# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_29 - 450 Saccharop_dh PF03435.13 386 0.0011 11.8 0.0 1 2 2.7e-05 0.0051 9.6 0.0 2 33 7 36 7 39 0.90 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 Saccharop_dh PF03435.13 386 0.0011 11.8 0.0 2 2 0.033 6.4 -0.6 0.0 2 38 163 197 162 213 0.82 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 6_1 - 380 Rad17 PF03215.10 519 3.4e-07 23.0 0.0 1 1 5.2e-09 4.9e-07 22.5 0.0 33 123 19 111 9 155 0.78 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 Rad17 PF03215.10 519 4.7e-05 16.0 0.0 1 1 7.1e-07 6.8e-05 15.5 0.0 43 72 29 58 17 127 0.63 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 7_7 - 300 MipZ PF09140.6 261 2.5e-12 40.2 0.1 1 2 2.9e-10 1.8e-08 27.5 0.0 2 102 4 116 3 129 0.65 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 7_7 - 300 MipZ PF09140.6 261 2.5e-12 40.2 0.1 2 2 4.2e-05 0.0027 10.6 0.0 79 126 134 181 120 186 0.85 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 3_3 - 294 MipZ PF09140.6 261 2.8e-11 36.8 0.2 1 2 9.9e-09 6.3e-07 22.5 0.0 3 52 13 61 11 86 0.84 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 3_3 - 294 MipZ PF09140.6 261 2.8e-11 36.8 0.2 2 2 2e-05 0.0013 11.6 0.0 79 126 128 175 102 185 0.84 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 8_8 - 263 MipZ PF09140.6 261 2.2e-07 24.0 0.0 1 1 2e-07 1.3e-05 18.2 0.0 3 55 5 56 3 160 0.64 # 4326 # 5114 # 1 # ID=8_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.370 8_8 - 263 YhjQ PF06564.7 244 7.8e-14 45.4 0.0 1 1 1.6e-15 1e-13 45.0 0.0 6 153 7 156 2 199 0.82 # 4326 # 5114 # 1 # ID=8_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.370 7_7 - 300 YhjQ PF06564.7 244 3.2e-11 36.8 0.1 1 2 7.1e-07 4.5e-05 16.7 0.0 8 41 9 42 1 66 0.83 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 7_7 - 300 YhjQ PF06564.7 244 3.2e-11 36.8 0.1 2 2 2.5e-07 1.6e-05 18.2 0.0 66 151 100 187 95 201 0.81 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 3_3 - 294 YhjQ PF06564.7 244 6.5e-08 26.0 0.0 1 1 2.2e-08 1.4e-06 21.6 0.0 8 55 17 64 11 185 0.55 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 1_29 - 450 3HCDH_N PF02737.13 180 7e-08 26.1 0.0 1 2 0.00031 0.059 6.8 0.0 4 34 8 38 5 46 0.93 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 3HCDH_N PF02737.13 180 7e-08 26.1 0.0 2 2 2.2e-07 4.1e-05 17.1 0.0 2 49 162 209 161 250 0.83 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 GIDA PF01134.17 392 7.1e-06 18.9 0.1 1 3 4e-06 0.00075 12.2 0.0 3 48 7 58 5 88 0.84 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 GIDA PF01134.17 392 7.1e-06 18.9 0.1 2 3 0.0022 0.41 3.2 0.0 3 33 163 193 161 206 0.90 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 GIDA PF01134.17 392 7.1e-06 18.9 0.1 3 3 0.074 14 -1.9 0.0 343 366 278 300 215 302 0.60 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_10 - 140 SSB PF00436.20 104 1.3e-09 31.8 0.1 1 1 8.7e-12 1.7e-09 31.4 0.1 1 99 4 96 4 101 0.90 # 5116 # 5535 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.452 5_2 - 264 Methyltransf_18 PF12847.2 112 0.0015 13.0 0.0 1 1 1.9e-05 0.0035 11.7 0.0 12 108 94 204 82 208 0.61 # 1230 # 2021 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.386 1_29 - 450 Pyr_redox_2 PF07992.9 201 5.5e-38 124.6 1.6 1 1 1.6e-38 3e-36 119.0 1.6 3 200 7 302 5 303 0.94 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 6_1 - 380 NB-ARC PF00931.17 287 0.0013 11.4 0.0 1 1 1.1e-05 0.0021 10.7 0.0 17 37 29 49 15 63 0.84 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 AAA_22 PF13401.1 