# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 9_6 - 270 Methyltransf_32 PF13679.1 141 0.00068 13.3 0.0 1 2 0.0028 0.61 3.8 0.0 32 77 11 56 4 97 0.84 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 9_6 - 270 Methyltransf_32 PF13679.1 141 0.00068 13.3 0.0 2 2 0.00022 0.048 7.3 0.0 23 50 169 195 158 224 0.79 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 6_4 - 532 UPF0020 PF01170.13 180 4.3e-05 17.1 0.0 1 1 4.1e-07 8.9e-05 16.1 0.0 31 120 219 306 202 314 0.78 # 3006 # 4601 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.397 2_16 - 339 cobW PF02492.14 178 0.0013 12.2 0.3 1 1 3.3e-05 0.007 9.8 0.3 2 121 38 170 37 205 0.61 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 9_3 - 223 Saccharop_dh PF03435.13 386 0.00096 12.1 0.0 1 1 6.9e-06 0.0015 11.5 0.0 1 43 10 50 10 87 0.84 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 2_16 - 339 ABC_ATPase PF09818.4 448 0.00016 14.3 1.6 1 2 5.1e-05 0.011 8.3 0.0 240 264 31 56 11 61 0.89 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 ABC_ATPase PF09818.4 448 0.00016 14.3 1.6 2 2 0.00082 0.18 4.3 0.4 322 413 156 232 141 257 0.68 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 IstB_IS21 PF01695.12 178 0.00097 12.6 0.0 1 1 1.1e-05 0.0024 11.3 0.0 44 67 33 56 23 61 0.90 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 9_6 - 270 MipZ PF09140.6 261 8.1e-12 38.7 0.0 1 1 1.7e-11 1.2e-09 31.5 0.0 3 132 4 155 2 177 0.66 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_12 - 232 MipZ PF09140.6 261 2.9e-09 30.3 0.1 1 1 8.8e-11 6.3e-09 29.2 0.1 6 107 50 163 45 182 0.67 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 5_4 - 263 MipZ PF09140.6 261 1e-08 28.5 0.0 1 1 3.3e-10 2.4e-08 27.3 0.0 2 131 3 147 2 153 0.63 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 9_6 - 270 YhjQ PF06564.7 244 1.1e-11 38.4 0.0 1 1 2.4e-13 1.7e-11 37.9 0.0 1 150 1 154 1 200 0.78 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_4 - 263 YhjQ PF06564.7 244 1.4e-09 31.7 0.0 1 1 2.6e-11 1.9e-09 31.2 0.0 1 148 1 145 1 159 0.83 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 5_12 - 232 YhjQ PF06564.7 244 0.00081 12.7 0.0 1 1 1.6e-05 0.0011 12.3 0.0 13 132 56 169 50 206 0.73 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_18 - 313 3HCDH_N PF02737.13 180 0.00015 15.5 0.1 1 1 5.1e-06 0.00036 14.2 0.1 1 40 2 41 2 64 0.87 # 12766 # 13704 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408 9_3 - 223 3HCDH_N PF02737.13 180 0.00034 14.3 0.0 1 1 7.5e-06 0.00054 13.6 0.0 2 45 10 53 9 70 0.89 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 5_12 - 232 3HCDH_N PF02737.13 180 0.0012 12.5 0.4 1 2 0.0013 0.096 6.3 0.0 6 31 57 82 54 123 0.86 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 5_12 - 232 3HCDH_N PF02737.13 180 0.0012 12.5 0.4 2 2 0.0056 0.4 4.3 0.1 146 172 181 207 177 213 0.88 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 8_5 - 146 Usp PF00582.21 140 1.9e-24 80.4 0.0 1 1 1e-26 2.2e-24 80.2 0.0 2 140 7 145 6 145 0.97 # 3258 # 3695 # -1 # ID=8_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.361 2_16 - 339 NB-ARC PF00931.17 287 0.00021 14.2 0.1 1 1 5.3e-06 0.00057 12.7 0.0 20 40 37 57 24 69 0.86 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_15 - 320 NB-ARC PF00931.17 287 0.0014 11.5 0.0 1 1 2e-05 0.0021 10.9 0.0 19 44 41 66 31 138 0.88 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_16 - 339 AAA_22 PF13401.1 131 1e-07 26.2 0.8 1 1 5.5e-08 3e-06 21.4 0.8 4 123 36 214 33 220 0.71 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_15 - 320 AAA_22 PF13401.1 131 0.00025 15.2 1.7 1 1 0.00012 0.0064 10.6 1.7 9 123 46 212 39 221 0.60 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 5_4 - 263 AAA_22 PF13401.1 131 