# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_24 - 578 Thymidylate_kin PF02223.12 186 1.9e-05 15.7 0.0 1 2 0.00031 0.012 6.5 0.0 3 46 20 63 18 84 0.74 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 Thymidylate_kin PF02223.12 186 1.9e-05 15.7 0.0 2 2 0.00031 0.012 6.5 0.1 5 33 335 364 333 416 0.85 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 IstB_IS21 PF01695.12 178 3.9e-09 27.8 0.3 1 2 1.4e-06 5.6e-05 14.2 0.0 49 83 15 49 8 57 0.89 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 IstB_IS21 PF01695.12 178 3.9e-09 27.8 0.3 2 2 1.4e-05 0.00056 11.0 0.0 46 85 324 363 314 379 0.73 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 MipZ PF09140.6 261 6.4e-11 33.3 6.0 1 3 1.9e-06 3.9e-05 14.4 0.0 8 39 20 51 15 68 0.87 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 MipZ PF09140.6 261 6.4e-11 33.3 6.0 2 3 0.0064 0.13 2.9 0.0 79 112 119 154 89 166 0.64 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 MipZ PF09140.6 261 6.4e-11 33.3 6.0 3 3 3.1e-06 6.1e-05 13.7 3.1 3 113 328 454 326 469 0.56 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_8 - 269 MipZ PF09140.6 261 3e-09 27.9 0.9 1 1 4.3e-09 8.5e-08 23.1 0.9 2 131 3 153 2 169 0.62 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_8 - 269 YhjQ PF06564.7 244 5.5e-12 37.1 0.0 1 1 3.9e-13 7.8e-12 36.6 0.0 1 149 1 152 1 169 0.82 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_24 - 578 YhjQ PF06564.7 244 3.9e-07 21.2 0.4 1 2 2.6e-07 5.2e-06 17.5 0.0 10 124 21 147 15 181 0.63 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 YhjQ PF06564.7 244 3.9e-07 21.2 0.4 2 2 0.076 1.5 -0.4 0.0 10 40 334 364 328 381 0.77 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_28 - 455 3HCDH_N PF02737.13 180 3.2e-07 21.7 0.0 1 1 1.8e-08 7.3e-07 20.6 0.0 1 31 154 184 154 226 0.90 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 GIDA PF01134.17 392 2.7e-07 21.3 0.0 1 3 0.00019 0.0078 6.6 0.0 1 52 5 57 5 67 0.76 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 GIDA PF01134.17 392 2.7e-07 21.3 0.0 2 3 0.051 2 -1.4 0.0 115 150 79 116 58 126 0.81 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 GIDA PF01134.17 392 2.7e-07 21.3 0.0 3 3 6.4e-06 0.00026 11.5 0.0 2 28 155 181 154 210 0.88 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 Pyr_redox_2 PF07992.9 201 2.6e-34 110.4 0.2 1 1 9.4e-36 3.7e-34 109.9 0.2 1 197 5 285 5 288 0.94 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 578 NB-ARC PF00931.17 287 3e-09 27.7 5.3 1 2 2.4e-05 0.00098 9.6 0.1 20 38 14 32 2 42 0.86 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 NB-ARC PF00931.17 287 3e-09 27.7 5.3 2 2 6.3e-08 2.5e-06 18.1 2.4 5 47 314 354 312 409 0.74 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_22 PF13401.1 131 5.1e-07 21.5 0.9 1 2 0.004 0.08 4.7 0.0 7 25 16 34 11 65 0.79 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_22 PF13401.1 131 5.1e-07 21.5 0.9 2 2 6.6e-06 0.00013 13.7 0.1 3 96 325 447 322 504 0.75 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_8 - 269 AAA_22 PF13401.1 131 8e-05 14.4 0.0 1 1 7.9e-06 0.00016 13.5 0.0 14 61 12 54 4 101 0.85 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_24 - 578 ATP_bind_1 PF03029.12 238 4.7e-08 24.4 2.7 1 2 2.4e-05 0.00098 10.3 0.2 2 37 19 54 18 64 0.93 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 ATP_bind_1 