131 2.1e-05 18.5 0.0 1 1 7.1e-07 4.5e-05 17.4 0.0 3 29 30 56 28 119 0.86 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 6_1 - 380 AAA_22 PF13401.1 131 2.2e-05 18.4 0.0 1 1 6e-07 3.8e-05 17.7 0.0 3 25 30 52 26 161 0.84 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 1_16 - 643 AAA_22 PF13401.1 131 6.2e-05 17.0 1.8 1 2 0.0035 0.22 5.5 0.0 6 25 241 260 236 291 0.85 # 11561 # 13489 # 1 # ID=1_16;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_16 - 643 AAA_22 PF13401.1 131 6.2e-05 17.0 1.8 2 2 0.00021 0.013 9.4 0.1 72 131 480 544 418 544 0.73 # 11561 # 13489 # 1 # ID=1_16;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.455 7_7 - 300 ATP_bind_1 PF03029.12 238 1.4e-06 21.8 0.9 1 2 0.00018 0.034 7.5 0.0 6 37 13 44 8 54 0.92 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 7_7 - 300 ATP_bind_1 PF03029.12 238 1.4e-06 21.8 0.9 2 2 3.3e-06 0.00063 13.1 0.1 73 191 136 250 108 293 0.75 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 3_3 - 294 SRP54 PF00448.17 196 0.00098 12.4 0.1 1 2 0.00041 0.039 7.2 0.1 11 38 21 48 12 54 0.93 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 3_3 - 294 SRP54 PF00448.17 196 0.00098 12.4 0.1 2 2 0.01 0.99 2.6 0.0 66 91 131 155 115 183 0.77 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 7_7 - 300 SRP54 PF00448.17 196 0.0011 12.2 0.1 1 1 2.5e-05 0.0024 11.1 0.1 11 40 13 42 4 67 0.89 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 6_1 - 380 AAA_15 PF13175.1 415 2.5e-06 20.6 0.3 1 2 4.9e-05 0.0046 9.8 0.2 9 50 10 62 2 127 0.64 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 6_1 - 380 AAA_15 PF13175.1 415 2.5e-06 20.6 0.3 2 2 8.9e-05 0.0084 8.9 0.0 365 411 155 195 103 197 0.89 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 AAA_15 PF13175.1 415 1.6e-05 17.9 0.0 1 2 0.0027 0.25 4.0 0.0 22 43 8 60 2 101 0.67 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 4_15 - 376 AAA_15 PF13175.1 415 1.6e-05 17.9 0.0 2 2 1.2e-05 0.0011 11.8 0.0 372 411 156 195 146 197 0.93 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 1_29 - 450 NAD_binding_7 PF13241.1 103 1.1e-05 19.5 0.0 1 2 0.001 0.2 5.8 0.0 6 39 2 35 1 116 0.82 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 NAD_binding_7 PF13241.1 103 1.1e-05 19.5 0.0 2 2 2.2e-05 0.0042 11.2 0.0 7 45 159 222 153 274 0.64 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_10 - 293 N6_N4_Mtase PF01555.13 231 2e-05 18.0 0.6 1 1 1.8e-07 3.4e-05 17.2 0.6 3 152 85 252 84 286 0.69 # 8434 # 9312 # -1 # ID=5_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.445 6_1 - 380 AAA_17 PF13207.1 121 8.3e-05 17.2 0.4 1 1 7.4e-06 0.00047 14.8 0.2 2 17 34 49 33 49 0.91 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 AAA_17 PF13207.1 121 0.00011 16.8 0.2 1 1 4.6e-06 0.00029 15.5 0.2 2 22 34 54 33 205 0.77 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 3_3 - 294 AAA_17 PF13207.1 121 0.00054 14.6 0.0 1 1 2.1e-05 0.0013 13.4 0.0 9 33 21 49 20 154 0.80 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 6_1 - 380 AAA_21 PF13304.1 303 2.2e-11 38.0 0.1 1 1 1.1e-11 1e-09 32.5 0.0 1 298 33 195 33 200 0.90 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 AAA_21 PF13304.1 303 3.4e-11 37.4 0.0 1 1 1.2e-11 1.1e-09 32.4 0.0 1 298 33 195 33 200 0.94 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 5_2 - 264 ADH_zinc_N_2 PF13602.1 127 3.3e-05 18.6 0.0 1 1 2.8e-07 5.3e-05 18.0 0.0 14 126 140 258 105 259 0.66 # 1230 # 2021 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.386 6_1 - 380 Miro