0.00059 14.0 0.1 1 2 0.00037 0.02 9.1 0.0 14 61 12 54 5 128 0.81 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 5_4 - 263 AAA_22 PF13401.1 131 0.00059 14.0 0.1 2 2 0.036 1.9 2.6 0.0 17 63 154 208 152 255 0.76 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 6_5 - 1026 AAA_22 PF13401.1 131 0.0021 12.2 6.1 1 1 2.4e-05 0.0013 12.9 0.7 68 125 362 447 280 452 0.55 # 4601 # 7678 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.380 9_6 - 270 ATP_bind_1 PF03029.12 238 7.4e-05 16.3 0.1 1 1 2.4e-06 0.00051 13.6 0.1 6 99 12 130 10 137 0.67 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 2_15 - 320 PRK PF00485.13 194 0.00016 15.2 0.2 1 1 1.9e-06 0.0004 14.0 0.0 2 81 44 124 43 140 0.80 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 9_6 - 270 SRP54 PF00448.17 196 3.3e-05 17.4 0.7 1 1 1.5e-06 0.0001 15.7 0.1 10 40 11 41 1 46 0.84 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_12 - 232 SRP54 PF00448.17 196 0.0004 13.8 0.9 1 2 6.3e-05 0.0045 10.4 0.1 12 40 56 84 48 98 0.92 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 5_12 - 232 SRP54 PF00448.17 196 0.0004 13.8 0.9 2 2 0.027 1.9 1.8 0.1 73 91 144 162 119 222 0.80 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 5_4 - 263 SRP54 PF00448.17 196 0.00078 12.9 0.0 1 1 2.1e-05 0.0015 12.0 0.0 11 39 12 40 3 120 0.89 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 13_3 - 64 TIGR00855 TIGR00855 125 0.00045 14.3 0.5 1 1 2.1e-06 0.00045 14.3 0.5 61 97 12 46 1 61 0.74 # 2170 # 2361 # -1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.281 2_16 - 339 AAA_15 PF13175.1 415 6.5e-09 29.2 0.1 1 2 9.2e-05 0.0099 8.9 0.0 17 56 30 70 14 132 0.75 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 AAA_15 PF13175.1 415 6.5e-09 29.2 0.1 2 2 1.1e-07 1.1e-05 18.5 0.0 361 411 172 216 154 220 0.81 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_15 - 320 AAA_15 PF13175.1 415 2e-05 17.7 0.6 1 2 1.1e-05 0.0012 11.9 0.9 27 99 46 132 6 141 0.83 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 320 AAA_15 PF13175.1 415 2e-05 17.7 0.6 2 2 0.0046 0.5 3.3 0.0 370 410 173 213 162 218 0.81 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 9_3 - 223 NAD_binding_7 PF13241.1 103 2.6e-05 18.4 0.1 1 1 2.6e-07 5.5e-05 17.4 0.1 6 69 6 80 3 115 0.69 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 2_16 - 339 AAA_17 PF13207.1 121 0.00017 16.4 0.1 1 1 4e-06 0.00043 15.1 0.1 1 20 38 57 38 82 0.90 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_15 - 320 AAA_17 PF13207.1 121 0.019 9.8 3.9 1 1 0.00067 0.072 7.9 3.9 2 19 44 61 43 300 0.79 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_16 - 339 AAA_21 PF13304.1 303 1.4e-15 51.9 0.1 1 2 7.2e-06 0.00077 13.4 0.0 2 25 39 64 38 89 0.76 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 AAA_21 PF13304.1 303 1.4e-15 51.9 0.1 2 2 6e-13 6.5e-11 36.6 0.0 227 300 147 218 88 221 0.84 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_15 - 320 AAA_21 PF13304.1 303 1.9e-12 41.7 2.8 1 1 1.9e-13 2.1e-11 38.3 0.9 3 299 45 215 44 219 0.95 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_16 - 339 Miro PF08477.8 119 5.7e-05 17.6 0.2 1 1 7.4e-07 0.00016 16.2 0.1 3 51 40 84 39 106 0.80 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 MobB PF03205.9 140 0.00022 14.9 0.0 1 1 4e-06 0.00043 14.0 0.0 2 48 38 83 37 124 0.72 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_4 - 263 MobB PF03205.9 140 0.00034 14.3 0.0 1 1 7.4e-06 0.00079 13.1 0.0 10 42 12 42 3 76 0.90 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_14 - 86 Ribosomal_L35p PF01632.14 61 0.002 12.1 0.7 1 1 9.1e-06 0.002 12.1 0.7 33 61 1 29 1 29 0.95 # 10136 # 10393 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 9_3 - 223 ADH_zinc_N