# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 5_12 - 270 Methyltransf_32 PF13679.1 141 0.0005 13.3 0.0 1 2 0.0028 0.45 3.8 0.0 32 77 11 56 4 97 0.84 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_12 - 270 Methyltransf_32 PF13679.1 141 0.0005 13.3 0.0 2 2 0.00022 0.035 7.3 0.0 23 50 169 195 158 224 0.79 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 2_10 - 532 UPF0020 PF01170.13 180 2.4e-05 17.5 0.0 1 1 3.1e-07 4.9e-05 16.5 0.0 31 120 219 306 202 314 0.77 # 9175 # 10770 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.398 3_2 - 339 cobW PF02492.14 178 0.00094 12.2 0.3 1 1 3.3e-05 0.0051 9.8 0.3 2 121 38 170 37 205 0.61 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 1_27 - 80 RuvB_C PF05491.8 76 0.00076 12.7 0.1 1 2 0.036 5.8 0.3 0.1 55 67 16 28 12 33 0.80 # 25580 # 25819 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.425 1_27 - 80 RuvB_C PF05491.8 76 0.00076 12.7 0.1 2 2 2.9e-05 0.0045 10.2 0.0 6 46 40 76 38 79 0.87 # 25580 # 25819 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.425 5_9 - 223 Saccharop_dh PF03435.13 386 0.00071 12.1 0.0 1 1 6.9e-06 0.0011 11.5 0.0 1 43 10 50 10 87 0.84 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 7_5 - 210 Thymidylate_kin PF02223.12 186 0.0011 11.9 0.4 1 1 1.8e-05 0.0028 10.6 0.2 1 20 33 52 33 60 0.85 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 3_2 - 339 ABC_ATPase PF09818.4 448 0.00012 14.2 1.6 1 2 5.1e-05 0.008 8.3 0.0 240 264 31 56 11 61 0.89 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 ABC_ATPase PF09818.4 448 0.00012 14.2 1.6 2 2 0.00082 0.13 4.3 0.4 322 413 156 232 141 257 0.68 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_6 - 253 IstB_IS21 PF01695.12 178 1.3e-65 213.6 0.1 1 1 2.5e-67 1.9e-65 213.1 0.1 5 178 56 229 53 229 0.99 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_2 - 339 IstB_IS21 PF01695.12 178 0.00074 12.5 0.0 1 1 2.2e-05 0.0017 11.3 0.0 44 67 33 56 23 61 0.90 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_12 - 270 MipZ PF09140.6 261 6e-12 38.7 0.0 1 1 5.8e-12 9.1e-10 31.5 0.0 3 132 4 155 2 177 0.66 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_12 - 270 YhjQ PF06564.7 244 8.4e-12 38.4 0.0 1 1 8e-14 1.3e-11 37.9 0.0 1 150 1 154 1 200 0.78 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_9 - 223 3HCDH_N PF02737.13 180 0.00025 14.3 0.0 1 1 2.5e-06 0.0004 13.6 0.0 2 45 10 53 9 70 0.89 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 2_22 - 146 Usp PF00582.21 140 1.4e-24 80.4 0.0 1 1 1e-26 1.6e-24 80.2 0.0 2 140 7 145 6 145 0.97 # 22703 # 23140 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.363 3_2 - 339 NB-ARC PF00931.17 287 0.00016 14.2 0.1 1 1 5.3e-06 0.00042 12.7 0.0 20 40 37 57 24 69 0.86 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_3 - 320 NB-ARC PF00931.17 287 0.001 11.5 0.0 1 1 2e-05 0.0016 10.9 0.0 19 44 41 66 31 138 0.88 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_2 - 339 AAA_22 PF13401.1 131 7.6e-08 26.1 0.8 1 1 6.9e-08 2.2e-06 21.4 0.8 4 123 36 214 33 220 0.71 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 7_5 - 210 AAA_22 PF13401.1 131 1.7e-05 18.5 0.2 1 1 6.9e-06 0.00022 15.0 0.2 3 122 27 184 23 193 0.64 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 5_6 - 253 AAA_22 PF13401.1 131 2.7e-05 17.9 5.8 1 1 8.5e-06 0.00027 14.7 0.1 6 102 100 175 95 204 0.63 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_3 - 320 AAA_22 PF13401.1 131 0.00019 15.2 1.7 1 1 0.00015 0.0047 10.6 1.7 9 123 46 212 39 221 0.60 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 2_11 - 1026 AAA_22 PF13401.1 131 0.0014 12.3 6.0 1 1 3e-05 0.00096 12.9 0.7 68 125 362 447 