# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 7_6 - 400 ThiI PF02568.9 197 0.0006 12.6 0.1 1 1 1.1e-05 0.0015 11.3 0.1 131 155 86 111 83 114 0.92 # 4189 # 5388 # -1 # ID=7_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.326 2_3 - 270 Methyltransf_32 PF13679.1 141 0.00042 13.3 0.0 1 2 0.0028 0.38 3.8 0.0 32 77 11 56 4 97 0.84 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 2_3 - 270 Methyltransf_32 PF13679.1 141 0.00042 13.3 0.0 2 2 0.00022 0.03 7.3 0.0 23 50 169 195 158 224 0.79 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_2 - 339 cobW PF02492.14 178 0.00079 12.2 0.3 1 1 3.3e-05 0.0044 9.8 0.3 2 121 38 170 37 205 0.61 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 2_6 - 223 Saccharop_dh PF03435.13 386 0.0006 12.1 0.0 1 1 6.9e-06 0.00092 11.5 0.0 1 43 10 50 10 87 0.84 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 5_2 - 339 ABC_ATPase PF09818.4 448 0.0001 14.3 1.6 1 2 0.0001 0.0068 8.3 0.0 240 264 31 56 11 61 0.89 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 ABC_ATPase PF09818.4 448 0.0001 14.3 1.6 2 2 0.0016 0.11 4.3 0.4 322 413 156 232 141 257 0.68 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 1_15 - 716 ABC_ATPase PF09818.4 448 0.00026 12.9 2.8 1 2 0.031 2.1 0.1 0.1 247 262 511 526 502 530 0.81 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 1_15 - 716 ABC_ATPase PF09818.4 448 0.00026 12.9 2.8 2 2 6.8e-06 0.00046 12.1 0.7 293 379 589 675 581 696 0.84 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_2 - 339 IstB_IS21 PF01695.12 178 0.00061 12.6 0.0 1 1 1.1e-05 0.0015 11.3 0.0 44 67 33 56 23 61 0.90 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 2_3 - 270 MipZ PF09140.6 261 5.1e-12 38.7 0.0 1 1 1.7e-11 7.7e-10 31.5 0.0 3 132 4 155 2 177 0.66 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 11_1 - 283 MipZ PF09140.6 261 9.8e-11 34.5 0.1 1 2 2.5e-09 1.1e-07 24.5 0.1 2 51 19 68 18 95 0.83 # 425 # 1273 # 1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.325 11_1 - 283 MipZ PF09140.6 261 9.8e-11 34.5 0.1 2 2 0.00026 0.011 8.0 0.0 77 125 121 169 100 181 0.81 # 425 # 1273 # 1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.325 3_15 - 253 MipZ PF09140.6 261 7.4e-10 31.6 0.6 1 2 5.8e-07 2.6e-05 16.7 0.1 3 59 4 60 2 69 0.88 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 3_15 - 253 MipZ PF09140.6 261 7.4e-10 31.6 0.6 2 2 5.1e-06 0.00023 13.6 0.1 36 129 65 153 58 159 0.83 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 2_3 - 270 YhjQ PF06564.7 244 7.2e-12 38.4 0.0 1 1 2.4e-13 1.1e-11 37.9 0.0 1 150 1 154 1 200 0.78 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 11_1 - 283 YhjQ PF06564.7 244 9.3e-09 28.3 0.0 1 1 4e-10 1.8e-08 27.3 0.0 10 149 26 174 18 181 0.75 # 425 # 1273 # 1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.325 3_15 - 253 YhjQ PF06564.7 244 8.9e-06 18.5 0.0 1 1 3e-07 1.3e-05 17.9 0.0 1 150 1 155 1 179 0.79 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 2_6 - 223 3HCDH_N PF02737.13 180 0.00021 14.3 0.0 1 1 2.5e-06 0.00034 13.6 0.0 2 45 10 53 9 70 0.89 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 