PF03029.12 238 4.7e-08 24.4 2.7 2 2 2.2e-06 8.8e-05 13.7 0.1 2 97 332 445 331 448 0.73 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 SRP54 PF00448.17 196 2.9e-10 31.5 11.8 1 3 3.8e-06 7.7e-05 13.8 0.2 3 38 15 50 13 54 0.93 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 SRP54 PF00448.17 196 2.9e-10 31.5 11.8 2 3 0.023 0.46 1.5 0.0 73 92 130 149 105 158 0.76 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 SRP54 PF00448.17 196 2.9e-10 31.5 11.8 3 3 1.6e-06 3.1e-05 15.1 5.6 2 90 327 415 326 466 0.80 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_8 - 269 SRP54 PF00448.17 196 9.7e-05 13.5 0.7 1 2 3.1e-05 0.00061 10.8 0.3 11 39 12 40 2 75 0.88 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_8 - 269 SRP54 PF00448.17 196 9.7e-05 13.5 0.7 2 2 0.047 0.93 0.5 0.0 71 91 108 128 49 130 0.76 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_28 - 455 NAD_binding_7 PF13241.1 103 2.2e-06 19.5 0.4 1 2 0.0032 0.13 4.3 0.0 6 45 2 53 1 111 0.67 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 NAD_binding_7 PF13241.1 103 2.2e-06 19.5 0.4 2 2 5.7e-06 0.00023 13.1 0.1 8 38 153 183 147 263 0.83 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 578 AAA_17 PF13207.1 121 7.8e-08 24.8 0.1 1 2 0.00041 0.017 7.6 0.0 3 18 17 32 16 70 0.88 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_17 PF13207.1 121 7.8e-08 24.8 0.1 2 2 3.1e-06 0.00012 14.5 0.0 2 62 328 401 327 457 0.49 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_3 - 227 AAA_21 PF13304.1 303 6.5e-05 14.6 0.2 1 1 2.7e-06 0.00011 13.9 0.0 3 81 9 87 7 122 0.85 # 783 # 1463 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_24 - 578 Miro PF08477.8 119 0.00095 11.3 3.5 1 3 0.038 1.5 1.0 0.1 5 18 19 32 16 51 0.86 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 Miro PF08477.8 119 0.00095 11.3 3.5 2 3 0.00013 0.0053 8.9 0.2 3 74 330 400 328 446 0.70 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 Miro PF08477.8 119 0.00095 11.3 3.5 3 3 0.1 4 -0.4 0.0 82 107 533 558 511 564 0.82 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 MobB PF03205.9 140 3.2e-08 25.0 1.2 1 2 8.8e-06 0.00018 12.9 0.0 3 38 16 50 14 56 0.89 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 MobB PF03205.9 140 3.2e-08 25.0 1.2 2 2 5.3e-05 0.0011 10.4 0.2 2 32 328 358 327 366 0.87 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_8 - 269 MobB PF03205.9 140 0.00015 13.1 0.1 1 1 2e-05 0.00041 11.7 0.1 10 46 12 46 2 77 0.85 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_24 - 578 LpxK PF02606.9 326 6.6e-05 13.5 0.2 1 2 0.00013 0.0052 7.3 0.0 46 73 22 49 20 95 0.88 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 LpxK PF02606.9 326 6.6e-05 13.5 0.2 2 2 0.002 0.079 3.4 0.1 46 69 335 358 330 370 0.89 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 ArsA_ATPase PF02374.10 305 1.5e-116 380.3 4.4 1 3 8.2e-77 1.6e-75 245.5 0.0 1 301 13 295 13 299 0.96 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 ArsA_ATPase PF02374.10 305 1.5e-116 380.3 4.4 2 3 1.9e-32 3.8e-31 99.8 1.1 2 150 327 462 326 474 0.90 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 ArsA_ATPase PF02374.10 305 1.5e-116 380.3 4.4 3 3 2.2e-12 4.4e-11 33.9 0.0 200 274 482 556 464 569 0.87 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_8 - 269 ArsA_ATPase PF02374.10 305 3.2e-14 44.2 0.3 1 1 