280 452 0.55 # 10770 # 13847 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.379 5_12 - 270 ATP_bind_1 PF03029.12 238 5.5e-05 16.3 0.1 1 1 2.4e-06 0.00038 13.6 0.1 6 99 12 130 10 137 0.67 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 3_3 - 320 PRK PF00485.13 194 0.00012 15.3 0.2 1 1 1.9e-06 0.00029 14.0 0.0 2 81 44 124 43 140 0.80 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 5_12 - 270 SRP54 PF00448.17 196 2.4e-05 17.4 0.7 1 1 4.8e-07 7.7e-05 15.7 0.1 10 40 11 41 1 46 0.84 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 7_5 - 210 AAA_15 PF13175.1 415 4.7e-09 29.2 14.4 1 2 3.8e-08 2e-06 20.6 8.7 5 69 11 116 10 137 0.69 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 7_5 - 210 AAA_15 PF13175.1 415 4.7e-09 29.2 14.4 2 2 1.7e-05 0.0009 11.9 0.3 372 414 149 190 134 191 0.90 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 3_2 - 339 AAA_15 PF13175.1 415 4.9e-09 29.2 0.1 1 2 0.00014 0.0073 8.9 0.0 17 56 30 70 14 132 0.75 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 AAA_15 PF13175.1 415 4.9e-09 29.2 0.1 2 2 1.6e-07 8.4e-06 18.5 0.0 361 411 172 216 154 220 0.81 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_3 - 320 AAA_15 PF13175.1 415 1.5e-05 17.7 0.6 1 2 1.7e-05 0.0009 11.9 0.9 27 99 46 132 6 141 0.83 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_3 - 320 AAA_15 PF13175.1 415 1.5e-05 17.7 0.6 2 2 0.0069 0.36 3.3 0.0 370 410 173 213 162 218 0.81 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 5_9 - 223 NAD_binding_7 PF13241.1 103 1.9e-05 18.4 0.1 1 1 2.6e-07 4e-05 17.4 0.1 6 69 6 80 3 115 0.69 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 3_2 - 339 AAA_17 PF13207.1 121 0.00013 16.4 0.1 1 1 6.1e-06 0.00032 15.1 0.1 1 20 38 57 38 82 0.90 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_6 - 253 AAA_17 PF13207.1 121 0.00059 14.2 1.8 1 1 6.6e-05 0.0035 11.7 0.1 3 64 102 171 100 239 0.56 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_3 - 320 AAA_17 PF13207.1 121 0.014 9.8 3.9 1 1 0.001 0.053 7.9 3.9 2 19 44 61 43 300 0.79 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_2 - 339 AAA_21 PF13304.1 303 1e-15 51.9 0.1 1 2 1.1e-05 0.00057 13.4 0.0 2 25 39 64 38 89 0.76 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 AAA_21 PF13304.1 303 1e-15 51.9 0.1 2 2 9e-13 4.8e-11 36.6 0.0 227 300 147 218 88 221 0.84 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 7_5 - 210 AAA_21 PF13304.1 303 8.2e-14 45.7 6.6 1 1 9.6e-14 5e-12 39.8 6.6 6 302 35 191 30 192 0.80 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 3_3 - 320 AAA_21 PF13304.1 303 1.4e-12 41.7 2.8 1 1 2.9e-13 1.5e-11 38.3 0.9 3 299 45 215 44 219 0.95 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_2 - 339 Miro PF08477.8 119 4.3e-05 17.6 0.2 1 1 7.4e-07 0.00012 16.2 0.1 3 51 40 84 39 106 0.80 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_6 - 253 MobB PF03205.9 140 0.00015 15.0 0.2 1 1 3.6e-05 0.0028 10.9 0.0 3 32 101 130 100 140 0.87 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_2 - 339 MobB PF03205.9 140 0.00016 14.9 0.0 1 1 4e-06 0.00032 14.0 0.0 2 48 38 83 37 124 0.72 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 4_5 - 124 Ribosomal_L35p PF01632.14 61 0.00058 13.3 2.6 1 2 2.1e-05 0.0017 11.9 0.5 33 61 1 29 1 29 0.95 # 3711 # 4082 # 1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.258 4_5 - 124 Ribosomal_L35p PF01632.14 61 0.00058 13.3 2.6 2 2 0.049 3.8 1.1 0.1 29 40 84 95 80 108 0.82 # 3711 # 4082 # 1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.258 1_30 - 124 Ribosomal_L35p PF01632.14 61 0.0053 10.3 3.3 1 2 0.00014 0.011 9.2 0.3 33 61 1 29 1 29 0.92 # 27663 # 28034 