PF08477.8 119 0.00029 15.2 0.0 1 1 8e-06 0.0015 12.8 0.0 2 32 34 63 34 99 0.81 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 3_3 - 294 MobB PF03205.9 140 6.2e-05 16.5 0.1 1 1 2.2e-06 0.00021 14.8 0.0 9 102 20 113 13 151 0.75 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 4_15 - 376 MobB PF03205.9 140 0.0013 12.3 0.0 1 1 3.7e-05 0.0035 10.8 0.0 3 21 34 52 32 56 0.91 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 3_3 - 294 LpxK PF02606.9 326 0.00062 12.5 0.0 1 1 5.1e-06 0.00097 11.9 0.0 42 72 17 46 3 70 0.81 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 5_2 - 264 ADH_zinc_N PF00107.21 130 4.8e-24 78.2 0.0 1 1 3.6e-26 6.9e-24 77.7 0.0 1 117 93 210 93 221 0.96 # 1230 # 2021 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.386 8_8 - 263 ArsA_ATPase PF02374.10 305 2.8e-13 43.3 0.1 1 1 5.6e-14 3.6e-12 39.7 0.0 2 141 4 135 3 137 0.71 # 4326 # 5114 # 1 # ID=8_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.370 3_3 - 294 ArsA_ATPase PF02374.10 305 1.2e-12 41.3 0.2 1 3 8.6e-12 5.5e-10 32.5 0.0 7 57 17 68 11 91 0.86 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 3_3 - 294 ArsA_ATPase PF02374.10 305 1.2e-12 41.3 0.2 2 3 0.0029 0.19 4.5 0.0 124 137 145 158 124 171 0.81 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 3_3 - 294 ArsA_ATPase PF02374.10 305 1.2e-12 41.3 0.2 3 3 0.044 2.8 0.6 0.0 91 131 204 244 182 246 0.79 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 7_7 - 300 ArsA_ATPase PF02374.10 305 2.4e-12 40.3 0.4 1 1 3.1e-13 2e-11 37.2 0.4 7 59 7 61 1 166 0.74 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 1_29 - 450 NAD_binding_8 PF13450.1 68 1.5e-07 25.2 0.3 1 2 2.8e-05 0.0053 10.6 0.0 1 30 8 37 8 46 0.87 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 NAD_binding_8 PF13450.1 68 1.5e-07 25.2 0.3 2 2 1.1e-05 0.0021 11.9 0.0 1 31 164 194 164 195 0.97 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 F420_oxidored PF03807.12 96 3e-05 18.2 0.1 1 2 1.5e-05 0.0029 11.9 0.0 4 36 8 36 5 42 0.88 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 F420_oxidored PF03807.12 96 3e-05 18.2 0.1 2 2 0.0068 1.3 3.4 0.0 1 30 161 187 161 236 0.79 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 FAD_binding_3 PF01494.14 356 3.7e-05 16.7 0.2 1 3 0.00074 0.07 5.9 0.0 5 35 7 37 3 42 0.89 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 FAD_binding_3 PF01494.14 356 3.7e-05 16.7 0.2 2 3 0.001 0.099 5.4 0.0 5 35 163 193 161 205 0.92 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 FAD_binding_3 PF01494.14 356 3.7e-05 16.7 0.2 3 3 0.016 1.5 1.5 0.1 118 162 207 251 199 256 0.84 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 5_2 - 264 FAD_binding_3 PF01494.14 356 0.0001 15.2 0.0 1 1 1.7e-06 0.00016 14.6 0.0 3 35 85 117 84 122 0.93 # 1230 # 2021 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.386 4_15 - 376 SMC_N PF02463.14 220 1.5e-09 31.2 0.0 1 1 2.9e-11 2.7e-09 30.3 0.0 23 211 30 209 20 216 0.77 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 6_1 - 380 SMC_N PF02463.14 220 1.3e-07 24.9 0.4 1 1 1.8e-08 1.7e-06 21.2 0.4 23 216 30 211 12 215 0.69 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 8_8 - 263 VirC1 PF07015.6 231 9e-06 18.7 0.2 1 2 0.00011 0.0069 9.3 0.0 4 45 5 46 2 56 0.83 # 4326 # 5114 # 1 # ID=8_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.370 8_8 - 263 VirC1 PF07015.6 231 9e-06 18.7 0.2 2 2 0.00033 0.021 7.7 0.1 83 133 120 170 108 231 0.90 # 4326 # 5114 # 1 # ID=8_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.370 