2.9e-15 5.8e-14 43.4 0.2 1 140 1 134 1 237 0.83 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_24 - 578 PhoH PF02562.11 205 4.1e-10 30.8 0.7 1 2 3.6e-06 0.00015 12.7 0.0 16 59 10 53 3 68 0.86 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 PhoH PF02562.11 205 4.1e-10 30.8 0.7 2 2 4.3e-07 1.7e-05 15.7 0.2 17 58 323 365 315 417 0.72 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 T2SE PF00437.15 272 1.3e-09 28.9 1.0 1 2 5.8e-05 0.0023 8.4 0.0 125 164 10 49 3 74 0.78 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 T2SE PF00437.15 272 1.3e-09 28.9 1.0 2 2 4.6e-08 1.9e-06 18.6 0.3 52 159 223 357 182 370 0.78 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_3 - 227 Zeta_toxin PF06414.7 201 5.1e-17 53.2 0.3 1 1 2.2e-17 4.4e-16 50.2 0.3 15 192 4 164 2 173 0.86 # 783 # 1463 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_24 - 578 Zeta_toxin PF06414.7 201 4.7e-07 20.7 0.2 1 2 0.001 0.021 5.5 0.0 17 51 14 50 2 59 0.83 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 Zeta_toxin PF06414.7 201 4.7e-07 20.7 0.2 2 2 6.5e-06 0.00013 12.7 0.1 13 50 323 361 314 404 0.88 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_28 - 455 NAD_binding_8 PF13450.1 68 2.1e-06 19.3 0.1 1 2 0.00027 0.011 7.5 0.0 1 31 8 40 8 47 0.84 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 NAD_binding_8 PF13450.1 68 2.1e-06 19.3 0.1 2 2 8.7e-05 0.0035 9.1 0.0 1 31 157 187 157 194 0.92 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 FAD_binding_3 PF01494.14 356 6.5e-05 13.6 0.4 1 2 0.023 0.93 -0.0 0.1 119 156 67 104 53 116 0.77 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 FAD_binding_3 PF01494.14 356 6.5e-05 13.6 0.4 2 2 1.5e-05 0.00058 10.5 0.0 3 34 154 185 153 245 0.86 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_3 - 227 SMC_N PF02463.14 220 3.3e-05 14.8 0.4 1 2 2e-05 0.00078 10.3 0.0 24 57 5 36 3 103 0.69 # 783 # 1463 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_3 - 227 SMC_N PF02463.14 220 3.3e-05 14.8 0.4 2 2 0.0038 0.15 2.8 0.1 64 125 122 183 100 192 0.74 # 783 # 1463 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_8 - 269 VirC1 PF07015.6 231 3.6e-14 43.9 0.3 1 2 2.5e-11 4.9e-10 30.4 0.1 1 58 1 58 1 70 0.94 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_8 - 269 VirC1 PF07015.6 231 3.6e-14 43.9 0.3 2 2 1.1e-05 0.00021 12.0 0.0 75 114 112 151 96 250 0.78 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_24 - 578 VirC1 PF07015.6 231 2.2e-07 21.8 0.1 1 2 0.00011 0.0022 8.6 0.0 9 44 20 55 12 65 0.87 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 VirC1 PF07015.6 231 2.2e-07 21.8 0.1 2 2 2.7e-05 0.00055 10.6 0.0 4 47 328 371 325 416 0.90 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 Fer4_NifH PF00142.13 273 1.4e-12 38.9 0.6 1 2 9.9e-09 2e-07 22.0 0.0 5 41 18 54 14 69 0.89 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 Fer4_NifH PF00142.13 273 1.4e-12 38.9 0.6 2 2 2.1e-06 4.2e-05 14.4 0.2 3 42 329 368 326 412 0.77 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_8 - 269 Fer4_NifH PF00142.13 273 2.6e-10 31.5 0.5 1 2 1.3e-10 2.7e-09 28.1 0.1 8 73 10 75 2 85 0.95 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_8 - 269 Fer4_NifH PF00142.13 273 2.6e-10 31.5 0.5 2 2 0.018 0.36 1.5 0.0 202 245 212 259 182 266 0.72 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_24 - 578 Arch_ATPase PF01637.13 234 8.4e-06 17.2 0.0 1 2 0.057 2.3 -0.6 0.0 23 54 16 47 10 131 0.83 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 Arch_ATPase PF01637.13 234 8.4e-06 17.2 0.0 2 2 1.1e-06 4.4e-05 14.8 0.1 13 144 320 466 314 476 0.59 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_16 PF13191.1 185 9.2e-08 23.9 0.0 1 2 3.5e-05 0.0014 10.2 0.0 25 88 14 90 5 149 0.62 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_16 PF13191.1 185 9.2e-08 23.9 0.0 2 2 1.9e-05 0.00076 11.1 0.0 22 75 324 377 313 495 0.76 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_3 - 227 AAA_23 PF13476.1 202 9.5e-05 14.4 3.6 1 1 5.2e-06 0.00021 13.3 3.6 21 131 7 175 3 220 0.52 # 783 # 1463 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_24 - 578 AAA_18 PF13238.1 129 5e-08 24.9 0.1 1 2 0.00039 0.0078 8.2 0.0 2 22 17 37 16 67 0.77 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_18 PF13238.1 129 5e-08 24.9 0.1 2 2 7.4e-06 0.00015 13.7 0.0 4 80 332 446 329 454 0.73 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_8 - 269 AAA_18 PF13238.1 129 0.001 11.0 2.3 1 1 0.00057 0.011 7.6 2.3 22 88 55 136 10 176 0.70 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_24 - 578 SecA_DEAD PF07517.9 266 0.0024 8.7 5.8 1 2 0.0017 0.068 4.0 0.1 99 126 22 49 17 57 0.91 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 SecA_DEAD PF07517.9 266 0.0024 8.7 5.8 2 2 0.00096 0.038 4.8 2.6 98 128 334 364 314 453 0.76 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 CbiA PF01656.18 195 1.2e-29 94.7 0.7 1 2 1.8e-18 3.7e-17 54.0 0.0 4 161 18 245 15 278 0.73 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 CbiA PF01656.18 195 1.2e-29 94.7 0.7 2 2 7.6e-14 1.5e-12 38.9 0.2 1 109 328 453 328 484 0.65 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_8 - 269 CbiA PF01656.18 195 6.6e-29 92.3 0.0 1 1 4.2e-30 8.5e-29 91.9 0.0 1 158 4 195 4 228 0.72 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_24 - 578 KaiC PF06745.8 227 3e-05 14.8 0.2 1 2 0.00027 0.011 6.5 0.0 22 59 16 52 3 62 0.86 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 KaiC PF06745.8 227 3e-05 14.8 0.2 2 2 0.00038 0.015 6.0 0.0 19 64 326 369 309 445 0.82 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_14 PF13173.1 128 4.6e-05 15.0 0.2 1 2 0.011 0.43 2.1 0.0 4 27 15 38 13 73 0.70 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_14 PF13173.1 128 4.6e-05 15.0 0.2 2 2 5.9e-05 0.0024 9.4 0.1 1 48 325 371 325 415 0.65 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_28 - 455 HI0933_like PF03486.9 409 3.5e-06 17.2 0.8 1 3 0.0002 0.0078 6.2 0.0 111 163 61 115 17 120 0.79 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 HI0933_like PF03486.9 409 3.5e-06 17.2 0.8 2 3 8.7e-05 0.0035 7.4 0.2 2 33 154 185 153 189 0.91 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 HI0933_like PF03486.9 409 3.5e-06 17.2 0.8 3 3 0.024 0.96 -0.7 0.0 121 163 205 245 194 249 0.79 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_3 - 227 AAA_29 PF13555.1 62 1e-05 16.7 0.0 1 1 1.1e-06 2.2e-05 15.6 0.0 26 47 8 29 2 38 0.80 # 783 # 1463 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_24 - 578 AAA_29 PF13555.1 62 8e-05 13.8 0.8 1 2 0.00013 0.0026 9.0 0.1 16 44 9 34 3 45 0.76 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_29 PF13555.1 62 8e-05 13.8 0.8 2 2 0.012 0.24 