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_30 - 124 Ribosomal_L35p PF01632.14 61 0.0053 10.3 3.3 2 2 0.037 3 1.5 0.2 29 41 84 96 80 114 0.79 # 27663 # 28034 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 5_9 - 223 ADH_zinc_N PF00107.21 130 3.2e-05 17.1 0.1 1 2 0.0068 1.1 2.4 0.0 9 78 22 89 14 91 0.52 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 ADH_zinc_N PF00107.21 130 3.2e-05 17.1 0.1 2 2 4.5e-06 0.00071 12.7 0.0 7 47 90 130 86 140 0.85 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_12 - 270 ArsA_ATPase PF02374.10 305 2.2e-14 46.7 0.4 1 1 2.6e-16 4e-14 45.8 0.0 5 137 6 132 1 137 0.79 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_6 - 253 PhoH PF02562.11 205 1.9e-06 20.8 0.0 1 1 4.6e-08 3.6e-06 19.9 0.0 12 61 91 140 80 172 0.79 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_2 - 339 PhoH PF02562.11 205 1.2e-05 18.1 0.0 1 2 1.2e-05 0.00092 12.0 0.0 16 70 33 91 19 127 0.67 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 PhoH PF02562.11 205 1.2e-05 18.1 0.0 2 2 0.0036 0.29 3.9 0.0 92 117 297 322 258 326 0.82 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_6 - 253 AFG1_ATPase PF03969.11 362 8.9e-06 18.2 0.1 1 1 6.3e-08 1e-05 18.0 0.1 63 213 99 245 37 252 0.73 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 7_5 - 210 T2SE PF00437.15 272 4.7e-05 15.9 0.2 1 1 4.8e-07 7.6e-05 15.2 0.2 110 155 10 55 4 66 0.87 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 5_9 - 223 Shikimate_DH PF01488.15 135 7.5e-06 19.6 0.4 1 1 1.3e-07 2.1e-05 18.2 0.1 11 76 6 70 1 106 0.79 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 F420_oxidored PF03807.12 96 1.3e-07 25.5 0.1 1 2 2.9e-08 4.5e-06 20.6 0.0 2 60 10 65 9 85 0.82 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 F420_oxidored PF03807.12 96 1.3e-07 25.5 0.1 2 2 0.0092 1.5 3.0 0.0 41 69 184 211 125 222 0.86 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 FAD_binding_3 PF01494.14 356 0.00058 12.5 0.0 1 1 6e-06 0.00095 11.8 0.0 3 39 9 45 7 71 0.86 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 3_2 - 339 SMC_N PF02463.14 220 2.3e-10 33.6 0.1 1 1 1.1e-11 5.6e-10 32.3 0.1 26 213 38 231 27 238 0.83 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 7_5 - 210 SMC_N PF02463.14 220 1.1e-09 31.3 0.6 1 2 1.7e-05 0.00092 12.0 0.3 23 45 27 49 10 69 0.82 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 7_5 - 210 SMC_N PF02463.14 220 1.1e-09 31.3 0.6 2 2 3e-07 1.6e-05 17.8 0.0 155 205 143 194 128 207 0.83 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 3_3 - 320 SMC_N PF02463.14 220 9.1e-08 25.1 0.5 1 1 3.1e-09 1.6e-07 24.3 0.5 26 213 43 229 30 235 0.76 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 5_12 - 270 VirC1 PF07015.6 231 2.9e-05 16.7 0.0 1 1 3.1e-07 5e-05 16.0 0.0 1 46 1 46 1 80 0.89 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_12 - 270 Fer4_NifH PF00142.13 273 0.0001 15.1 0.4 1 2 0.00058 0.091 5.4 0.0 8 41 10 43 3 58 0.87 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_12 - 270 Fer4_NifH PF00142.13 273 0.0001 15.1 0.4 2 2 0.00013 0.02 7.6 0.1 183 240 194 251 182 268 0.80 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 3_2 - 339 AAA_16 PF13191.1 185 2.7e-05 17.8 0.7 1 1 8.3e-07 4.4e-05 17.1 0.7 19 45 31 57 23 245 0.92 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_6 - 253 AAA_16 PF13191.1 185 3.7e-05 17.3 0.4 1 1 3.5e-06 0.00018 15.0 0.0 25 81 99 156 84 191 0.74 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 7_5 - 210 AAA_16 PF13191.1 185 0.00027 14.5 0.0 1 1 5.9e-06 0.00031 14.3 0.0 11 63 16 67 8 183 0.83 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 3_2 - 339 AAA_23 PF13476.1 202 0.0001 