7_7 - 300 VirC1 PF07015.6 231 2.1e-05 17.5 0.1 1 1 1.5e-06 9.3e-05 15.4 0.0 2 39 3 40 2 47 0.91 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 3_3 - 294 VirC1 PF07015.6 231 8.2e-05 15.6 0.0 1 1 2.3e-06 0.00015 14.7 0.0 4 54 13 63 11 88 0.85 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 7_7 - 300 Fer4_NifH PF00142.13 273 5.2e-09 29.4 0.1 1 2 9.1e-09 5.8e-07 22.7 0.0 8 52 11 55 4 86 0.88 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 7_7 - 300 Fer4_NifH PF00142.13 273 5.2e-09 29.4 0.1 2 2 0.004 0.26 4.2 0.0 203 253 110 158 90 181 0.77 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 8_8 - 263 Fer4_NifH PF00142.13 273 1.1e-07 25.1 0.0 1 1 3.2e-09 2.1e-07 24.2 0.0 2 50 4 53 3 70 0.90 # 4326 # 5114 # 1 # ID=8_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.370 3_3 - 294 Fer4_NifH PF00142.13 273 2.2e-06 20.8 0.0 1 1 8.3e-08 5.3e-06 19.6 0.0 7 49 18 60 13 77 0.88 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 6_1 - 380 Arch_ATPase PF01637.13 234 7.2e-05 16.3 0.0 1 1 6.5e-07 0.00012 15.6 0.0 13 70 26 80 18 136 0.63 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 6_1 - 380 AAA_16 PF13191.1 185 6e-06 20.2 0.0 1 1 1e-07 9.7e-06 19.5 0.0 22 44 29 51 5 145 0.84 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 AAA_16 PF13191.1 185 0.00027 14.7 0.0 1 1 5.2e-06 0.00049 13.9 0.0 24 44 31 51 20 154 0.85 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 6_1 - 380 AAA_23 PF13476.1 202 3.5e-06 21.2 0.4 1 1 1.1e-07 1.1e-05 19.7 0.4 11 40 22 52 3 185 0.92 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 AAA_23 PF13476.1 202 3.2e-05 18.1 0.0 1 1 6.8e-07 6.4e-05 17.1 0.0 15 39 22 51 10 54 0.81 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 4_15 - 376 AAA_18 PF13238.1 129 3.4e-05 18.0 0.0 1 1 1.8e-06 0.00011 16.3 0.0 1 55 34 114 34 191 0.79 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 3_3 - 294 AAA_18 PF13238.1 129 0.00097 13.3 0.0 1 1 3e-05 0.0019 12.3 0.0 8 39 21 57 19 159 0.79 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 6_1 - 380 AAA_18 PF13238.1 129 0.0011 13.1 0.0 1 1 6.5e-05 0.0041 11.3 0.0 1 18 34 51 34 134 0.80 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 7_7 - 300 CbiA PF01656.18 195 1.3e-37 122.9 0.1 1 1 2.5e-39 1.6e-37 122.6 0.1 1 192 5 254 5 257 0.80 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 3_3 - 294 CbiA PF01656.18 195 3.2e-37 121.6 0.1 1 1 6.4e-39 4e-37 121.3 0.1 1 193 13 250 13 252 0.80 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 8_8 - 263 CbiA PF01656.18 195 2.4e-29 95.9 0.1 1 1 4.7e-31 3e-29 95.6 0.1 3 191 7 219 5 223 0.80 # 4326 # 5114 # 1 # ID=8_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.370 6_1 - 380 AAA_14 PF13173.1 128 0.00027 14.7 0.0 1 1 3.6e-06 0.00068 13.4 0.0 2 42 31 69 30 114 0.73 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 1_29 - 450 HI0933_like PF03486.9 409 1.6e-07 23.8 0.1 1 3 6e-05 0.011 7.9 0.0 2 35 5 38 4 42 0.93 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 HI0933_like PF03486.9 409 1.6e-07 23.8 0.1 2 3 0.00042 0.08 5.1 0.0 2 36 161 195 160 197 0.91 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 HI0933_like PF03486.9 409 1.6e-07 23.8 0.1 3 3 8.9e-05 0.017 7.3 0.0 111 164 202 257 196 284 0.79 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 6_1 - 380 AAA_29 PF13555.1 62 1.2e-05 18.6 0.0 1 1 4.7e-07 3e-05 17.3 0.0 15 40 24 48 18 53 0.83 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 AAA_29 PF13555.1 62 0.0003 14.1 0.0 1 1 1e-05 0.00064 