2.7 0.1 22 39 325 342 318 347 0.80 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_28 - 455 FAD_binding_2 PF00890.19 417 0.00039 10.9 0.0 1 3 0.0011 0.045 4.1 0.0 2 99 6 100 5 129 0.79 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 FAD_binding_2 PF00890.19 417 0.00039 10.9 0.0 2 3 0.0084 0.34 1.2 0.0 2 29 155 182 154 187 0.92 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 FAD_binding_2 PF00890.19 417 0.00039 10.9 0.0 3 3 0.007 0.28 1.5 0.0 376 401 265 284 215 289 0.82 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 578 AAA PF00004.24 132 1.9e-07 23.0 1.6 1 2 5.6e-05 0.0022 9.8 0.0 2 23 17 41 16 74 0.74 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA PF00004.24 132 1.9e-07 23.0 1.6 2 2 1.6e-05 0.00064 11.6 0.5 4 28 332 361 329 497 0.82 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_28 - 455 Thi4 PF01946.12 230 0.00011 12.9 0.1 1 2 0.012 0.49 1.0 0.0 19 48 5 36 2 54 0.80 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 Thi4 PF01946.12 230 0.00011 12.9 0.1 2 2 3.5e-05 0.0014 9.3 0.0 6 47 141 182 136 189 0.87 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 Pyr_redox_3 PF13738.1 203 1.7e-14 46.0 0.1 1 3 0.00024 0.0095 7.6 0.0 167 194 3 32 1 38 0.81 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 Pyr_redox_3 PF13738.1 203 1.7e-14 46.0 0.1 2 3 1.3e-11 5e-10 31.3 0.0 96 196 73 181 50 187 0.80 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 Pyr_redox_3 PF13738.1 203 1.7e-14 46.0 0.1 3 3 0.0051 0.2 3.2 0.0 82 147 194 255 190 283 0.78 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 578 DUF258 PF03193.11 161 6.7e-06 17.0 0.1 1 2 0.0019 0.039 4.7 0.0 36 54 14 32 6 52 0.83 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 DUF258 PF03193.11 161 6.7e-06 17.0 0.1 2 2 6e-05 0.0012 9.7 0.0 34 66 325 357 296 402 0.84 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_3 - 227 DUF258 PF03193.11 161 0.00036 11.4 0.4 1 1 0.0002 0.0041 7.9 0.4 36 55 6 25 1 144 0.71 # 783 # 1463 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_24 - 578 AAA_31 PF13614.1 157 5.7e-13 40.7 0.9 1 2 1.9e-08 3.7e-07 21.8 0.1 5 131 17 154 14 165 0.74 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_31 PF13614.1 157 5.7e-13 40.7 0.9 2 2 5.9e-06 0.00012 13.7 0.1 9 53 334 376 327 462 0.53 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_8 - 269 AAA_31 PF13614.1 157 1.9e-12 39.0 0.1 1 1 2e-13 4.1e-12 37.9 0.1 1 134 2 137 2 143 0.81 # 4144 # 4950 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.348 1_24 - 578 NTPase_1 PF03266.10 168 1.1e-06 20.1 4.7 1 3 1.9e-05 0.00077 10.8 0.1 2 30 16 44 15 52 0.88 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 NTPase_1 PF03266.10 168 1.1e-06 20.1 4.7 2 3 0.025 0.99 0.7 0.0 113 167 190 242 184 243 0.79 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 NTPase_1 PF03266.10 168 1.1e-06 20.1 4.7 3 3 0.00017 0.0067 7.7 0.7 3 30 330 357 327 363 0.84 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_3 - 227 AAA_33 PF13671.1 143 1.1e-11 36.4 0.0 1 1 8e-13 1.6e-11 35.9 0.0 2 137 8 139 7 146 0.80 # 783 # 1463 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_24 - 578 AAA_33 PF13671.1 143 5.9e-07 21.1 0.0 1 2 0.0049 0.098 4.2 0.0 3 23 17 37 16 113 0.80 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_33 PF13671.1 143 5.9e-07 21.1 0.0 2 2 3.6e-06 7.2e-05 14.3 