1_15 - 716 DUF87 PF01935.12 229 0.00021 14.5 0.7 1 2 1.5e-06 0.00021 14.5 0.7 24 45 509 530 494 539 0.87 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 1_15 - 716 DUF87 PF01935.12 229 0.00021 14.5 0.7 2 2 0.067 8.9 -0.7 0.3 112 206 579 669 570 689 0.65 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_2 - 339 NB-ARC PF00931.17 287 0.00013 14.2 0.1 1 1 8e-06 0.00036 12.7 0.0 20 40 37 57 24 69 0.86 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 1_15 - 716 NB-ARC PF00931.17 287 0.00015 14.0 0.1 1 1 6.1e-06 0.00027 13.1 0.1 17 42 506 531 495 538 0.77 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_3 - 320 NB-ARC PF00931.17 287 0.00085 11.5 0.0 1 1 2.9e-05 0.0013 10.9 0.0 19 44 41 66 31 138 0.88 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 5_2 - 339 AAA_22 PF13401.1 131 6.3e-08 26.2 0.8 1 1 4.1e-08 1.8e-06 21.4 0.8 4 123 36 214 33 220 0.71 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 1_15 - 716 AAA_22 PF13401.1 131 5.2e-06 20.0 1.1 1 1 1.6e-06 7.2e-05 16.3 1.1 7 111 511 665 505 681 0.63 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_3 - 320 AAA_22 PF13401.1 131 0.00016 15.2 1.7 1 1 9e-05 0.004 10.6 1.7 9 123 46 212 39 221 0.60 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_3 - 270 ATP_bind_1 PF03029.12 238 4.6e-05 16.3 0.1 1 1 4.8e-06 0.00032 13.6 0.1 6 99 12 130 10 137 0.67 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 1_15 - 716 ATP_bind_1 PF03029.12 238 0.0006 12.7 0.2 1 1 1.9e-05 0.0013 11.6 0.2 1 22 513 534 513 541 0.88 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_3 - 320 PRK PF00485.13 194 0.0001 15.2 0.2 1 1 1.9e-06 0.00025 14.0 0.0 2 81 44 124 43 140 0.80 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_3 - 270 SRP54 PF00448.17 196 2.1e-05 17.4 0.7 1 1 9.7e-07 6.5e-05 15.7 0.1 10 40 11 41 1 46 0.84 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 3_15 - 253 SRP54 PF00448.17 196 0.00025 13.8 2.8 1 2 2.7e-05 0.0018 11.0 0.1 11 43 12 44 2 63 0.88 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 3_15 - 253 SRP54 PF00448.17 196 0.00025 13.8 2.8 2 2 0.01 0.68 2.6 0.0 46 92 82 131 66 135 0.68 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 5_2 - 339 AAA_15 PF13175.1 415 4.1e-09 29.2 0.1 1 2 9.2e-05 0.0062 8.9 0.0 17 56 30 70 14 132 0.75 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 AAA_15 PF13175.1 415 4.1e-09 29.2 0.1 2 2 1.1e-07 7.1e-06 18.5 0.0 361 411 172 216 154 220 0.81 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 320 AAA_15 PF13175.1 415 1.3e-05 17.7 0.6 1 2 1.1e-05 0.00076 11.9 0.9 27 99 46 132 6 141 0.83 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 5_3 - 320 AAA_15 PF13175.1 415 1.3e-05 17.7 0.6 2 2 0.0046 0.31 3.3 0.0 370 410 173 213 162 218 0.81 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_6 - 223 NAD_binding_7 PF13241.1 103 1.6e-05 18.4 0.1 1 1 2.6e-07 3.4e-05 17.4 0.1 6 69 6 80 3 115 0.69 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 1_15 - 716 AAA_17 PF13207.1 121 1.1e-05 19.5 0.2 1 1 1.9e-06 8.6e-05 16.7 0.1 3 22 512 531 510 667 0.75 