PF00107.21 130 4.3e-05 17.1 0.1 1 2 0.0068 1.5 2.4 0.0 9 78 22 89 14 91 0.52 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 ADH_zinc_N PF00107.21 130 4.3e-05 17.1 0.1 2 2 4.5e-06 0.00096 12.7 0.0 7 47 90 130 86 140 0.85 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 3_10 - 128 CTP_transf_2 PF01467.21 157 1.1e-17 58.5 0.1 1 1 5.8e-20 1.2e-17 58.3 0.1 1 156 5 124 5 125 0.87 # 8291 # 8674 # -1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.310 3_15 - 78 Semialdhyde_dh PF01118.19 121 4.7e-05 17.7 0.0 1 1 2.2e-07 4.7e-05 17.7 0.0 1 35 3 36 3 76 0.73 # 11743 # 11976 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.303 9_6 - 270 ArsA_ATPase PF02374.10 305 3e-14 46.7 0.4 1 1 7.7e-16 5.5e-14 45.8 0.0 5 137 6 132 1 137 0.79 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_4 - 263 ArsA_ATPase PF02374.10 305 1.8e-12 40.8 0.0 1 1 5.3e-14 3.8e-12 39.8 0.0 2 83 2 94 1 119 0.74 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 5_12 - 232 ArsA_ATPase PF02374.10 305 1.8e-06 21.2 0.8 1 2 2.6e-07 1.8e-05 17.8 0.1 12 38 56 82 45 106 0.86 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 5_12 - 232 ArsA_ATPase PF02374.10 305 1.8e-06 21.2 0.8 2 2 0.024 1.7 1.5 0.0 109 135 135 163 101 164 0.81 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 2_16 - 339 PhoH PF02562.11 205 5.1e-05 16.5 0.0 1 2 5.8e-06 0.0013 12.0 0.0 16 70 33 91 19 127 0.67 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 PhoH PF02562.11 205 5.1e-05 16.5 0.0 2 2 0.0058 1.2 2.2 0.0 92 117 297 322 258 326 0.81 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_12 - 232 AAA_26 PF13500.1 199 8.3e-08 26.0 0.3 1 2 4.3e-06 0.00093 12.8 0.0 2 32 46 76 45 135 0.94 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 5_12 - 232 AAA_26 PF13500.1 199 8.3e-08 26.0 0.3 2 2 1e-05 0.0022 11.6 0.1 113 172 162 221 156 227 0.88 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 9_3 - 223 Shikimate_DH PF01488.15 135 1e-05 19.6 0.4 1 1 1.3e-07 2.9e-05 18.2 0.1 11 76 6 70 1 106 0.79 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 F420_oxidored PF03807.12 96 1.8e-07 25.5 0.1 1 2 5.7e-08 6.1e-06 20.6 0.0 2 60 10 65 9 85 0.82 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 F420_oxidored PF03807.12 96 1.8e-07 25.5 0.1 2 2 0.018 2 3.0 0.0 41 69 184 211 125 222 0.86 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 1_18 - 313 F420_oxidored PF03807.12 96 0.0002 15.8 0.1 1 1 1.2e-05 0.0013 13.1 0.1 1 88 2 97 2 104 0.84 # 12766 # 13704 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408 9_3 - 223 FAD_binding_3 PF01494.14 356 0.0008 12.5 0.0 1 1 6e-06 0.0013 11.8 0.0 3 39 9 45 7 71 0.86 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 2_16 - 339 SMC_N PF02463.14 220 3e-10 33.6 0.1 1 1 7.1e-12 7.6e-10 32.3 0.1 26 213 38 231 27 238 0.83 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_15 - 320 SMC_N PF02463.14 220 1.2e-07 25.1 0.5 1 1 2.1e-09 2.2e-07 24.3 0.5 26 213 43 229 30 235 0.76 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 5_4 - 263 VirC1 PF07015.6 231 1.2e-06 21.7 0.0 1 1 2.4e-08 2.6e-06 20.6 0.0 1 64 1 69 1 82 0.78 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 9_6 - 270 VirC1 PF07015.6 231 4e-05 16.7 0.0 1 1 6.3e-07 6.8e-05 16.0 0.0 1 46 1 46 1 80 0.89 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 3_10 - 128 FAD_syn PF06574.7 158 1.4e-05 18.8 0.1 1 1 3.3e-07 7.1e-05 16.5 0.1 7 34 2 29 1 102 0.88 # 8291 # 8674 # -1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.310 5_12 - 232 Fer4_NifH PF00142.13 273 3.2e-06 20.5 1.5 1 1 1e-07 7.2e-06 19.3 0.1 11 67 56 112 48 129 0.89 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 5_4 - 263 Fer4_NifH PF00142.13 273 9.8e-05 15.6 0.2 1 2 3.4e-05 0.0025 11.0 