0.0 2 79 329 457 328 502 0.66 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 KTI12 PF08433.5 270 1.5e-05 15.9 4.5 1 3 0.00018 0.0071 7.1 0.0 5 43 17 55 15 68 0.85 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 KTI12 PF08433.5 270 1.5e-05 15.9 4.5 2 3 0.024 0.94 0.1 0.2 190 228 238 275 194 310 0.67 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 KTI12 PF08433.5 270 1.5e-05 15.9 4.5 3 3 0.00012 0.0048 7.7 0.3 6 38 331 363 327 409 0.81 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 DnaB_C PF03796.10 259 5.3e-06 17.0 0.2 1 2 0.09 3.6 -2.1 0.0 25 54 19 47 14 52 0.77 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 DnaB_C PF03796.10 259 5.3e-06 17.0 0.2 2 2 4.1e-07 1.6e-05 15.4 0.0 4 49 309 356 306 465 0.84 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_28 - 455 2-Hacid_dh_C PF02826.14 178 4.7e-05 14.2 0.0 1 1 2.9e-06 0.00012 12.9 0.0 18 68 134 184 129 197 0.86 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 578 AAA_30 PF13604.1 196 8.4e-08 23.6 5.3 1 3 1.6e-05 0.00064 10.9 0.1 21 54 16 49 10 58 0.88 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_30 PF13604.1 196 8.4e-08 23.6 5.3 2 3 4.5e-06 0.00018 12.7 0.4 10 54 318 362 315 368 0.88 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_30 PF13604.1 196 8.4e-08 23.6 5.3 3 3 0.034 1.4 0.1 0.1 45 84 449 488 425 536 0.64 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 ABC_tran PF00005.22 137 2e-06 19.8 4.9 1 2 0.0027 0.054 5.4 1.1 8 45 10 47 8 240 0.79 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 ABC_tran PF00005.22 137 2e-06 19.8 4.9 2 2 3.9e-06 7.8e-05 14.6 0.1 10 74 325 393 319 559 0.79 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_3 - 227 ABC_tran PF00005.22 137 1.2e-05 17.2 0.6 1 1 1.1e-06 2.3e-05 16.4 0.6 12 80 6 118 2 220 0.72 # 783 # 1463 # -1 # ID=1_3;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_28 - 455 K_oxygenase PF13434.1 341 4.1e-07 20.7 0.1 1 2 0.0011 0.045 4.2 0.0 190 221 3 34 1 44 0.88 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 K_oxygenase PF13434.1 341 4.1e-07 20.7 0.1 2 2 1.1e-06 4.3e-05 14.1 0.0 112 216 76 178 67 191 0.75 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 UDPG_MGDP_dh_N PF03721.9 185 1.2e-07 22.9 0.1 1 1 6.8e-09 2.7e-07 21.7 0.0 2 54 154 207 153 251 0.83 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 578 RuvB_N PF05496.7 234 8.8e-08 23.0 0.2 1 3 0.0018 0.072 3.7 0.0 52 74 15 37 7 61 0.81 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 RuvB_N PF05496.7 234 8.8e-08 23.0 0.2 2 3 1.4e-06 5.6e-05 13.9 0.1 53 133 329 412 311 436 0.79 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 RuvB_N PF05496.7 234 8.8e-08 23.0 0.2 3 3 0.01 0.41 1.2 0.0 193 230 452 489 435 492 0.86 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_19 PF13245.1 76 2e-07 22.4 5.1 1 3 4.4e-06 0.00017 12.9 0.1 14 50 18 49 11 56 0.88 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_19 PF13245.1 76 2e-07 22.4 5.1 2 3 7.4e-05 0.003 9.0 0.2 17 49 333 361 317 367 0.78 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_19 PF13245.1 76 2e-07 22.4 5.1 3 3 0.035 1.4 0.5 0.1 10 32 439 460 428 480 0.58 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 Helicase_RecD PF05127.9 177 1.9e-06 19.2 0.5 1 2 0.00058 0.023 5.9 0.0 3 46 19 62 17 100 0.86 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 