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_2 - 339 AAA_17 PF13207.1 121 0.0001 16.4 0.1 1 1 6.1e-06 0.00027 15.1 0.1 1 20 38 57 38 82 0.90 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 320 AAA_17 PF13207.1 121 0.012 9.8 3.9 1 1 0.001 0.045 7.9 3.9 2 19 44 61 43 300 0.79 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 5_2 - 339 AAA_21 PF13304.1 303 8.9e-16 51.9 0.1 1 2 1.1e-05 0.00048 13.4 0.0 2 25 39 64 38 89 0.76 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 AAA_21 PF13304.1 303 8.9e-16 51.9 0.1 2 2 9e-13 4e-11 36.6 0.0 227 300 147 218 88 221 0.84 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 320 AAA_21 PF13304.1 303 1.2e-12 41.7 2.8 1 1 2.9e-13 1.3e-11 38.3 0.9 3 299 45 215 44 219 0.95 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_15 - 716 AAA_21 PF13304.1 303 3.1e-08 27.2 7.9 1 2 3.7e-06 0.00016 14.9 0.1 4 70 513 589 511 597 0.83 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 1_15 - 716 AAA_21 PF13304.1 303 3.1e-08 27.2 7.9 2 2 7.1e-06 0.00032 14.0 0.1 234 294 617 671 595 677 0.81 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_2 - 339 Miro PF08477.8 119 3.6e-05 17.6 0.2 1 1 7.4e-07 9.9e-05 16.2 0.1 3 51 40 84 39 106 0.80 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 MobB PF03205.9 140 0.00014 14.9 0.0 1 1 4e-06 0.00027 14.0 0.0 2 48 38 83 37 124 0.72 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 1_15 - 716 MobB PF03205.9 140 0.00019 14.5 0.5 1 1 1.1e-05 0.00072 12.6 0.2 4 23 512 531 509 540 0.90 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 11_1 - 283 LpxK PF02606.9 326 0.00042 12.6 0.1 1 1 5.6e-06 0.00075 11.8 0.1 27 71 9 52 2 83 0.76 # 425 # 1273 # 1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.325 4_3 - 124 Ribosomal_L35p PF01632.14 61 0.002 11.4 3.9 1 2 2.3e-05 0.0031 10.8 0.4 33 61 1 29 1 29 0.93 # 1700 # 2071 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.253 4_3 - 124 Ribosomal_L35p PF01632.14 61 0.002 11.4 3.9 2 2 0.019 2.5 1.5 0.2 29 41 84 96 80 114 0.79 # 1700 # 2071 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.253 2_6 - 223 ADH_zinc_N PF00107.21 130 2.7e-05 17.1 0.1 1 2 0.0068 0.92 2.4 0.0 9 78 22 89 14 91 0.52 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 ADH_zinc_N PF00107.21 130 2.7e-05 17.1 0.1 2 2 4.5e-06 0.0006 12.7 0.0 7 47 90 130 86 140 0.85 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_3 - 270 ArsA_ATPase PF02374.10 305 1.9e-14 46.7 0.4 1 1 7.7e-16 3.4e-14 45.8 0.0 5 137 6 132 1 137 0.79 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 3_15 - 253 ArsA_ATPase PF02374.10 305 5.8e-10 31.9 1.0 1 1 2.9e-11 1.3e-09 30.8 1.0 9 141 10 137 2 222 0.72 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 11_1 - 283 ArsA_ATPase PF02374.10 305 1.1e-08 27.8 0.3 1 1 6.2e-10 2.8e-08 26.4 0.3 5 63 22 80 18 154 0.71 # 425 # 1273 # 1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.325 5_2 - 339 PhoH PF02562.11 205 3.2e-05 16.5 0.0 1 2 5.8e-06 0.00078 12.0 0.0 16 70 33 91 19 127 0.67 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 PhoH PF02562.11 205 3.2e-05 16.5 0.0 2 2 0.0058 0.77 2.2 0.0 92 