0.0 8 62 10 64 3 77 0.75 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 5_4 - 263 Fer4_NifH PF00142.13 273 9.8e-05 15.6 0.2 2 2 0.015 1.1 2.3 0.1 182 239 186 243 171 261 0.74 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 9_6 - 270 Fer4_NifH PF00142.13 273 0.00014 15.1 0.4 1 2 0.0017 0.12 5.4 0.0 8 41 10 43 3 58 0.87 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 9_6 - 270 Fer4_NifH PF00142.13 273 0.00014 15.1 0.4 2 2 0.00038 0.027 7.6 0.1 183 240 194 251 182 268 0.80 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 2_16 - 339 AAA_16 PF13191.1 185 3.7e-05 17.8 0.7 1 1 2.8e-07 6e-05 17.1 0.7 19 45 31 57 23 245 0.92 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 AAA_23 PF13476.1 202 0.00014 16.2 0.1 1 1 6.9e-06 0.0003 15.1 0.1 15 40 29 57 20 95 0.80 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 11_6 - 190 AAA_23 PF13476.1 202 0.0004 14.7 16.9 1 1 1.3e-05 0.00057 14.2 16.9 87 202 38 171 2 171 0.50 # 3494 # 4063 # -1 # ID=11_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.330 7_2 - 161 AAA_23 PF13476.1 202 0.00083 13.7 8.8 1 1 2.3e-05 0.00098 13.4 8.8 89 198 39 154 9 158 0.52 # 698 # 1180 # 1 # ID=7_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.296 11_3 - 162 AAA_23 PF13476.1 202 0.001 13.4 11.6 1 1 3e-05 0.0013 13.1 11.6 90 197 40 153 5 157 0.49 # 908 # 1393 # 1 # ID=11_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.286 1_9 - 137 AAA_23 PF13476.1 202 0.078 7.2 21.0 1 1 0.0023 0.097 6.9 21.0 104 202 17 118 2 127 0.56 # 5293 # 5703 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.314 2_15 - 320 AAA_18 PF13238.1 129 3.2e-05 18.2 0.5 1 1 6.6e-07 7.1e-05 17.1 0.1 1 72 44 130 44 150 0.68 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_16 - 339 AAA_18 PF13238.1 129 0.00068 14.0 1.7 1 2 3.3e-05 0.0036 11.6 0.1 2 19 40 57 39 90 0.78 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 AAA_18 PF13238.1 129 0.00068 14.0 1.7 2 2 0.063 6.8 1.0 0.0 43 81 179 215 103 244 0.77 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_9 - 313 adh_short PF00106.20 167 8.4e-07 23.0 0.3 1 1 1.2e-06 0.00013 15.9 0.3 3 142 3 126 2 131 0.77 # 7243 # 8181 # -1 # ID=3_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_15 - 78 adh_short PF00106.20 167 0.0025 11.7 0.0 1 1 2.4e-05 0.0025 11.7 0.0 3 34 4 35 2 57 0.86 # 11743 # 11976 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.303 2_16 - 339 AAA_13 PF13166.1 712 0.00054 12.5 0.1 1 2 0.0052 0.56 2.5 0.0 21 40 41 60 33 90 0.77 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 AAA_13 PF13166.1 712 0.00054 12.5 0.1 2 2 0.00012 0.013 7.9 0.0 527 579 174 225 168 253 0.89 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 10_2 - 211 AAA_13 PF13166.1 712 0.052 5.9 28.3 1 1 0.00072 0.077 5.3 28.2 284 438 32 194 17 203 0.76 # 1200 # 1832 # 1 # ID=10_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.306 9_3 - 223 GFO_IDH_MocA PF01408.17 120 0.00051 14.6 0.0 1 1 6e-06 0.0013 13.3 0.0 2 83 9 92 8 99 0.74 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 5_4 - 263 CbiA PF01656.18 195 1e-27 90.8 0.0 1 1 2.4e-29 1.3e-27 90.4 0.0 1 182 4 209 4 225 0.74 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 9_6 - 270 CbiA PF01656.18 195 1.2e-27 90.5 0.2 1 1 4.9e-29 2.7e-27 89.4 0.2 1 178 4 214 4 254 0.75 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_12 - 232 CbiA PF01656.18 195 5.6e-19 62.3 1.0 1 1 1.1e-20 5.9e-19 62.2 0.3 4 162 50 221 47 227 0.75 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 2_16 - 339 CbiA PF01656.18 195 0.00019 14.9 1.2 1 2 0.00086 0.046 7.1 0.1 4 21 41 58 38 66 0.84 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 CbiA PF01656.18 195 0.00019 14.9 1.2 2 2 0.0012 0.066 6.6 0.1 111 169 169 