16.2 0.1 1 1 6.9e-06 0.00022 15.1 0.1 15 40 29 57 20 95 0.80 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 7_5 - 210 AAA_23 PF13476.1 202 0.00018 15.4 4.5 1 1 1.8e-05 0.00057 13.8 4.5 14 43 20 52 10 196 0.64 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 1_30 - 124 AAA_23 PF13476.1 202 0.013 9.3 12.9 1 1 0.00049 0.016 9.1 12.9 89 197 8 115 1 120 0.41 # 27663 # 28034 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 2_3 - 175 AAA_23 PF13476.1 202 0.024 8.5 28.2 1 1 0.0012 0.037 7.9 28.2 87 202 38 156 2 156 0.48 # 1115 # 1639 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.307 1_32 - 137 AAA_23 PF13476.1 202 0.057 7.2 21.0 1 1 0.0023 0.072 6.9 21.0 104 202 17 118 2 127 0.56 # 29861 # 30271 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.316 3_3 - 320 AAA_18 PF13238.1 129 2.3e-05 18.2 0.5 1 1 9.9e-07 5.2e-05 17.1 0.1 1 72 44 130 44 150 0.68 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_2 - 339 AAA_18 PF13238.1 129 0.00026 14.9 0.5 1 2 5e-05 0.0026 11.6 0.1 2 19 40 57 39 90 0.78 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 AAA_18 PF13238.1 129 0.00026 14.9 0.5 2 2 0.095 5 1.0 0.0 43 81 179 215 103 244 0.77 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 7_5 - 210 AAA_18 PF13238.1 129 0.0027 11.6 2.4 1 1 0.00039 0.021 8.7 2.4 1 42 31 71 31 203 0.78 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 3_2 - 339 AAA_13 PF13166.1 712 0.0004 12.4 0.1 1 2 0.0052 0.41 2.5 0.0 21 40 41 60 33 90 0.77 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 AAA_13 PF13166.1 712 0.0004 12.4 0.1 2 2 0.00012 0.0096 7.9 0.0 527 579 174 225 168 253 0.89 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 6_7 - 211 AAA_13 PF13166.1 712 0.0051 8.8 25.7 1 1 8.9e-05 0.007 8.3 25.7 283 438 31 194 5 203 0.78 # 6862 # 7494 # -1 # ID=6_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.308 5_9 - 223 GFO_IDH_MocA PF01408.17 120 0.00038 14.6 0.0 1 1 6e-06 0.00094 13.3 0.0 2 83 9 92 8 99 0.74 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_12 - 270 CbiA PF01656.18 195 8.9e-28 90.5 0.2 1 1 3.7e-29 2e-27 89.4 0.2 1 178 4 214 4 254 0.75 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 3_2 - 339 CbiA PF01656.18 195 0.00014 14.9 1.2 1 2 0.00065 0.034 7.1 0.1 4 21 41 58 38 66 0.84 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 CbiA PF01656.18 195 0.00014 14.9 1.2 2 2 0.00092 0.048 6.6 0.1 111 169 169 226 154 253 0.83 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_6 - 253 CbiA PF01656.18 195 0.0029 10.5 2.7 1 2 0.0025 0.13 5.2 0.1 6 28 105 127 101 132 0.81 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 5_6 - 253 CbiA PF01656.18 195 0.0029 10.5 2.7 2 2 0.0049 0.26 4.2 0.0 78 102 145 167 124 171 0.73 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 2_10 - 532 Methyltransf_25 PF13649.1 101 0.0015 12.5 0.0 1 2 0.00029 0.046 7.7 0.0 2 74 221 306 220 341 0.76 # 9175 # 10770 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.398 2_10 - 532 Methyltransf_25 PF13649.1 101 0.0015 12.5 0.0 2 2 0.038 6 0.9 0.0 42 78 436 487 389 528 0.50 # 9175 # 10770 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.398 5_12 - 270 AAA_14 PF13173.1 128 5e-06 20.0 2.3 1 1 1.9e-07 1e-05 19.0 0.9 12 109 12 100 6 119 0.65 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_6 - 253 AAA_14 PF13173.1 128 6.7e-05 16.4 0.3 1 1 4.7e-06 0.00025 14.5 0.2 3 74 99 172 97 249 0.69 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 7_5 - 210 AAA_14 PF13173.1 128 0.00021 14.7 1.1 1 1 0.00027 0.014 8.8 1.1 2 23 28 49 27 200 0.82 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 5_9 - 223 HI0933_like PF03486.9 409 0.001 11.1 0.1 1 2 