# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_6 - 375 Mg_chelatase PF01078.16 207 7.5e-05 16.5 0.0 1 1 8.2e-07 0.00013 15.7 0.0 7 45 15 53 10 98 0.81 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 7_5 - 251 Mg_chelatase PF01078.16 207 0.00041 14.1 0.1 1 1 1.1e-05 0.0017 12.0 0.0 22 42 101 121 90 127 0.91 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 34_2 - 538 ThiI PF02568.9 197 0.0024 11.9 0.0 1 1 1.7e-05 0.0054 10.7 0.0 4 55 240 292 237 410 0.69 # 257 # 1870 # -1 # ID=34_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.435 34_2 - 538 ATP_bind_3 PF01171.15 182 0.00013 16.1 0.0 1 1 9e-07 0.00029 14.9 0.0 1 49 241 285 241 322 0.80 # 257 # 1870 # -1 # ID=34_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.435 21_5 - 246 Methyltransf_32 PF13679.1 141 3.9e-05 17.9 0.0 1 1 1.9e-07 6e-05 17.3 0.0 12 70 17 68 9 120 0.82 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 21_4 - 288 cobW PF02492.14 178 3.1e-06 21.3 0.0 1 1 1.1e-07 3.6e-05 17.8 0.0 2 126 35 149 34 184 0.62 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 21_5 - 246 RrnaAD PF00398.15 262 3.5e-74 243.6 6.8 1 1 1.2e-76 3.9e-74 243.5 6.8 3 261 2 242 1 243 0.96 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 7_5 - 251 IstB_IS21 PF01695.12 178 6e-52 170.1 0.0 1 1 2.7e-54 8.7e-52 169.6 0.0 2 177 55 233 54 234 0.96 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 29_3 - 286 MipZ PF09140.6 261 1.8e-07 25.0 0.1 1 2 4.9e-07 7.8e-05 16.3 0.0 3 44 6 48 4 63 0.84 # 986 # 1843 # 1 # ID=29_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 29_3 - 286 MipZ PF09140.6 261 1.8e-07 25.0 0.1 2 2 0.00047 0.074 6.6 0.0 74 125 113 164 91 172 0.79 # 986 # 1843 # 1 # ID=29_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 18_4 - 318 MipZ PF09140.6 261 3.2e-07 24.2 0.0 1 2 0.00063 0.1 6.2 0.1 2 45 17 61 16 80 0.80 # 2761 # 3714 # 1 # ID=18_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.346 18_4 - 318 MipZ PF09140.6 261 3.2e-07 24.2 0.0 2 2 7.1e-07 0.00011 15.8 0.0 76 125 114 163 97 166 0.82 # 2761 # 3714 # 1 # ID=18_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.346 18_4 - 318 YhjQ PF06564.7 244 4.5e-07 24.0 0.0 1 1 4.1e-09 6.4e-07 23.4 0.0 3 146 17 165 15 172 0.77 # 2761 # 3714 # 1 # ID=18_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.346 29_3 - 286 YhjQ PF06564.7 244 1.8e-06 22.0 0.0 1 1 3.3e-08 5.3e-06 20.5 0.0 9 153 11 173 4 195 0.71 # 986 # 1843 # 1 # ID=29_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 6_3 - 282 3HCDH_N PF02737.13 180 0.0034 11.6 0.0 1 2 5.8e-05 0.019 9.2 0.0 1 55 2 56 2 93 0.82 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 6_3 - 282 3HCDH_N PF02737.13 180 0.0034 11.6 0.0 2 2 0.044 14 -0.2 0.0 155 178 138 162 135 164 0.84 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_17 - 162 SSB PF00436.20 104 6.3e-40 129.8 0.6 1 1 2.7e-42 8.4e-40 129.4 0.6 1 104 2 103 2 103 0.98 # 19607 # 20092 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 21_5 - 246 Methyltransf_18 PF12847.2 112 4.4e-09 31.5 0.0 1 1 2e-11 6.5e-09 30.9 0.0 2 74 30 98 29 150 0.88 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_15 - 219 AAA_22 PF13401.1 131 7.3e-05 