226 154 253 0.83 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_9 - 313 Polysacc_synt_2 PF02719.10 294 3.2e-15 49.7 0.6 1 1 1.7e-16 3.6e-14 46.3 0.6 1 248 3 258 3 287 0.77 # 7243 # 8181 # -1 # ID=3_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 6_4 - 532 Methyltransf_25 PF13649.1 101 0.002 12.5 0.0 1 2 0.00027 0.058 7.8 0.0 2 74 221 306 220 341 0.76 # 3006 # 4601 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.397 6_4 - 532 Methyltransf_25 PF13649.1 101 0.002 12.5 0.0 2 2 0.041 8.9 0.8 0.0 42 76 436 486 389 528 0.50 # 3006 # 4601 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.397 9_6 - 270 AAA_14 PF13173.1 128 6.7e-06 20.0 2.3 1 1 6.4e-08 1.4e-05 19.0 0.9 12 109 12 100 6 119 0.65 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 9_3 - 223 HI0933_like PF03486.9 409 0.0014 11.1 0.1 1 2 1.6e-05 0.0034 9.8 0.1 2 40 9 47 8 49 0.94 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 HI0933_like PF03486.9 409 0.0014 11.1 0.1 2 2 0.06 13 -2.0 0.0 117 166 167 214 126 215 0.51 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 2_16 - 339 AAA_29 PF13555.1 62 4.2e-07 23.4 0.1 1 1 7.3e-09 7.9e-07 22.6 0.1 21 51 34 64 20 68 0.77 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_15 - 320 AAA_29 PF13555.1 62 1.8e-05 18.2 0.4 1 1 3.4e-07 3.6e-05 17.3 0.4 13 39 32 57 29 62 0.84 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_16 - 339 AAA PF00004.24 132 6.8e-06 20.3 0.3 1 2 2.4e-05 0.0051 11.0 0.0 3 44 41 84 39 108 0.78 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 AAA PF00004.24 132 6.8e-06 20.3 0.3 2 2 0.00068 0.15 6.3 0.0 82 117 146 180 131 195 0.85 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 3_9 - 313 KR PF08659.5 181 4.7e-05 17.1 0.0 1 2 5.5e-05 0.012 9.3 0.0 3 34 3 34 2 61 0.83 # 7243 # 8181 # -1 # ID=3_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_9 - 313 KR PF08659.5 181 4.7e-05 17.1 0.0 2 2 0.0007 0.15 5.7 0.0 96 145 79 128 72 135 0.85 # 7243 # 8181 # -1 # ID=3_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 2_15 - 320 Sigma54_activat PF00158.21 168 0.00066 13.2 0.3 1 2 9.1e-05 0.02 8.4 0.1 19 54 38 73 23 88 0.82 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 320 Sigma54_activat PF00158.21 168 0.00066 13.2 0.3 2 2 0.0047 1 2.8 0.0 78 118 155 198 149 230 0.83 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 320 MMR_HSR1 PF01926.18 116 7.6e-05 16.7 0.2 1 1 1.5e-06 0.00016 15.6 0.1 2 61 44 147 43 208 0.68 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_16 - 339 MMR_HSR1 PF01926.18 116 0.0023 11.9 0.6 1 1 3.6e-05 0.0039 11.2 0.6 2 21 39 58 38 247 0.89 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 6_4 - 532 N6_Mtase PF02384.11 311 7.7e-121 396.9 0.0 1 1 5.1e-123 1.1e-120 396.3 0.0 2 310 168 476 167 477 0.98 # 3006 # 4601 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.397 2_16 - 339 DUF258 PF03193.11 161 2e-05 17.8 0.1 1 1 3.1e-07 3.3e-05 17.1 0.1 21 62 21 63 2 90 0.75 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_15 - 320 DUF258 PF03193.11 161 0.00041 13.6 0.2 1 1 6.9e-06 0.00074 12.7 0.2 33 65 38 71 17 93 0.80 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 9_3 - 223 NAD_binding_2 PF03446.10 163 6.5e-09 29.8 0.3 1 1 1e-10 1.1e-08 29.1 0.1 2 95 8 107 7 119 0.85 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 1_18 - 313 NAD_binding_2 PF03446.10 163 9.5e-06 19.5 0.5 1 1 2e-07 2.1e-05 18.4 0.1 2 62 1 61 1 100 0.82 # 12766 # 13704 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408 5_12 - 232 AAA_31 PF13614.1 157 1.3e-25 84.2 0.1 1 1 2.2e-27 1.6e-25 83.9 0.1 2 153 46 190 45 194 0.95 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 9_6 - 270 AAA_31 PF13614.1 157 4.5e-17 56.4 0.0 1 1 2.5e-18 1.8e-16 54.4 