13.1 0.0 18 40 25 48 18 52 0.74 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 1_16 - 643 AAA_29 PF13555.1 62 0.0012 12.2 0.0 1 1 5.8e-05 0.0037 10.7 0.0 24 39 240 255 225 259 0.77 # 11561 # 13489 # 1 # ID=1_16;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.455 4_15 - 376 AAA PF00004.24 132 0.00011 16.2 0.0 1 1 9.9e-07 0.00019 15.5 0.0 1 52 34 85 34 119 0.88 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 1_29 - 450 Thi4 PF01946.12 230 6.1e-05 16.0 0.0 1 2 2.3e-06 0.00044 13.2 0.0 21 57 7 43 3 63 0.88 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 Thi4 PF01946.12 230 6.1e-05 16.0 0.0 2 2 0.045 8.5 -0.8 0.0 20 49 162 191 146 194 0.85 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 Pyr_redox_3 PF13738.1 203 4.1e-12 40.4 0.0 1 2 7.2e-11 1.4e-08 28.9 0.0 1 198 7 190 7 195 0.75 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 Pyr_redox_3 PF13738.1 203 4.1e-12 40.4 0.0 2 2 0.00022 0.041 7.7 0.0 90 157 209 282 198 301 0.76 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 6_1 - 380 MMR_HSR1 PF01926.18 116 0.001 12.9 0.0 1 1 1.1e-05 0.002 11.9 0.0 2 21 34 53 33 127 0.87 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 6_1 - 380 DUF258 PF03193.11 161 1.1e-06 21.7 0.0 1 1 2e-08 1.9e-06 21.0 0.0 21 68 16 64 1 71 0.80 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 DUF258 PF03193.11 161 8.7e-06 18.8 0.0 1 1 1.7e-07 1.6e-05 17.9 0.0 31 67 26 63 3 70 0.78 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 1_12 - 819 TraG-D_C PF12696.2 128 2.2e-31 102.2 0.0 1 1 3e-33 5.7e-31 100.9 0.0 1 127 454 572 454 573 0.86 # 6149 # 8605 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_29 - 450 NAD_binding_2 PF03446.10 163 5.4e-05 16.9 0.2 1 2 0.00026 0.05 7.2 0.0 6 35 8 37 5 44 0.93 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 NAD_binding_2 PF03446.10 163 5.4e-05 16.9 0.2 2 2 0.00034 0.065 6.9 0.1 3 38 161 196 159 283 0.71 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 7_7 - 300 AAA_31 PF13614.1 157 3e-15 50.3 1.0 1 1 2.3e-15 1.5e-13 44.8 1.0 9 154 11 189 3 191 0.78 # 4542 # 5441 # -1 # ID=7_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.392 8_8 - 263 AAA_31 PF13614.1 157 4.8e-12 39.9 0.1 1 1 2.4e-13 1.5e-11 38.3 0.1 3 151 5 153 3 157 0.74 # 4326 # 5114 # 1 # ID=8_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.370 3_3 - 294 AAA_31 PF13614.1 157 2.2e-09 31.3 0.0 1 2 3.7e-08 2.4e-06 21.4 0.0 3 53 13 62 12 112 0.81 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 3_3 - 294 AAA_31 PF13614.1 157 2.2e-09 31.3 0.0 2 2 0.00058 0.037 7.8 0.0 108 131 138 161 130 185 0.77 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 4_15 - 376 AAA_33 PF13671.1 143 4.6e-06 20.4 0.1 1 2 1.4e-06 0.00013 15.7 0.2 2 21 34 53 33 211 0.80 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 4_15 - 376 AAA_33 PF13671.1 143 4.6e-06 20.4 0.1 2 2 0.043 4.1 1.1 0.0 101 125 320 345 308 358 0.76 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 6_1 - 380 AAA_33 PF13671.1 143 0.00093 12.9 0.1 1 1 4.4e-05 0.0042 10.8 0.0 2 17 34 49 33 83 0.91 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 1_29 - 450 NAD_Gly3P_dh_N PF01210.18 157 9.3e-07 22.5 0.0 1 2 6.3e-06 0.0012 12.4 0.0 4 33 8 37 5 83 0.89 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 NAD_Gly3P_dh_N PF01210.18 157 9.3e-07 22.5 0.0 2 2 0.00017 0.032 7.8 0.0 2 36 162 196 161 225 0.90 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 2-Hacid_dh_C PF02826.14 178 1.9e-09 30.7 0.1 1 2 8.3e-05 0.016 8.2 0.1 41 