17.5 1.4 1 1 6.3e-06 0.0005 14.8 1.4 5 118 32 183 27 194 0.60 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 AAA_22 PF13401.1 131 0.00015 16.4 0.2 1 1 5e-06 0.0004 15.1 0.2 7 37 33 94 29 200 0.57 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 7_5 - 251 AAA_22 PF13401.1 131 0.00063 14.4 0.8 1 1 0.00036 0.029 9.1 0.8 5 31 102 128 98 204 0.66 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 21_4 - 288 AAA_22 PF13401.1 131 0.00079 14.1 0.0 1 1 2.3e-05 0.0018 12.9 0.0 3 88 32 111 29 151 0.81 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 21_5 - 246 Methyltransf_11 PF08241.7 95 0.00019 16.5 0.0 1 1 1.2e-06 0.00037 15.5 0.0 2 59 35 92 34 100 0.85 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 5_10 - 324 Citrate_ly_lig PF08218.6 182 0.00013 16.0 0.0 1 1 8e-07 0.00025 15.0 0.0 10 143 72 208 64 217 0.75 # 8879 # 9850 # -1 # ID=5_10;partial=00;start_type=GTG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.372 21_4 - 288 KAP_NTPase PF07693.9 325 0.00082 12.9 0.0 1 1 2.9e-06 0.00092 12.7 0.0 8 69 20 80 14 272 0.81 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 3_15 - 219 AAA_15 PF13175.1 415 5.9e-10 33.2 2.7 1 2 2.4e-06 0.00038 14.1 3.1 12 80 6 78 3 131 0.57 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_15 - 219 AAA_15 PF13175.1 415 5.9e-10 33.2 2.7 2 2 2.7e-07 4.3e-05 17.2 0.2 371 412 147 190 78 193 0.84 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 AAA_15 PF13175.1 415 8.8e-06 19.5 0.0 1 2 0.0017 0.27 4.7 0.0 25 44 28 55 8 117 0.73 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_6 - 375 AAA_15 PF13175.1 415 8.8e-06 19.5 0.0 2 2 6.9e-06 0.0011 12.6 0.0 372 411 155 194 147 195 0.92 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 12_4 - 323 NAD_binding_7 PF13241.1 103 0.0016 13.3 0.0 1 1 1.3e-05 0.0041 11.9 0.0 5 63 144 197 143 244 0.72 # 1978 # 2946 # -1 # ID=12_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.446 7_5 - 251 AAA_17 PF13207.1 121 2.9e-05 19.4 0.5 1 1 2.8e-06 0.00022 16.6 0.0 2 56 104 164 103 201 0.67 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 3_15 - 219 AAA_17 PF13207.1 121 4.1e-05 19.0 0.8 1 1 1.2e-06 9.9e-05 17.7 0.8 2 24 34 55 33 212 0.71 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 AAA_17 PF13207.1 121 0.00015 17.2 0.4 1 1 4.6e-06 0.00036 15.9 0.4 1 20 32 51 32 210 0.84 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 21_4 - 288 AAA_17 PF13207.1 121 0.00016 17.0 0.0 1 1 5.7e-06 0.00045 15.6 0.0 3 77 37 117 36 160 0.64 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 3_15 - 219 AAA_21 PF13304.1 303 4.6e-15 50.8 1.3 1 2 1.6e-07 2.5e-05 18.9 3.7 1 56 33 100 33 123 0.57 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_15 - 219 AAA_21 PF13304.1 303 4.6e-15 50.8 1.3 2 2 3e-11 4.8e-09 31.1 0.1 171 298 90 189 66 194 0.68 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 AAA_21 PF13304.1 303 2.2e-09 32.2 0.2 1 2 6.5e-07 0.0001 16.8 0.2 3 22 34 53 33 72 0.84 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_6 - 375 AAA_21 PF13304.1 303 2.2e-09 32.2 0.2 2 2 9.8e-06 0.0015 13.0 0.0 198 280 97 179 83 196 0.72 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_15 - 219 Miro