1.6e-05 0.0025 9.8 0.1 2 40 9 47 8 49 0.94 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 HI0933_like PF03486.9 409 0.001 11.1 0.1 2 2 0.06 9.5 -2.0 0.0 117 166 167 214 126 215 0.51 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 3_2 - 339 AAA_29 PF13555.1 62 3.1e-07 23.4 0.1 1 1 1.5e-08 5.8e-07 22.6 0.1 21 51 34 64 20 68 0.77 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_3 - 320 AAA_29 PF13555.1 62 1.3e-05 18.2 0.4 1 1 6.8e-07 2.7e-05 17.3 0.4 13 39 32 57 29 62 0.84 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 5_6 - 253 AAA_29 PF13555.1 62 0.00013 15.0 0.0 1 1 1e-05 0.00041 13.4 0.0 13 38 88 113 81 120 0.86 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 7_5 - 210 AAA_29 PF13555.1 62 0.00034 13.7 0.1 1 1 1.7e-05 0.00069 12.7 0.1 15 47 21 52 16 63 0.78 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 5_6 - 253 AAA PF00004.24 132 8.6e-07 22.8 0.1 1 1 3.5e-08 2.7e-06 21.2 0.0 1 94 101 189 101 239 0.68 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_2 - 339 AAA PF00004.24 132 5.1e-06 20.3 0.3 1 2 4.7e-05 0.0037 11.0 0.0 3 44 41 84 39 108 0.78 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 AAA PF00004.24 132 5.1e-06 20.3 0.3 2 2 0.0014 0.11 6.3 0.0 82 117 146 180 131 195 0.85 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_6 - 253 Bac_DnaA PF00308.13 219 1.9e-12 40.8 0.1 1 1 2e-14 3.1e-12 40.1 0.1 34 136 98 198 90 215 0.88 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 1_26 - 280 Ribosomal_L20 PF00453.13 108 0.00055 13.4 0.3 1 1 8.6e-06 0.0014 12.2 0.3 37 96 17 79 3 84 0.83 # 24661 # 25500 # 1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.382 5_6 - 253 Sigma54_activat PF00158.21 168 0.00041 13.4 0.1 1 1 0.0001 0.0054 9.7 0.1 18 50 94 126 82 193 0.64 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_3 - 320 Sigma54_activat PF00158.21 168 0.00049 13.2 0.3 1 2 0.00027 0.014 8.4 0.1 19 54 38 73 23 88 0.82 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_3 - 320 Sigma54_activat PF00158.21 168 0.00049 13.2 0.3 2 2 0.014 0.75 2.8 0.0 78 118 155 198 149 230 0.83 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_2 - 339 Sigma54_activat PF00158.21 168 0.0012 11.9 0.0 1 1 5.3e-05 0.0028 10.7 0.0 9 48 23 62 17 71 0.73 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_3 - 320 MMR_HSR1 PF01926.18 116 5.6e-05 16.7 0.2 1 1 1.5e-06 0.00012 15.6 0.1 2 61 44 147 43 208 0.68 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_2 - 339 MMR_HSR1 PF01926.18 116 0.0017 11.9 0.6 1 1 3.6e-05 0.0028 11.2 0.6 2 21 39 58 38 247 0.89 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_10 - 532 N6_Mtase PF02384.11 311 3.1e-121 397.7 0.0 1 1 2.8e-123 4.4e-121 397.2 0.0 2 310 168 476 167 477 0.98 # 9175 # 10770 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.398 3_2 - 339 DUF258 PF03193.11 161 1.5e-05 17.8 0.1 1 1 4.7e-07 2.5e-05 17.1 0.1 21 62 21 63 2 90 0.75 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_3 - 320 DUF258 PF03193.11 161 0.0003 13.6 0.2 1 1 1e-05 0.00054 12.7 0.2 33 65 38 71 17 93 0.80 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 5_6 - 253 DUF258 PF03193.11 161 0.00052 12.8 0.0 1 1 1.7e-05 0.00089 12.0 0.0 25 56 88 119 66 169 0.79 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 1_7 - 65 POT1 PF02765.12 146 0.00045 13.7 0.1 1 1 3.2e-06 0.00051 13.5 0.1 15 66 2 56 1 58 0.87 # 7014 # 7208 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.328 5_9 - 223 NAD_binding_2 PF03446.10 163 4.8e-09 29.8 0.3 1 1 5e-11 8e-09 29.1 0.1 2 95 8 107 7 119 0.85 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_12 - 270 AAA_31 PF13614.1 157 3.3e-17 56.4 0.0 1 1 8.4e-19 1.3e-16 