70 8 37 3 47 0.92 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 2-Hacid_dh_C PF02826.14 178 1.9e-09 30.7 0.1 2 2 3e-08 5.7e-06 19.4 0.0 27 73 150 196 142 213 0.80 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 XdhC_C PF13478.1 136 1.2e-05 19.5 0.0 1 2 0.0045 0.85 3.7 0.0 2 35 7 40 7 75 0.85 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 XdhC_C PF13478.1 136 1.2e-05 19.5 0.0 2 2 4.8e-06 0.00092 13.4 0.0 1 58 162 221 162 232 0.83 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 7_5 - 325 RRM_6 PF14259.1 70 0.00098 12.9 0.0 1 2 0.041 7.9 0.4 0.0 18 47 23 56 21 67 0.66 # 2669 # 3643 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.476 7_5 - 325 RRM_6 PF14259.1 70 0.00098 12.9 0.0 2 2 7.6e-05 0.014 9.2 0.0 26 57 219 250 189 260 0.74 # 2669 # 3643 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.476 1_29 - 450 ApbA PF02558.11 151 2.3e-06 20.9 0.5 1 2 2.3e-05 0.0043 10.3 0.0 3 31 8 36 7 45 0.93 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 ApbA PF02558.11 151 2.3e-06 20.9 0.5 2 2 0.00013 0.025 7.8 0.1 2 75 163 255 162 261 0.75 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 6_1 - 380 ABC_tran PF00005.22 137 6.2e-37 120.8 0.0 1 1 1.1e-38 1.1e-36 120.0 0.0 1 136 21 163 21 164 0.97 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 ABC_tran PF00005.22 137 1.2e-31 103.6 0.0 1 1 3e-33 2.8e-31 102.5 0.0 4 136 24 163 21 164 0.93 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 1_29 - 450 K_oxygenase PF13434.1 341 2.4e-09 30.3 0.0 1 3 0.058 11 -1.5 0.0 6 37 7 37 3 39 0.77 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 K_oxygenase PF13434.1 341 2.4e-09 30.3 0.0 2 3 2.6e-08 4.9e-06 19.4 0.0 130 205 105 174 94 209 0.81 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 K_oxygenase PF13434.1 341 2.4e-09 30.3 0.0 3 3 0.00011 0.021 7.5 0.1 292 338 213 256 203 259 0.81 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 4_15 - 376 TIGR03263 TIGR03263 180 0.0012 12.0 0.3 1 2 6.3e-05 0.012 8.7 0.0 3 22 33 52 31 64 0.84 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 4_15 - 376 TIGR03263 TIGR03263 180 0.0012 12.0 0.3 2 2 0.027 5.2 0.1 0.0 115 156 155 196 145 219 0.76 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 2_12 - 645 Cons_hypoth95 PF03602.10 183 1.8e-05 18.0 0.1 1 4 0.08 15 -1.3 0.0 39 57 21 40 16 41 0.77 # 8765 # 10699 # -1 # ID=2_12;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 2_12 - 645 Cons_hypoth95 PF03602.10 183 1.8e-05 18.0 0.1 2 4 0.0001 0.019 8.1 0.0 106 132 204 229 176 268 0.72 # 8765 # 10699 # -1 # ID=2_12;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 2_12 - 645 Cons_hypoth95 PF03602.10 183 1.8e-05 18.0 0.1 3 4 0.0038 0.72 3.0 0.0 45 59 394 408 386 428 0.76 # 8765 # 10699 # -1 # ID=2_12;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 2_12 - 645 Cons_hypoth95 PF03602.10 183 1.8e-05 18.0 0.1 4 4 0.013 2.4 1.3 0.0 116 125 545 554 511 562 0.84 # 8765 # 10699 # -1 # ID=2_12;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 1_29 - 450 UDPG_MGDP_dh_N PF03721.9 185 8.4e-09 28.8 0.9 1 2 0.016 3 1.0 0.0 5 33 8 36 5 39 0.90 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 UDPG_MGDP_dh_N PF03721.9 185 8.4e-09 28.8 0.9 2 2 2.5e-09 4.7e-07 23.1 0.9 2 85 161 256 160 290 0.66 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 NAD_binding_10 PF13460.1 183 0.0014 12.4 0.4 1 3 0.00056 0.11 6.3 0.0 3 34 8 38 7 45 0.89 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 NAD_binding_10 PF13460.1 183 0.0014 12.4 0.4 2 3 0.065 