0.0 2 151 3 154 2 159 0.86 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 5_4 - 263 AAA_31 PF13614.1 157 1.3e-08 28.9 0.1 1 1 3.3e-10 2.4e-08 28.0 0.1 1 98 2 98 2 150 0.63 # 959 # 1747 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288 2_16 - 339 AAA_33 PF13671.1 143 0.00026 14.9 0.0 1 1 2.2e-06 0.00048 14.0 0.0 1 22 38 59 38 166 0.71 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 9_6 - 270 KTI12 PF08433.5 270 0.00022 14.4 0.0 1 2 3.3e-06 0.00072 12.8 0.0 12 50 13 58 10 85 0.78 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 9_6 - 270 KTI12 PF08433.5 270 0.00022 14.4 0.0 2 2 0.084 18 -1.7 0.0 10 21 178 189 177 208 0.88 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 6_4 - 532 Methyltransf_26 PF13659.1 117 1.7e-13 44.6 0.0 1 1 1.9e-15 4e-13 43.4 0.0 2 116 218 353 217 354 0.78 # 3006 # 4601 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.397 1_18 - 313 NAD_Gly3P_dh_N PF01210.18 157 8.2e-10 32.6 0.1 1 1 1.3e-11 1.4e-09 31.9 0.1 1 118 2 113 2 141 0.83 # 12766 # 13704 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408 9_3 - 223 NAD_Gly3P_dh_N PF01210.18 157 0.00031 14.5 0.0 1 2 1.7e-05 0.0019 11.9 0.0 2 41 10 49 9 56 0.91 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 NAD_Gly3P_dh_N PF01210.18 157 0.00031 14.5 0.0 2 2 0.085 9.2 -0.0 0.0 38 76 172 210 147 221 0.71 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 2-Hacid_dh_C PF02826.14 178 3.8e-06 20.1 0.0 1 2 5.5e-08 1.2e-05 18.5 0.0 35 75 6 46 1 66 0.84 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 2-Hacid_dh_C PF02826.14 178 3.8e-06 20.1 0.0 2 2 0.089 19 -1.7 0.0 57 97 177 209 165 212 0.64 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 XdhC_C PF13478.1 136 1.1e-05 19.8 0.0 1 1 1.3e-07 2.8e-05 18.4 0.0 1 83 10 100 10 116 0.79 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 7_2 - 161 Ribosomal_S15 PF00312.17 83 0.00062 13.5 2.3 1 1 9.5e-06 0.002 11.9 2.3 18 66 104 158 91 160 0.76 # 698 # 1180 # 1 # ID=7_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.296 7_9 - 161 RNA_pol_Rpb1_3 PF04983.13 158 0.00027 14.7 3.5 1 1 2.5e-06 0.00053 13.7 3.5 72 151 64 143 5 146 0.75 # 4606 # 5088 # -1 # ID=7_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.253 1_18 - 313 ApbA PF02558.11 151 8.2e-42 136.2 0.2 1 1 1.2e-43 1.2e-41 135.6 0.2 1 148 3 151 3 153 0.98 # 12766 # 13704 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408 9_3 - 223 ApbA PF02558.11 151 9.6e-07 22.3 0.0 1 2 1.2e-07 1.2e-05 18.7 0.0 1 40 10 50 10 103 0.77 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 ApbA PF02558.11 151 9.6e-07 22.3 0.0 2 2 0.023 2.5 1.5 0.0 67 99 177 209 142 211 0.87 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 6_4 - 532 MTS PF05175.9 170 0.00031 14.1 0.0 1 1 2.9e-06 0.00063 13.1 0.0 52 140 239 352 211 363 0.71 # 3006 # 4601 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.397 1_2 - 63 CoA_binding_3 PF13727.1 175 0.0011 12.8 1.2 1 1 5.1e-06 0.0011 12.8 1.2 25 58 11 45 1 52 0.76 # 165 # 353 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.212 9_3 - 223 ELFV_dehydrog PF00208.16 244 0.00029 14.4 0.2 1 2 4e-06 0.00086 12.9 0.0 31 63 6 37 1 52 0.87 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 ELFV_dehydrog PF00208.16 244 0.00029 14.4 0.2 2 2 0.055 12 -0.7 0.0 187 187 152 152 61 212 0.58 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 2_15 - 320 ABC_tran PF00005.22 137 6.8e-35 114.3 0.1 1 1 1.1e-36 1.2e-34 113.5 0.1 2 136 32 182 31 183 0.93 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_16 - 339 ABC_tran PF00005.22 137 3.3e-32 105.7 0.1 1 1 6.5e-34 7e-32 104.6 0.0 3 136 28 184 26 185 0.93 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 6_4 - 532 Eco57I PF07669.6 106 