54.4 0.0 2 151 3 154 2 159 0.86 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_6 - 253 NTPase_1 PF03266.10 168 0.00069 12.9 0.1 1 2 0.0072 1.1 2.4 0.0 5 27 104 126 100 140 0.73 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 5_6 - 253 NTPase_1 PF03266.10 168 0.00069 12.9 0.1 2 2 0.00012 0.019 8.2 0.0 86 109 150 173 137 235 0.77 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_2 - 339 AAA_33 PF13671.1 143 0.00021 14.8 0.0 1 1 2.2e-06 0.00035 14.0 0.0 1 22 38 59 38 166 0.71 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_12 - 270 KTI12 PF08433.5 270 0.00016 14.4 0.0 1 2 3.3e-06 0.00053 12.8 0.0 12 50 13 58 10 85 0.78 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_12 - 270 KTI12 PF08433.5 270 0.00016 14.4 0.0 2 2 0.084 13 -1.7 0.0 10 21 178 189 177 208 0.88 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 2_10 - 532 Methyltransf_26 PF13659.1 117 1.2e-13 44.7 0.0 1 1 2e-15 3.1e-13 43.4 0.0 2 116 218 353 217 354 0.78 # 9175 # 10770 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.398 5_9 - 223 NAD_Gly3P_dh_N PF01210.18 157 0.00023 14.5 0.0 1 2 8.7e-06 0.0014 11.9 0.0 2 41 10 49 9 56 0.91 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 NAD_Gly3P_dh_N PF01210.18 157 0.00023 14.5 0.0 2 2 0.043 6.7 -0.0 0.0 38 76 172 210 147 221 0.71 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 2-Hacid_dh_C PF02826.14 178 2.8e-06 20.1 0.0 1 2 5.5e-08 8.7e-06 18.5 0.0 35 75 6 46 1 66 0.84 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 2-Hacid_dh_C PF02826.14 178 2.8e-06 20.1 0.0 2 2 0.089 14 -1.7 0.0 57 97 177 209 165 212 0.64 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 XdhC_C PF13478.1 136 8e-06 19.8 0.0 1 1 1.3e-07 2.1e-05 18.4 0.0 1 83 10 100 10 116 0.79 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 1_30 - 124 Ribosomal_S15 PF00312.17 83 0.00039 13.7 3.0 1 1 1.4e-05 0.0011 12.3 3.0 22 66 70 120 55 123 0.77 # 27663 # 28034 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 8_5 - 123 Ribosomal_S15 PF00312.17 83 0.00048 13.5 2.3 1 1 2.1e-05 0.0017 11.7 2.3 22 66 70 120 55 122 0.77 # 1785 # 2153 # 1 # ID=8_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.266 5_9 - 223 ApbA PF02558.11 151 7.1e-07 22.3 0.0 1 2 5.8e-08 9.1e-06 18.7 0.0 1 40 10 50 10 103 0.77 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 ApbA PF02558.11 151 7.1e-07 22.3 0.0 2 2 0.012 1.8 1.5 0.0 67 99 177 209 142 211 0.87 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 2_10 - 532 MTS PF05175.9 170 0.00028 13.8 0.0 1 1 3.6e-06 0.00057 12.8 0.0 55 140 243 352 211 365 0.71 # 9175 # 10770 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.398 5_2 - 63 CoA_binding_3 PF13727.1 175 0.0008 12.8 1.2 1 1 5.1e-06 0.0008 12.8 1.2 25 58 11 45 1 52 0.76 # 143 # 331 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.206 7_1 - 134 eIF-5a PF01287.15 69 0.0025 11.4 4.0 1 2 5.9e-05 0.0093 9.5 0.9 21 55 1 35 1 39 0.88 # 782 # 1183 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.341 7_1 - 134 eIF-5a PF01287.15 69 0.0025 11.4 4.0 2 2 0.0097 1.5 2.4 0.1 21 47 102 127 97 131 0.78 # 782 # 1183 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.341 5_9 - 223 ELFV_dehydrog PF00208.16 244 0.00022 14.4 0.2 1 2 4e-06 0.00063 12.9 0.0 31 63 6 37 1 52 0.87 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 ELFV_dehydrog PF00208.16 244 0.00022 14.4 0.2 2 2 0.055 8.7 -0.7 0.0 187 187 152 152 61 212 0.58 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 3_3 - 320 ABC_tran PF00005.22 137 5e-35 114.3 0.1 1 1 1.7e-36 9e-35 113.5 0.1 2 136 32 182 31 183 0.93 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_2 - 339 ABC_tran PF00005.22 