12 -0.4 0.1 2 35 163 195 162 214 0.72 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 NAD_binding_10 PF13460.1 183 0.0014 12.4 0.4 3 3 0.0077 1.5 2.6 0.1 11 74 203 267 200 296 0.66 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 4_15 - 376 TOBE PF03459.12 64 7.1e-07 23.1 0.0 1 2 0.0014 0.27 5.3 0.0 50 63 278 291 253 292 0.88 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 4_15 - 376 TOBE PF03459.12 64 7.1e-07 23.1 0.0 2 2 1.2e-06 0.00022 15.1 0.0 6 63 304 356 301 357 0.93 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 1_16 - 643 AAA_10 PF12846.2 304 2.1e-43 142.6 0.1 1 1 9.8e-45 3.7e-43 141.8 0.1 2 291 240 581 239 594 0.89 # 11561 # 13489 # 1 # ID=1_16;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_12 - 819 AAA_10 PF12846.2 304 8.5e-10 32.3 0.0 1 1 3.9e-11 1.5e-09 31.5 0.0 2 269 180 498 179 533 0.72 # 6149 # 8605 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.451 4_15 - 376 AAA_10 PF12846.2 304 0.00056 13.2 0.0 1 1 2.5e-05 0.00095 12.4 0.0 4 26 34 57 32 81 0.83 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 6_1 - 380 AAA_10 PF12846.2 304 0.00061 13.1 0.0 1 1 4.9e-05 0.0019 11.5 0.0 4 20 34 51 32 82 0.84 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 3_3 - 294 AAA_10 PF12846.2 304 0.00069 12.9 0.0 1 1 4e-05 0.0015 11.8 0.0 10 38 20 48 14 104 0.87 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 1_29 - 450 DAO PF01266.19 358 2.5e-06 20.4 1.2 1 3 3.8e-05 0.0072 9.0 0.0 3 32 7 37 5 93 0.89 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 DAO PF01266.19 358 2.5e-06 20.4 1.2 2 3 0.00068 0.13 4.9 0.2 2 31 162 191 161 196 0.85 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 DAO PF01266.19 358 2.5e-06 20.4 1.2 3 3 0.0012 0.22 4.1 0.1 150 201 203 257 198 401 0.76 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_16 - 643 Zot PF05707.7 193 1.1e-06 22.0 0.1 1 2 0.053 10 -0.7 0.0 4 16 243 255 242 273 0.75 # 11561 # 13489 # 1 # ID=1_16;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_16 - 643 Zot PF05707.7 193 1.1e-06 22.0 0.1 2 2 4.3e-08 8.2e-06 19.2 0.0 61 129 474 543 444 557 0.78 # 11561 # 13489 # 1 # ID=1_16;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.455 6_1 - 380 Adeno_IVa2 PF02456.10 370 0.0013 11.1 0.0 1 1 1.1e-05 0.0021 10.5 0.0 75 107 18 51 2 76 0.76 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 1_29 - 450 NAD_binding_9 PF13454.1 156 0.00021 14.9 2.4 1 3 0.00062 0.12 6.0 0.0 1 39 7 41 7 60 0.79 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 NAD_binding_9 PF13454.1 156 0.00021 14.9 2.4 2 3 0.039 7.4 0.1 0.1 1 34 163 191 163 197 0.71 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 NAD_binding_9 PF13454.1 156 0.00021 14.9 2.4 3 3 0.00032 0.061 6.9 0.1 112 155 212 257 201 258 0.71 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_12 - 819 DEAD PF00270.24 169 0.00023 14.5 0.0 1 1 2.9e-06 0.00055 13.3 0.0 12 46 176 233 166 317 0.73 # 6149 # 8605 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_29 - 450 Pyr_redox PF00070.22 80 2.7e-24 79.2 0.1 1 2 0.00054 0.1 6.9 0.0 3 34 7 38 5 43 0.92 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 Pyr_redox PF00070.22 80 2.7e-24 79.2 0.1 2 2 1.4e-23 2.6e-21 69.7 0.0 1 77 161 235 161 241 0.96 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_12 - 819 TrwB_AAD_bind PF10412.4 386 1.6e-23 76.7 0.0 1 2 9.8e-05 0.0093 8.3 0.0 16 124 180 306 168 338 0.65 # 6149 # 8605 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_12 - 819 TrwB_AAD_bind PF10412.4 386 1.6e-23 76.7 