1.2e-06 22.9 0.1 1 1 3.5e-08 7.4e-06 20.3 0.0 2 104 292 403 291 405 0.87 # 3006 # 4601 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.397 3_9 - 313 NAD_binding_4 PF07993.7 249 1.3e-09 31.3 0.4 1 2 0.00036 0.076 5.8 0.1 3 41 7 44 5 60 0.80 # 7243 # 8181 # -1 # ID=3_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_9 - 313 NAD_binding_4 PF07993.7 249 1.3e-09 31.3 0.4 2 2 1.1e-09 2.3e-07 23.9 0.0 78 244 59 218 58 223 0.78 # 7243 # 8181 # -1 # ID=3_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 1_18 - 313 UDPG_MGDP_dh_N PF03721.9 185 1.2e-06 22.1 0.1 1 1 1.7e-08 1.8e-06 21.4 0.1 1 100 1 94 1 115 0.79 # 12766 # 13704 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408 9_3 - 223 UDPG_MGDP_dh_N PF03721.9 185 1.7e-05 18.3 0.1 1 1 3.6e-07 3.9e-05 17.1 0.1 2 57 9 66 8 80 0.87 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 5_12 - 232 AAA_19 PF13245.1 76 0.00054 13.7 0.0 1 1 1e-05 0.0022 11.8 0.0 17 48 52 79 40 85 0.84 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 3_9 - 313 RmlD_sub_bind PF04321.12 287 6.2e-11 35.6 0.0 1 1 7.9e-13 8.5e-11 35.2 0.0 1 176 1 204 1 260 0.76 # 7243 # 8181 # -1 # ID=3_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_15 - 78 RmlD_sub_bind PF04321.12 287 2.6e-06 20.5 0.0 1 1 2.5e-08 2.7e-06 20.4 0.0 2 37 3 38 1 55 0.76 # 11743 # 11976 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.303 3_9 - 313 NAD_binding_10 PF13460.1 183 5e-11 36.9 0.0 1 1 3e-13 6.5e-11 36.5 0.0 1 149 3 177 3 229 0.73 # 7243 # 8181 # -1 # ID=3_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 2_16 - 339 AAA_10 PF12846.2 304 2.9e-06 20.8 0.2 1 2 1.8e-05 0.0019 11.6 0.1 4 21 39 56 37 71 0.85 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 AAA_10 PF12846.2 304 2.9e-06 20.8 0.2 2 2 0.00037 0.039 7.3 0.0 216 268 170 222 131 249 0.74 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_15 - 320 AAA_10 PF12846.2 304 0.0004 13.8 0.5 1 2 2e-05 0.0022 11.4 0.3 6 32 46 73 42 139 0.72 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 320 AAA_10 PF12846.2 304 0.0004 13.8 0.5 2 2 0.054 5.8 0.2 0.0 215 265 167 217 137 235 0.79 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 3_9 - 313 3Beta_HSD PF01073.14 280 3.3e-15 49.4 0.9 1 1 6.7e-17 1.4e-14 47.4 0.9 1 226 4 224 4 229 0.64 # 7243 # 8181 # -1 # ID=3_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 6_5 - 1026 ResIII PF04851.10 184 2.4e-44 145.3 2.9 1 2 1.1e-46 2.4e-44 145.3 2.9 2 183 262 448 261 449 0.95 # 4601 # 7678 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.380 6_5 - 1026 ResIII PF04851.10 184 2.4e-44 145.3 2.9 2 2 0.077 16 -0.8 5.7 68 156 750 851 734 875 0.75 # 4601 # 7678 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.380 6_4 - 532 Methyltransf_31 PF13847.1 152 0.0012 12.5 0.0 1 1 2.2e-05 0.0048 10.5 0.0 6 83 219 302 214 330 0.86 # 3006 # 4601 # -1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.397 3_9 - 313 Epimerase PF01370.16 236 1.7e-48 159.1 0.1 1 1 1.9e-50 2e-48 158.8 0.1 1 236 3 239 3 239 0.92 # 7243 # 8181 # -1 # ID=3_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.319 3_15 - 78 Epimerase PF01370.16 236 0.0005 13.5 0.0 1 1 5.1e-06 0.00054 13.4 0.0 1 35 4 39 4 56 0.76 # 11743 # 11976 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.303 6_5 - 1026 DEAD PF00270.24 169 1e-11 38.6 0.6 1 1 4.7e-14 1e-11 38.6 0.6 3 162 267 447 265 454 0.70 # 4601 # 7678 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.380 9_3 - 223 Pyr_redox PF00070.22 80 0.00029 15.2 0.8 1 2 8.2e-05 0.018 9.5 0.0 1 32 9 40 9 69 0.88 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 Pyr_redox PF00070.22 80 0.00029 15.2 0.8 2 2 0.007 1.5 3.3 0.0 17 65 92 145 83 158 0.70 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 