117 297 322 258 326 0.81 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 1_15 - 716 T2SE PF00437.15 272 1.5e-06 20.6 0.2 1 1 2.6e-08 3.4e-06 19.4 0.2 61 158 442 538 417 541 0.82 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 1_15 - 716 G-alpha PF00503.15 389 0.0006 11.8 0.2 1 1 7.9e-06 0.0011 11.0 0.2 52 87 502 537 494 671 0.78 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 2_6 - 223 Shikimate_DH PF01488.15 135 6.4e-06 19.6 0.4 1 1 1.3e-07 1.8e-05 18.2 0.1 11 76 6 70 1 106 0.79 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 F420_oxidored PF03807.12 96 1.1e-07 25.5 0.1 1 2 2.9e-08 3.8e-06 20.6 0.0 2 60 10 65 9 85 0.82 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 F420_oxidored PF03807.12 96 1.1e-07 25.5 0.1 2 2 0.0092 1.2 3.0 0.0 41 69 184 211 125 222 0.86 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 FAD_binding_3 PF01494.14 356 0.0005 12.5 0.0 1 1 6e-06 0.00081 11.8 0.0 3 39 9 45 7 71 0.86 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 5_2 - 339 SMC_N PF02463.14 220 1.9e-10 33.6 0.1 1 1 1.1e-11 4.7e-10 32.3 0.1 26 213 38 231 27 238 0.83 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 320 SMC_N PF02463.14 220 7.8e-08 25.1 0.5 1 1 3.1e-09 1.4e-07 24.3 0.5 26 213 43 229 30 235 0.76 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_15 - 716 SMC_N PF02463.14 220 3.7e-06 19.6 5.7 1 1 8.8e-06 0.00039 13.0 5.7 48 213 541 690 495 695 0.60 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 3_15 - 253 VirC1 PF07015.6 231 3.7e-08 26.0 2.8 1 2 2.9e-05 0.002 10.5 0.1 1 74 1 75 1 120 0.77 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 3_15 - 253 VirC1 PF07015.6 231 3.7e-08 26.0 2.8 2 2 6.4e-07 4.3e-05 16.0 0.5 82 165 121 202 104 215 0.88 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 2_3 - 270 VirC1 PF07015.6 231 2.5e-05 16.7 0.0 1 1 6.3e-07 4.2e-05 16.0 0.0 1 46 1 46 1 80 0.89 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 11_1 - 283 Fer4_NifH PF00142.13 273 8.1e-08 25.0 1.0 1 1 4.8e-09 2.2e-07 23.6 0.3 8 54 26 72 18 92 0.84 # 425 # 1273 # 1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.325 3_15 - 253 Fer4_NifH PF00142.13 273 5.3e-06 19.1 4.4 1 1 3.4e-06 0.00015 14.3 4.4 8 52 10 54 3 252 0.85 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 2_3 - 270 Fer4_NifH PF00142.13 273 8.5e-05 15.1 0.4 1 2 0.0017 0.078 5.4 0.0 8 41 10 43 3 58 0.87 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 2_3 - 270 Fer4_NifH PF00142.13 273 8.5e-05 15.1 0.4 2 2 0.00038 0.017 7.6 0.1 183 240 194 251 182 268 0.80 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 1_15 - 716 AAA_16 PF13191.1 185 8.9e-06 19.1 0.5 1 1 2.6e-07 1.7e-05 18.1 0.1 27 160 511 647 496 669 0.55 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_2 - 339 AAA_16 PF13191.1 185 2.3e-05 17.8 0.7 1 1 5.6e-07 3.7e-05 17.1 0.7 19 45 31 57 23 245 0.92 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 AAA_23 PF13476.1 202 8.6e-05 16.2 0.1 1 1 1.4e-06 0.00018 15.1 0.1 15 40 29 57 20 95 0.80 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 320 AAA_18 PF13238.1 129 2e-05 18.2 0.5 