Helicase_RecD PF05127.9 177 1.9e-06 19.2 0.5 2 2 2e-05 0.00079 10.7 0.2 5 110 334 458 330 471 0.65 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_10 PF12846.2 304 2e-05 15.7 0.0 1 2 1e-05 0.0004 11.4 0.0 3 43 15 57 13 148 0.89 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_10 PF12846.2 304 2e-05 15.7 0.0 2 2 0.0075 0.3 2.0 0.0 4 37 329 364 326 414 0.82 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_28 - 455 DAO PF01266.19 358 8.4e-11 32.9 1.4 1 4 0.023 0.9 -0.1 0.0 2 33 6 39 5 46 0.88 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 DAO PF01266.19 358 8.4e-11 32.9 1.4 2 4 6.2e-05 0.0025 8.3 0.0 156 212 68 126 61 140 0.74 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 DAO PF01266.19 358 8.4e-11 32.9 1.4 3 4 2.8e-05 0.0011 9.4 0.1 2 32 155 185 154 190 0.89 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 DAO PF01266.19 358 8.4e-11 32.9 1.4 4 4 1.1e-05 0.00044 10.8 0.0 165 202 211 247 199 267 0.84 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 ThiF PF00899.16 136 6.6e-05 14.4 0.1 1 1 1.2e-05 0.00049 11.6 0.0 4 34 154 183 152 186 0.91 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 578 Zot PF05707.7 193 0.00012 13.2 0.6 1 2 0.0045 0.18 2.8 0.0 4 22 17 35 15 60 0.78 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 Zot PF05707.7 193 0.00012 13.2 0.6 2 2 0.00011 0.0042 8.1 0.1 2 25 328 350 327 405 0.72 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 DUF2075 PF09848.4 352 2.3e-06 18.4 2.9 1 2 0.00072 0.029 4.9 0.1 3 51 15 63 13 150 0.70 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 DUF2075 PF09848.4 352 2.3e-06 18.4 2.9 2 2 2.5e-06 9.8e-05 13.0 0.3 1 92 326 447 326 481 0.65 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 TIP49 PF06068.8 398 9.8e-06 16.0 0.3 1 2 0.005 0.2 1.8 0.0 51 85 14 48 8 58 0.81 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 TIP49 PF06068.8 398 9.8e-06 16.0 0.3 2 2 4.5e-06 0.00018 11.9 0.0 38 85 317 361 312 410 0.90 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 PduV-EutP PF10662.4 143 0.00031 11.9 2.3 1 2 0.015 0.6 1.2 0.1 2 19 14 31 13 38 0.85 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 PduV-EutP PF10662.4 143 0.00031 11.9 2.3 2 2 3.9e-05 0.0016 9.6 0.2 2 36 327 361 325 366 0.84 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_28 - 455 Pyr_redox PF00070.22 80 2.6e-20 64.3 2.9 1 2 9.7e-05 0.0039 9.3 0.8 1 77 5 94 5 102 0.62 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 Pyr_redox PF00070.22 80 2.6e-20 64.3 2.9 2 2 2.2e-17 8.9e-16 49.8 0.1 1 78 154 231 154 234 0.94 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 578 ParA PF10609.4 81 0.046 5.3 7.8 1 2 0.00039 0.016 6.8 0.0 24 62 202 240 183 258 0.80 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 ParA PF10609.4 81 0.046 5.3 7.8 2 2 0.041 1.7 0.3 0.1 23 44 487 508 439 538 0.68 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_28 - 455 Amino_oxidase PF01593.19 450 0.00017 12.3 0.2 1 3 0.0039 0.16 2.5 0.0 7 26 19 40 18 40 0.85 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 Amino_oxidase PF01593.19 450 0.00017 12.3 0.2 2 3 0.0004 0.016 5.8 0.0 222 261 72 114 62 118 0.79 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 Amino_oxidase PF01593.19 450 0.00017 12.3 0.2 3 3 0.043 1.7 -0.9 0.0 237 262 221 245 193 254 0.81 