137 2.5e-32 105.6 0.1 1 1 9.8e-34 5.1e-32 104.6 0.0 3 136 28 184 26 185 0.93 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 7_5 - 210 ABC_tran PF00005.22 137 6.7e-26 84.8 0.1 1 1 1.7e-27 8.7e-26 84.4 0.1 1 137 18 157 18 157 0.95 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 2_10 - 532 Eco57I PF07669.6 106 9.4e-07 22.8 0.1 1 1 3.8e-08 5.9e-06 20.2 0.0 2 104 292 403 291 405 0.87 # 9175 # 10770 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.398 5_9 - 223 UDPG_MGDP_dh_N PF03721.9 185 1.2e-05 18.3 0.1 1 1 1.8e-07 2.9e-05 17.1 0.1 2 57 9 66 8 80 0.87 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_6 - 253 RuvB_N PF05496.7 234 0.00027 13.5 0.0 1 1 3.8e-06 0.0006 12.4 0.0 50 113 98 171 69 180 0.73 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_2 - 339 AAA_10 PF12846.2 304 2.2e-06 20.8 0.2 1 2 2.7e-05 0.0014 11.6 0.1 4 21 39 56 37 71 0.85 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 AAA_10 PF12846.2 304 2.2e-06 20.8 0.2 2 2 0.00055 0.029 7.3 0.0 216 268 170 222 131 249 0.74 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_6 - 253 AAA_10 PF12846.2 304 2.1e-05 17.6 0.0 1 1 2.2e-06 0.00012 15.1 0.0 3 36 100 166 98 175 0.79 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_3 - 320 AAA_10 PF12846.2 304 0.00029 13.9 0.5 1 2 3e-05 0.0016 11.4 0.3 6 32 46 73 42 139 0.72 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_3 - 320 AAA_10 PF12846.2 304 0.00029 13.9 0.5 2 2 0.081 4.3 0.2 0.0 215 265 167 217 137 235 0.79 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 2_11 - 1026 ResIII PF04851.10 184 1.7e-44 145.3 2.9 1 1 2.2e-46 1.7e-44 145.3 2.9 2 183 262 448 261 449 0.95 # 10770 # 13847 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.379 5_6 - 253 ResIII PF04851.10 184 0.00013 15.4 0.2 1 1 5.3e-06 0.00042 13.7 0.2 22 69 84 144 47 213 0.77 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 5_6 - 253 PduV-EutP PF10662.4 143 0.00055 13.0 0.0 1 2 5.9e-05 0.0094 9.0 0.0 3 28 100 125 98 141 0.78 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 5_6 - 253 PduV-EutP PF10662.4 143 0.00055 13.0 0.0 2 2 0.011 1.8 1.6 0.0 26 76 187 238 178 250 0.74 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 2_11 - 1026 DEAD PF00270.24 169 2.6e-12 40.1 1.5 1 1 4.7e-14 7.4e-12 38.6 0.6 3 162 267 447 265 454 0.70 # 10770 # 13847 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.379 5_9 - 223 Pyr_redox PF00070.22 80 0.00021 15.2 0.8 1 2 8.2e-05 0.013 9.5 0.0 1 32 9 40 9 69 0.88 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 Pyr_redox PF00070.22 80 0.00021 15.2 0.8 2 2 0.007 1.1 3.3 0.0 17 65 92 145 83 158 0.70 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 2_15 - 208 AAA_11 PF13086.1 236 0.00057 13.0 1.0 1 1 4.4e-06 0.0007 12.7 1.0 98 176 36 117 8 127 0.70 # 16598 # 17221 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.373 3_2 - 339 Sigma54_activ_2 PF14532.1 138 0.00034 14.3 0.0 1 2 8.9e-05 0.014 9.0 0.0 20 50 35 65 21 88 0.79 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 Sigma54_activ_2 PF14532.1 138 0.00034 14.3 0.0 2 2 0.015 2.4 1.8 0.0 73 96 289 312 269 319 0.85 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 1_30 - 124 AAA_32 PF13654.1 509 0.00012 14.3 3.8 1 1 2.4e-06 0.00013 14.3 3.8 137 243 18 120 2 123 0.87 # 27663 # 28034 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 4_5 - 124 AAA_32 PF13654.1 509 0.00033 12.9 3.2 1 1 7.2e-06 0.00038 12.7 3.2 137 238 18 115 2 122 0.86 # 3711 # 4082 # 1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.258 8_5 - 123 AAA_32 PF13654.1 509 0.00071 11.8 3.6 1 1 1.6e-05 0.00082 11.6 3.6 137 242 18 119 2 121 0.85 # 1785 # 2153 # 1 # ID=8_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.266 5_6 - 253 RNA_helicase PF00910.17 107 1.7e-05 18.6 0.1 1 1 4.1e-07 6.5e-05 16.7 0.0 2 82 102 193 101 202 0.81 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 7_5 - 210 UPF0079 PF02367.12 123 0.0011 12.2 0.2 1 1 1.3e-05 0.0021 11.2 0.2 7 45 20 58 14 62 0.83 # 3385 # 4014 # -1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.276 5_9 - 223 TrkA_N PF02254.13 116 2.3e-27 88.9 0.2 1 1 5e-29 7.9e-27 87.2 0.1 1 116 10 125 10 125 0.96 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 IlvN PF07991.7 165 1.6e-05 17.9 0.1 1 2 4.2e-07 6.6e-05 15.9 0.0 4 46 7 49 4 69 0.91 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_9 - 223 IlvN PF07991.7 165 1.6e-05 17.9 0.1 2 2 0.048 7.6 -0.6 0.0 45 69 137 161 107 211 0.58 # 6127 # 6795 # 1 # ID=5_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.326 5_12 - 270 AAA_24 PF13479.1 213 4.4e-05 16.7 0.1 1 1 7.4e-07 0.00012 15.3 0.1 11 75 10 128 6 129 0.77 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 3_2 - 339 NACHT PF05729.7 166 0.00042 13.6 0.0 1 1 1e-05 0.0008 12.6 0.0 2 21 38 57 37 67 0.87 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_6 - 253 NACHT PF05729.7 166 0.00099 12.3 0.9 1 1 5e-05 0.0039 10.4 0.1 3 31 101 129 99 216 0.89 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_2 - 339 AAA_25 PF13481.1 194 2.6e-06 20.5 0.1 1 2 5.7e-07 3e-05 17.0 0.0 29 54 32 57 4 60 0.80 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_2 - 339 AAA_25 PF13481.1 194 2.6e-06 20.5 0.1 2 2 0.044 2.3 1.1 0.0 134 188 166 215 126 216 0.66 # 315 # 1331 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_6 - 253 AAA_25 PF13481.1 194 2.4e-05 17.3 0.1 1 2 8.7e-06 0.00046 13.2 0.0 28 58 93 123 78 137 0.87 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 5_6 - 253 AAA_25 PF13481.1 194 2.4e-05 17.3 0.1 2 2 0.037 1.9 1.3 0.0 132 150 149 167 131 171 0.83 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 3_3 - 320 AAA_25 PF13481.1 194 0.001 12.0 0.1 1 2 0.00028 0.015 8.2 0.0 30 50 38 58 30 107 0.91 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 3_3 - 320 AAA_25 PF13481.1 194 0.001 12.0 0.1 2 2 0.036 1.9 1.4 0.0 165 188 190 213 161 214 0.80 # 1328 # 2287 # 1 # ID=3_3;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.352 2_11 - 1026 SNF2_N PF00176.18 299 8.3e-10 31.4 0.4 1 2 5.2e-12 8.3e-10 31.4 0.4 2 174 268 449 204 459 0.78 # 10770 # 13847 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.379 2_11 - 1026 SNF2_N PF00176.18 299 8.3e-10 31.4 0.4 2 2 0.073 12 -1.9 1.3 223 296 771 852 730 854 0.64 # 10770 # 13847 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.379 5_6 - 253 AAA_5 PF07728.9 139 0.00081 12.7 0.7 1 2 0.052 8.2 -0.3 0.1 65 95 30 60 2 82 0.65 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 5_6 - 253 AAA_5 PF07728.9 139 0.00081 12.7 0.7 2 2 3.5e-05 0.0056 10.0 0.1 1 33 100 133 100 194 0.59 # 3218 # 3976 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.358 5_12 - 270 APS_kinase PF01583.15 157 0.0011 12.2 0.0 1 2 4.4e-05 0.0069 9.6 0.0 10 41 10 41 2 91 0.73 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_12 - 270 APS_kinase PF01583.15 157 0.0011 12.2 0.0 2 2 0.054 8.6 -0.5 0.0 69 89 135 155 132 167 0.86 # 7995 # 8804 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/6830ea98-63a0-45d9-baf1-ad81ec83a87b # Target file: checkm_output/bins/pGCA_002078495.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002078495.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6830ea98-63a0-45d9-baf1-ad81ec83a87b checkm_output/bins/pGCA_002078495.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:48:14 2020 # [ok]