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.324 1_24 - 228 ArgK PF03308.11 267 0.00039 13.1 0.0 1 1 5.9e-06 0.0006 12.5 0.0 11 50 13 52 6 61 0.88 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 3_5 - 231 ArgK PF03308.11 267 0.001 11.7 0.1 1 1 1.6e-05 0.0016 11.1 0.1 31 66 48 84 13 89 0.72 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 1_46 - 227 Ribosom_S12_S23 PF00164.20 122 0.00077 12.8 0.0 1 1 6.3e-06 0.0013 12.1 0.0 51 86 130 166 112 178 0.87 # 43057 # 43737 # -1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 3_13 - 370 Ldh_1_N PF00056.18 141 0.00023 14.9 0.0 1 2 3.7e-05 0.0076 10.0 0.0 1 34 1 33 1 41 0.85 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 3_13 - 370 Ldh_1_N PF00056.18 141 0.00023 14.9 0.0 2 2 0.0084 1.7 2.4 0.0 65 116 42 91 36 101 0.86 # 10957 # 12066 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.346 1_24 - 228 RNA_helicase PF00910.17 107 6.8e-05 17.0 0.0 1 1 1.6e-06 0.00016 15.8 0.0 1 69 34 105 34 127 0.67 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_24 - 831 RNA_helicase PF00910.17 107 0.00043 14.4 0.1 1 2 0.04 4.1 1.6 0.0 26 86 272 347 251 359 0.64 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 2_24 - 831 RNA_helicase PF00910.17 107 0.00043 14.4 0.1 2 2 0.00022 0.023 8.9 0.0 2 19 467 484 466 509 0.80 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 8_1 - 103 Terminase_GpA PF05876.7 557 0.0022 10.3 0.6 1 2 0.0013 0.27 3.3 0.0 404 434 18 47 13 66 0.86 # 3 # 311 # -1 # ID=8_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.395 8_1 - 103 Terminase_GpA PF05876.7 557 0.0022 10.3 0.6 2 2 0.00031 0.063 5.4 0.6 200 235 67 102 61 103 0.92 # 3 # 311 # -1 # ID=8_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.395 1_21 - 189 IlvN PF07991.7 165 0.00097 12.4 0.4 1 1 5.7e-06 0.0012 12.2 0.4 2 60 91 150 90 182 0.78 # 23726 # 24292 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 2_23 - 153 tRNA_anti-codon PF01336.20 75 1.1e-06 22.4 0.1 1 1 2.6e-08 1.8e-06 21.7 0.1 27 72 47 95 5 103 0.86 # 21622 # 22080 # 1 # ID=2_23;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.386 1_56 - 170 tRNA_anti-codon PF01336.20 75 1.1e-05 19.2 0.1 1 1 2.6e-07 1.7e-05 18.5 0.1 27 70 47 98 5 103 0.83 # 47435 # 47944 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.359 2_32 - 139 tRNA_anti-codon PF01336.20 75 1.5e-05 18.8 0.1 1 1 4.4e-07 3e-05 17.8 0.0 26 61 45 84 39 102 0.81 # 32923 # 33339 # 1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.369 2_27 - 753 UvrD-helicase PF00580.16 315 0.00025 14.3 3.6 1 3 0.017 3.4 0.7 0.0 181 228 159 206 61 219 0.68 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 2_27 - 753 UvrD-helicase PF00580.16 315 0.00025 14.3 3.6 2 3 6.4e-05 0.013 8.7 0.0 12 38 232 258 226 264 0.84 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 2_27 - 753 UvrD-helicase PF00580.16 315 0.00025 14.3 3.6 3 3 0.0033 0.67 3.0 1.3 97 169 379 506 308 609 0.61 # 27382 # 29640 # 1 # ID=2_27;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.357 3_5 - 231 AAA_25 PF13481.1 194 0.00021 14.6 0.0 1 1 7.8e-06 0.00053 13.3 0.0 36 149 50 162 38 177 0.65 # 3020 # 3712 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.417 1_24 - 228 AAA_25 PF13481.1 194 0.00081 12.7 0.0 1 1 2.7e-05 0.0018 11.6 0.0 30 50 28 48 15 69 0.88 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_24 - 831 AAA_25 PF13481.1 194 0.0012 12.1 0.0 1 1 6e-05 0.0041 10.4 0.0 31 157 461 591 451 608 0.56 # 22185 # 24677 # 1 # ID=2_24;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.375 1_24 - 228 AAA_28 PF13521.1 163 0.00064 13.6 0.0 1 1 6.9e-06 0.0014 12.5 0.0 2 20 34 52 33 65 0.88 # 29321 # 30004 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.357 2_47 - 717 AAA_5 PF07728.9 139 0.00014 15.5 0.1 1 2 4.4e-05 0.009 9.7 0.0 3 46 512 559 510 580 0.69 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_47 - 717 AAA_5 PF07728.9 139 0.00014 15.5 0.1 2 2 0.0056 1.1 2.8 0.0 28 77 594 649 586 682 0.75 # 42487 # 44637 # 1 # ID=2_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.351 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/373e870c-0d6a-4ceb-96a7-fafb84cff629 # Target file: checkm_output/bins/pGCA_002163735.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002163735.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/373e870c-0d6a-4ceb-96a7-fafb84cff629 checkm_output/bins/pGCA_002163735.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:48:54 2020 # [ok]