0.0 2 2 3.2e-22 3.1e-20 65.9 0.0 190 372 397 578 366 586 0.79 # 6149 # 8605 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_16 - 643 TrwB_AAD_bind PF10412.4 386 3e-05 16.6 0.0 1 1 5.7e-07 5.5e-05 15.7 0.0 11 57 235 281 228 296 0.89 # 11561 # 13489 # 1 # ID=1_16;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_12 - 819 T4SS-DNA_transf PF02534.9 469 1.3e-48 159.5 0.1 1 1 1.7e-50 3.3e-48 158.2 0.0 36 434 172 581 143 585 0.82 # 6149 # 8605 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_16 - 643 AAA_32 PF13654.1 509 0.00078 11.9 0.0 1 2 0.055 10 -1.7 0.0 182 203 137 158 75 184 0.76 # 11561 # 13489 # 1 # ID=1_16;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_16 - 643 AAA_32 PF13654.1 509 0.00078 11.9 0.0 2 2 1.7e-05 0.0032 9.9 0.0 27 56 236 266 230 274 0.84 # 11561 # 13489 # 1 # ID=1_16;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.455 2_12 - 645 MethyltransfD12 PF02086.10 260 6.5e-82 268.6 17.9 1 2 1.4e-51 2.6e-49 161.8 0.6 1 260 3 300 3 300 0.93 # 8765 # 10699 # -1 # ID=2_12;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 2_12 - 645 MethyltransfD12 PF02086.10 260 6.5e-82 268.6 17.9 2 2 2.7e-37 5.1e-35 114.9 6.5 1 256 373 622 373 626 0.90 # 8765 # 10699 # -1 # ID=2_12;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 3_3 - 294 ArgK PF03308.11 267 6.4e-05 15.6 0.1 1 1 1.2e-06 0.00023 13.8 0.0 38 72 20 54 10 60 0.91 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 4_15 - 376 RNA_helicase PF00910.17 107 0.00083 13.4 0.0 1 1 1.9e-05 0.0036 11.3 0.0 1 19 34 52 34 89 0.83 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 1_29 - 450 TrkA_N PF02254.13 116 5.8e-09 29.8 0.1 1 2 3e-07 5.6e-05 17.0 0.0 2 31 7 36 6 39 0.89 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 TrkA_N PF02254.13 116 5.8e-09 29.8 0.1 2 2 6.4e-05 0.012 9.4 0.0 2 52 163 213 162 215 0.90 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_29 - 450 AlaDh_PNT_C PF01262.16 168 4.2e-05 17.0 0.0 1 1 4.6e-07 8.7e-05 15.9 0.0 17 60 156 199 144 239 0.87 # 23950 # 25299 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_10 - 140 tRNA_anti-codon PF01336.20 75 0.00034 14.3 0.0 1 1 3.3e-06 0.00063 13.4 0.0 23 58 39 76 34 101 0.84 # 5116 # 5535 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.452 6_1 - 380 NACHT PF05729.7 166 0.0012 12.4 0.0 1 1 1.4e-05 0.0026 11.2 0.0 3 19 34 50 32 61 0.89 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 6_1 - 380 AAA_28 PF13521.1 163 0.0011 12.7 0.2 1 1 2.4e-05 0.0023 11.7 0.2 2 19 34 51 33 62 0.87 # 168 # 1307 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.384 4_15 - 376 AAA_28 PF13521.1 163 0.0012 12.7 0.0 1 1 2.1e-05 0.002 11.9 0.0 2 20 34 52 33 118 0.90 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 4_15 - 376 TOBE_2 PF08402.5 75 1.4e-07 25.2 0.0 1 1 1.8e-09 3.4e-07 24.0 0.0 2 75 284 358 283 358 0.85 # 10839 # 11966 # -1 # ID=4_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.598 3_3 - 294 APS_kinase PF01583.15 157 0.00048 13.6 0.0 1 1 4.5e-06 0.00085 12.8 0.0 11 57 20 65 9 84 0.84 # 1506 # 2387 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.422 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/c4fc5536-d5bd-41c5-97c6-b639a6749b59 # Target file: checkm_output/bins/pGCA_002079285.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002079285.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c4fc5536-d5bd-41c5-97c6-b639a6749b59 checkm_output/bins/pGCA_002079285.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:48:22 2020 # [ok]