1 1 9.9e-07 4.4e-05 17.1 0.1 1 72 44 130 44 150 0.68 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_15 - 716 AAA_18 PF13238.1 129 0.00036 14.2 0.4 1 1 3.2e-05 0.0014 12.3 0.0 2 19 512 529 511 592 0.83 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_2 - 339 AAA_18 PF13238.1 129 0.00042 14.0 1.7 1 2 5e-05 0.0022 11.6 0.1 2 19 40 57 39 90 0.78 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 AAA_18 PF13238.1 129 0.00042 14.0 1.7 2 2 0.095 4.3 1.0 0.0 43 81 179 215 103 244 0.77 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 AAA_13 PF13166.1 712 0.00033 12.5 0.1 1 2 0.0026 0.35 2.5 0.0 21 40 41 60 33 90 0.77 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 AAA_13 PF13166.1 712 0.00033 12.5 0.1 2 2 6.1e-05 0.0081 7.9 0.0 527 579 174 225 168 253 0.89 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 2_6 - 223 GFO_IDH_MocA PF01408.17 120 0.00032 14.6 0.0 1 1 6e-06 0.0008 13.3 0.0 2 83 9 92 8 99 0.74 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 3_15 - 253 CbiA PF01656.18 195 1.5e-32 105.9 1.8 1 1 5.3e-34 1.8e-32 105.6 1.8 1 180 4 212 4 231 0.80 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 11_1 - 283 CbiA PF01656.18 195 8e-29 93.7 0.1 1 1 3e-30 1e-28 93.4 0.1 1 193 20 244 20 246 0.82 # 425 # 1273 # 1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.325 2_3 - 270 CbiA PF01656.18 195 7.6e-28 90.5 0.2 1 1 4.9e-29 1.7e-27 89.4 0.2 1 178 4 214 4 254 0.75 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_2 - 339 CbiA PF01656.18 195 0.00012 14.9 1.2 1 2 0.00086 0.029 7.1 0.1 4 21 41 58 38 66 0.84 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 CbiA PF01656.18 195 0.00012 14.9 1.2 2 2 0.0012 0.041 6.6 0.1 111 169 169 226 154 253 0.83 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 2_3 - 270 AAA_14 PF13173.1 128 4.2e-06 20.0 2.3 1 1 1.3e-07 8.5e-06 19.0 0.9 12 109 12 100 6 119 0.65 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 1_15 - 716 AAA_14 PF13173.1 128 6.7e-05 16.1 0.3 1 2 7.3e-05 0.0049 10.1 0.0 2 47 508 553 507 578 0.63 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 1_15 - 716 AAA_14 PF13173.1 128 6.7e-05 16.1 0.3 2 2 0.012 0.82 2.9 0.1 38 104 646 705 623 710 0.61 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 2_6 - 223 HI0933_like PF03486.9 409 0.00084 11.1 0.1 1 2 1.6e-05 0.0021 9.8 0.1 2 40 9 47 8 49 0.94 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 HI0933_like PF03486.9 409 0.00084 11.1 0.1 2 2 0.06 8 -2.0 0.0 117 166 167 214 126 215 0.51 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 5_2 - 339 AAA_29 PF13555.1 62 2.6e-07 23.4 0.1 1 1 1.1e-08 4.9e-07 22.6 0.1 21 51 34 64 20 68 0.77 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 320 AAA_29 PF13555.1 62 1.1e-05 18.2 0.4 1 1 5.1e-07 2.3e-05 17.3 0.4 13 39 32 57 29 62 0.84 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_15 - 716 AAA_29 PF13555.1 62 3.1e-05 16.8 0.1 1 1 6.9e-07 3.1e-05 16.8 0.1 17 41 503 526 496 539 0.76 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_2 - 339 AAA PF00004.24 132 4.2e-06 20.3 0.3 1 2 2.4e-05 0.0032 11.0 0.0 3 44 41 84 