# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_6 - 225 AAA_17 PF13207.1 121 3.2e-06 18.2 1.1 1 1 3.1e-07 4.6e-06 17.7 1.1 23 113 24 122 20 205 0.85 # 6725 # 7399 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 1_8 - 344 tRNA-synt_1b PF00579.20 292 5.4e-73 235.8 0.9 1 1 4.5e-74 6.7e-73 235.5 0.9 7 291 13 295 8 296 0.97 # 8959 # 9990 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.305 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/4f57afd9-0c50-4bf5-b994-4fdca5f4223a # Target file: checkm_output/bins/pGCA_002085695.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002085695.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4f57afd9-0c50-4bf5-b994-4fdca5f4223a checkm_output/bins/pGCA_002085695.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:48:20 2020 # [ok]