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 578 ArgK PF03308.11 267 1.1e-09 29.0 0.3 1 2 3.7e-09 1.5e-07 22.0 0.0 31 71 15 55 2 57 0.91 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 ArgK PF03308.11 267 1.1e-09 29.0 0.3 2 2 0.00088 0.035 4.4 0.1 29 69 326 366 314 375 0.88 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 PIF1 PF05970.9 364 3.2e-08 24.4 0.1 1 2 0.00017 0.007 6.9 0.0 20 56 11 47 6 57 0.84 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 PIF1 PF05970.9 364 3.2e-08 24.4 0.1 2 2 6.8e-07 2.7e-05 14.8 0.0 11 53 315 357 312 369 0.88 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 RNA_helicase PF00910.17 107 9.2e-06 17.5 0.1 1 2 0.0014 0.055 5.3 0.0 2 23 17 38 16 63 0.77 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 RNA_helicase PF00910.17 107 9.2e-06 17.5 0.1 2 2 7e-05 0.0028 9.5 0.0 1 27 329 355 329 408 0.82 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_28 - 455 IlvN PF07991.7 165 0.00038 11.5 1.0 1 2 3.7e-05 0.0015 9.5 0.1 3 79 2 79 1 149 0.71 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 IlvN PF07991.7 165 0.00038 11.5 1.0 2 2 0.029 1.2 0.1 0.1 5 31 153 179 149 183 0.85 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_28 - 455 AlaDh_PNT_C PF01262.16 168 9.8e-05 13.6 0.1 1 1 6.1e-06 0.00024 12.3 0.1 11 51 143 183 136 190 0.86 # 20189 # 21553 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 1_24 - 578 AAA_24 PF13479.1 213 3.8e-05 14.9 5.2 1 3 0.0018 0.07 4.2 0.1 9 22 19 32 13 63 0.85 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_24 PF13479.1 213 3.8e-05 14.9 5.2 2 3 0.0022 0.087 4.0 0.0 40 77 113 149 105 165 0.86 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_24 PF13479.1 213 3.8e-05 14.9 5.2 3 3 0.00082 0.033 5.3 1.9 6 34 329 364 324 495 0.63 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 NACHT PF05729.7 166 7.6e-05 14.0 5.3 1 2 0.0024 0.096 3.9 0.1 2 22 15 35 14 44 0.79 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 NACHT PF05729.7 166 7.6e-05 14.0 5.3 2 2 1.9e-05 0.00078 10.7 0.5 3 28 329 354 327 360 0.88 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_25 PF13481.1 194 1.2e-13 42.4 0.3 1 2 1.1e-06 4.3e-05 14.6 0.0 36 70 16 50 10 111 0.84 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_25 PF13481.1 194 1.2e-13 42.4 0.3 2 2 1.1e-09 4.3e-08 24.4 0.2 18 152 310 448 298 495 0.63 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_5 PF07728.9 139 8e-05 14.0 0.1 1 2 0.0035 0.14 3.5 0.0 2 24 16 41 15 64 0.73 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 AAA_5 PF07728.9 139 8e-05 14.0 0.1 2 2 0.0002 0.0079 7.6 0.0 5 42 332 369 328 413 0.84 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 APS_kinase PF01583.15 157 1.1e-07 23.2 1.4 1 2 4.3e-06 0.00017 12.9 0.0 5 39 16 50 13 57 0.90 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_24 - 578 APS_kinase PF01583.15 157 1.1e-07 23.2 1.4 2 2 0.00011 0.0042 8.4 0.0 4 34 328 358 325 367 0.85 # 16306 # 18039 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/9f37e022-f65a-4687-a747-4d65429c07ad # Target file: checkm_output/bins/pGCA_002024845.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002024845.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9f37e022-f65a-4687-a747-4d65429c07ad checkm_output/bins/pGCA_002024845.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:48:01 2020 # [ok]