39 108 0.78 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 AAA PF00004.24 132 4.2e-06 20.3 0.3 2 2 0.00068 0.091 6.3 0.0 82 117 146 180 131 195 0.85 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 320 Sigma54_activat PF00158.21 168 0.00041 13.2 0.3 1 2 9.1e-05 0.012 8.4 0.1 19 54 38 73 23 88 0.82 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 5_3 - 320 Sigma54_activat PF00158.21 168 0.00041 13.2 0.3 2 2 0.0047 0.64 2.8 0.0 78 118 155 198 149 230 0.83 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 5_3 - 320 MMR_HSR1 PF01926.18 116 4.7e-05 16.7 0.2 1 1 1.5e-06 0.0001 15.6 0.1 2 61 44 147 43 208 0.68 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 5_2 - 339 MMR_HSR1 PF01926.18 116 0.0014 11.9 0.6 1 1 3.6e-05 0.0024 11.2 0.6 2 21 39 58 38 247 0.89 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 DUF258 PF03193.11 161 1.3e-05 17.8 0.1 1 1 4.7e-07 2.1e-05 17.1 0.1 21 62 21 63 2 90 0.75 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 1_15 - 716 DUF258 PF03193.11 161 7.4e-05 15.3 0.3 1 1 4.5e-06 0.0002 13.9 0.2 24 57 496 530 471 543 0.78 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_3 - 320 DUF258 PF03193.11 161 0.00025 13.6 0.2 1 1 1e-05 0.00046 12.7 0.2 33 65 38 71 17 93 0.80 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_6 - 223 NAD_binding_2 PF03446.10 163 4e-09 29.8 0.3 1 1 5e-11 6.8e-09 29.1 0.1 2 95 8 107 7 119 0.85 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_3 - 270 AAA_31 PF13614.1 157 2.8e-17 56.4 0.0 1 1 2.5e-18 1.1e-16 54.4 0.0 2 151 3 154 2 159 0.86 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 3_15 - 253 AAA_31 PF13614.1 157 2.2e-11 37.2 1.9 1 1 7.7e-13 3.4e-11 36.6 0.4 1 155 2 159 2 161 0.80 # 10938 # 11696 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 11_1 - 283 AAA_31 PF13614.1 157 6.9e-08 25.9 0.5 1 1 1e-08 4.5e-07 23.2 0.5 9 138 26 163 18 180 0.68 # 425 # 1273 # 1 # ID=11_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.325 5_2 - 339 AAA_33 PF13671.1 143 0.00016 14.9 0.0 1 1 4.5e-06 0.0003 14.0 0.0 1 22 38 59 38 166 0.71 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 1_15 - 716 AAA_33 PF13671.1 143 0.00083 12.6 0.0 1 1 2.7e-05 0.0018 11.5 0.0 4 20 513 529 511 563 0.90 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 2_3 - 270 KTI12 PF08433.5 270 0.00014 14.4 0.0 1 2 3.3e-06 0.00045 12.8 0.0 12 50 13 58 10 85 0.78 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 2_3 - 270 KTI12 PF08433.5 270 0.00014 14.4 0.0 2 2 0.084 11 -1.7 0.0 10 21 178 189 177 208 0.88 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 2_6 - 223 NAD_Gly3P_dh_N PF01210.18 157 0.0002 14.5 0.0 1 2 8.7e-06 0.0012 11.9 0.0 2 41 10 49 9 56 0.91 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 NAD_Gly3P_dh_N PF01210.18 157 0.0002 14.5 0.0 2 2 0.043 5.7 -0.0 0.0 38 76 172 210 147 221 0.71 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 2-Hacid_dh_C PF02826.14 178 2.4e-06 20.1 0.0 1 2 5.5e-08 7.4e-06 18.5 0.0 35 75 6 46 1 66 0.84 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 2-Hacid_dh_C PF02826.14 178 2.4e-06 20.1 0.0 