# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 474 SMC_N PF02463.14 220 3.1e-06 15.9 8.8 1 2 0.00071 0.0057 5.2 0.3 12 61 5 57 2 127 0.79 # 1971 # 3392 # 1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=TAA;rbs_spacer=3bp;gc_cont=0.280 1_3 - 474 SMC_N PF02463.14 220 3.1e-06 15.9 8.8 2 2 2e-06 1.6e-05 13.5 3.0 135 197 290 452 203 468 0.70 # 1971 # 3392 # 1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=TAA;rbs_spacer=3bp;gc_cont=0.280 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/44a43113-8fea-4dce-9b61-58c049c9b508 # Target file: checkm_output/bins/pGCA_002109405.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002109405.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/44a43113-8fea-4dce-9b61-58c049c9b508 checkm_output/bins/pGCA_002109405.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:48:27 2020 # [ok]