2_16 - 339 Sigma54_activ_2 PF14532.1 138 0.00037 14.6 0.0 1 2 8.9e-05 0.019 9.0 0.0 20 50 35 65 21 88 0.79 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 Sigma54_activ_2 PF14532.1 138 0.00037 14.6 0.0 2 2 0.012 2.5 2.1 0.0 73 96 289 312 269 320 0.85 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_12 - 232 ParA PF10609.4 81 0.00068 13.5 0.2 1 1 8.5e-06 0.0018 12.2 0.2 2 60 156 213 155 218 0.87 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 3_15 - 78 DapB_N PF01113.15 124 6.7e-05 16.8 0.0 1 1 3.1e-07 6.7e-05 16.8 0.0 2 38 3 42 2 70 0.75 # 11743 # 11976 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.303 7_2 - 161 AAA_32 PF13654.1 509 0.0018 10.9 5.7 1 1 1e-05 0.0022 10.7 5.7 137 242 56 157 35 159 0.84 # 698 # 1180 # 1 # ID=7_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.296 3_15 - 78 Ldh_1_N PF00056.18 141 0.00082 13.2 0.0 1 1 4e-06 0.00085 13.1 0.0 2 27 3 28 2 57 0.82 # 11743 # 11976 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.303 9_3 - 223 TrkA_N PF02254.13 116 3.2e-27 88.9 0.2 1 1 1e-28 1.1e-26 87.2 0.1 1 116 10 125 10 125 0.96 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 1_18 - 313 TrkA_N PF02254.13 116 9.8e-05 16.4 0.4 1 1 2.9e-06 0.00031 14.7 0.1 1 44 3 46 3 55 0.90 # 12766 # 13704 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408 9_3 - 223 IlvN PF07991.7 165 2.1e-05 17.9 0.1 1 2 4.2e-07 9e-05 15.9 0.0 4 46 7 49 4 69 0.91 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_3 - 223 IlvN PF07991.7 165 2.1e-05 17.9 0.1 2 2 0.048 10 -0.6 0.0 45 69 137 161 107 211 0.58 # 2911 # 3579 # 1 # ID=9_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.327 9_6 - 270 AAA_24 PF13479.1 213 6e-05 16.7 0.1 1 1 7.4e-07 0.00016 15.3 0.1 11 75 10 128 6 129 0.77 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 2_16 - 339 NACHT PF05729.7 166 0.00057 13.6 0.0 1 1 5.1e-06 0.0011 12.6 0.0 2 21 38 57 37 67 0.87 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 AAA_25 PF13481.1 194 3.5e-06 20.5 0.1 1 2 5.7e-07 4.1e-05 17.0 0.0 29 54 32 57 4 60 0.80 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 2_16 - 339 AAA_25 PF13481.1 194 3.5e-06 20.5 0.1 2 2 0.044 3.1 1.1 0.0 134 188 166 215 126 216 0.66 # 12613 # 13629 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.381 5_12 - 232 AAA_25 PF13481.1 194 9.9e-05 15.8 0.0 1 1 2e-06 0.00014 15.2 0.0 35 150 47 162 35 191 0.74 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 2_15 - 320 AAA_25 PF13481.1 194 0.0014 12.0 0.1 1 2 0.00028 0.02 8.2 0.0 30 50 38 58 30 107 0.91 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 2_15 - 320 AAA_25 PF13481.1 194 0.0014 12.0 0.1 2 2 0.036 2.5 1.4 0.0 165 188 190 213 161 214 0.80 # 11657 # 12616 # -1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.354 6_5 - 1026 SNF2_N PF00176.18 299 1.1e-09 31.4 0.4 1 1 5.1e-12 1.1e-09 31.4 0.4 2 174 268 449 204 458 0.78 # 4601 # 7678 # -1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.380 5_12 - 232 APS_kinase PF01583.15 157 7.7e-05 16.4 0.0 1 1 1.1e-06 0.00012 15.8 0.0 10 56 53 97 44 170 0.79 # 7524 # 8219 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 9_6 - 270 APS_kinase PF01583.15 157 0.0015 12.2 0.0 1 1 8.8e-05 0.0094 9.6 0.0 10 41 10 41 2 91 0.73 # 4782 # 5591 # -1 # ID=9_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.284 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/23350324-71eb-4951-ad3c-f4bbe0f1c504 # Target file: checkm_output/bins/pGCA_002078415.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002078415.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/23350324-71eb-4951-ad3c-f4bbe0f1c504 checkm_output/bins/pGCA_002078415.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:48:12 2020 # [ok]