2 2 0.089 12 -1.7 0.0 57 97 177 209 165 212 0.64 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 XdhC_C PF13478.1 136 6.7e-06 19.8 0.0 1 1 1.3e-07 1.8e-05 18.4 0.0 1 83 10 100 10 116 0.79 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 4_3 - 124 Ribosomal_S15 PF00312.17 83 0.00033 13.8 3.0 1 1 7.1e-06 0.00096 12.3 3.0 22 66 70 120 55 123 0.77 # 1700 # 2071 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.253 2_6 - 223 ApbA PF02558.11 151 6e-07 22.3 0.0 1 2 5.8e-08 7.7e-06 18.7 0.0 1 40 10 50 10 103 0.77 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 ApbA PF02558.11 151 6e-07 22.3 0.0 2 2 0.012 1.5 1.5 0.0 67 99 177 209 142 211 0.87 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 1_15 - 716 FtsK_SpoIIIE PF01580.13 205 0.0013 11.5 0.1 1 1 2.3e-05 0.0031 10.3 0.1 30 58 500 528 484 545 0.87 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 2_6 - 223 ELFV_dehydrog PF00208.16 244 0.00018 14.4 0.2 1 2 4e-06 0.00054 12.9 0.0 31 63 6 37 1 52 0.87 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 ELFV_dehydrog PF00208.16 244 0.00018 14.4 0.2 2 2 0.055 7.4 -0.7 0.0 187 187 152 152 61 212 0.58 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 5_3 - 320 ABC_tran PF00005.22 137 4.2e-35 114.3 0.1 1 1 1.7e-36 7.6e-35 113.5 0.1 2 136 32 182 31 183 0.93 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_15 - 716 ABC_tran PF00005.22 137 3.9e-34 111.2 0.4 1 1 1.7e-35 7.7e-34 110.3 0.4 1 137 498 648 498 648 0.84 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_2 - 339 ABC_tran PF00005.22 137 2e-32 105.7 0.1 1 1 9.8e-34 4.4e-32 104.6 0.0 3 136 28 184 26 185 0.93 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 2_6 - 223 UDPG_MGDP_dh_N PF03721.9 185 1e-05 18.3 0.1 1 1 1.8e-07 2.4e-05 17.1 0.1 2 57 9 66 8 80 0.87 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 5_2 - 339 AAA_10 PF12846.2 304 1.8e-06 20.8 0.2 1 2 2.7e-05 0.0012 11.6 0.1 4 21 39 56 37 71 0.85 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 AAA_10 PF12846.2 304 1.8e-06 20.8 0.2 2 2 0.00055 0.025 7.3 0.0 216 268 170 222 131 249 0.74 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 1_15 - 716 AAA_10 PF12846.2 304 0.00018 14.3 1.2 1 1 1.2e-05 0.00051 12.8 0.9 5 24 512 531 508 546 0.85 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 5_3 - 320 AAA_10 PF12846.2 304 0.00025 13.8 0.5 1 2 3e-05 0.0013 11.4 0.3 6 32 46 73 42 139 0.72 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 5_3 - 320 AAA_10 PF12846.2 304 0.00025 13.8 0.5 2 2 0.081 3.6 0.2 0.0 215 265 167 217 137 235 0.79 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 1_15 - 716 SbcCD_C PF13558.1 90 7.6e-05 15.9 0.4 1 1 3.6e-06 0.00048 13.4 0.4 18 84 605 658 594 663 0.72 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 1_15 - 716 DUF815 PF05673.8 250 0.00011 14.4 0.0 1 1 1.5e-06 0.0002 13.6 0.0 55 110 510 569 502 593 0.82 # 8479 # 10626 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.363 2_6 - 223 Pyr_redox PF00070.22 80 0.00018 15.2 0.8 1 2 8.2e-05 0.011 9.5 0.0 1 32 9 40 9 69 0.88 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 Pyr_redox PF00070.22 80 0.00018 15.2 0.8 2 2 0.007 0.94 3.3 0.0 17 65 92 145 83 158 0.70 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 4_9 - 127 AAA_11 PF13086.1 236 0.012 8.4 8.5 1 1 0.00011 0.015 8.2 8.5 72 163 9 107 3 120 0.53 # 6663 # 7043 # -1 # ID=4_9;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.339 5_2 - 339 Sigma54_activ_2 PF14532.1 138 0.00023 14.6 0.0 1 2 8.9e-05 0.012 9.0 0.0 20 50 35 65 21 88 0.79 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 Sigma54_activ_2 PF14532.1 138 0.00023 14.6 0.0 2 2 0.012 1.6 2.1 0.0 73 96 289 312 269 320 0.85 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 4_3 - 124 AAA_32 PF13654.1 509 0.00011 14.3 4.5 1 1 8.3e-07 0.00011 14.2 4.5 136 243 17 120 1 123 0.84 # 1700 # 2071 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.253 2_6 - 223 TrkA_N PF02254.13 116 2e-27 88.9 0.2 1 1 5e-29 6.7e-27 87.2 0.1 1 116 10 125 10 125 0.96 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 1_20 - 54 Terminase_GpA PF05876.7 557 0.00087 11.0 0.1 1 1 6.6e-06 0.00089 10.9 0.1 203 243 13 49 8 53 0.85 # 14668 # 14829 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.235 2_6 - 223 IlvN PF07991.7 165 1.3e-05 17.9 0.1 1 2 4.2e-07 5.6e-05 15.9 0.0 4 46 7 49 4 69 0.91 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_6 - 223 IlvN PF07991.7 165 1.3e-05 17.9 0.1 2 2 0.048 6.4 -0.6 0.0 45 69 137 161 107 211 0.58 # 4253 # 4921 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.327 2_3 - 270 AAA_24 PF13479.1 213 3.8e-05 16.7 0.1 1 1 7.4e-07 9.9e-05 15.3 0.1 11 75 10 128 6 129 0.77 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_2 - 339 NACHT PF05729.7 166 0.00035 13.6 0.0 1 1 5.1e-06 0.00068 12.6 0.0 2 21 38 57 37 67 0.87 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 AAA_25 PF13481.1 194 2.2e-06 20.5 0.1 1 2 3.8e-07 2.5e-05 17.0 0.0 29 54 32 57 4 60 0.80 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_2 - 339 AAA_25 PF13481.1 194 2.2e-06 20.5 0.1 2 2 0.029 2 1.1 0.0 134 188 166 215 126 216 0.66 # 313 # 1329 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.382 5_3 - 320 AAA_25 PF13481.1 194 0.00087 12.0 0.1 1 2 0.00019 0.013 8.2 0.0 30 50 38 58 30 107 0.91 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 5_3 - 320 AAA_25 PF13481.1 194 0.00087 12.0 0.1 2 2 0.024 1.6 1.4 0.0 165 188 190 213 161 214 0.80 # 1326 # 2285 # 1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_3 - 270 APS_kinase PF01583.15 157 0.00095 12.2 0.0 1 2 4.4e-05 0.0059 9.6 0.0 10 41 10 41 2 91 0.73 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 2_3 - 270 APS_kinase PF01583.15 157 0.00095 12.2 0.0 2 2 0.054 7.3 -0.5 0.0 69 89 135 155 132 167 0.86 # 2242 # 3051 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/b1be4d3b-cce2-4dbf-a702-5a1ffb00fa4a # Target file: checkm_output/bins/pGCA_002078975.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002078975.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/b1be4d3b-cce2-4dbf-a702-5a1ffb00fa4a checkm_output/bins/pGCA_002078975.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:48:20 2020 # [ok]