PF08477.8 119 1.4e-05 20.1 0.0 1 1 2.2e-07 3.6e-05 18.8 0.0 3 39 35 70 34 117 0.75 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 Miro PF08477.8 119 0.00025 16.1 0.0 1 1 4e-06 0.00063 14.8 0.0 1 28 32 57 32 109 0.84 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_15 - 219 MobB PF03205.9 140 0.0007 13.8 0.4 1 1 1.2e-05 0.0019 12.4 0.1 3 21 34 52 32 72 0.82 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 MobB PF03205.9 140 0.0022 12.2 0.0 1 1 3.2e-05 0.0051 11.1 0.0 2 21 32 51 31 57 0.89 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 34_2 - 538 NAD_synthase PF02540.12 242 2.2e-14 47.4 0.1 1 2 2.1e-12 6.5e-10 32.8 0.1 14 86 235 307 222 326 0.74 # 257 # 1870 # -1 # ID=34_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.435 34_2 - 538 NAD_synthase PF02540.12 242 2.2e-14 47.4 0.1 2 2 3.7e-06 0.0012 12.3 0.0 148 177 385 414 379 453 0.90 # 257 # 1870 # -1 # ID=34_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.435 29_3 - 286 ArsA_ATPase PF02374.10 305 6.9e-08 26.3 0.1 1 1 1.2e-09 1.9e-07 24.9 0.0 6 136 9 147 4 151 0.76 # 986 # 1843 # 1 # ID=29_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 18_4 - 318 ArsA_ATPase PF02374.10 305 0.00048 13.7 0.2 1 2 1.5e-05 0.0023 11.5 0.0 2 38 16 54 15 73 0.84 # 2761 # 3714 # 1 # ID=18_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.346 18_4 - 318 ArsA_ATPase PF02374.10 305 0.00048 13.7 0.2 2 2 0.08 13 -0.8 0.0 124 137 134 147 99 171 0.81 # 2761 # 3714 # 1 # ID=18_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.346 7_5 - 251 PhoH PF02562.11 205 9.7e-06 19.4 0.0 1 1 5.8e-08 1.8e-05 18.5 0.0 16 49 98 132 89 144 0.85 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 3_6 - 375 T2SE PF00437.15 272 0.00026 14.5 0.1 1 1 3.1e-06 0.00049 13.5 0.1 115 148 17 50 2 62 0.78 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 21_4 - 288 T2SE PF00437.15 272 0.0003 14.3 0.0 1 1 3.5e-06 0.00055 13.4 0.0 103 166 6 69 2 107 0.76 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 12_4 - 323 AdoHcyase_NAD PF00670.16 162 0.00031 15.2 1.6 1 1 1.2e-05 0.0038 11.6 1.6 21 111 144 231 137 247 0.76 # 1978 # 2946 # -1 # ID=12_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.446 3_6 - 375 G-alpha PF00503.15 389 0.00068 12.9 0.0 1 1 2.3e-06 0.00074 12.8 0.0 60 79 32 51 18 208 0.90 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 21_5 - 246 CMAS PF02353.15 273 0.00054 13.6 0.6 1 1 3e-06 0.00094 12.8 0.0 51 105 18 71 12 99 0.78 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 12_4 - 323 Shikimate_DH PF01488.15 135 7e-05 17.5 0.6 1 1 3.5e-06 0.0011 13.6 0.6 8 100 142 222 136 237 0.73 # 1978 # 2946 # -1 # ID=12_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.446 18_4 - 318 Methyltransf_24 PF13578.1 106 0.0018 13.7 0.0 1 1 2.8e-05 0.009 11.4 0.0 52 93 120 160 76 164 0.69 # 2761 # 3714 # 1 # ID=18_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.346 21_4 - 288 Zeta_toxin PF06414.7 201 2.9e-57 187.5 0.0 1 1 1.2e-59 3.9e-57 187.1 0.0 4 198 23 214 18 217 0.95 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 6_3 - 282 F420_oxidored PF03807.12 96 2.3e-08 28.9 0.0 1 1 3e-10 4.8e-08 27.9 0.0 2 93 3 91 2 93 0.87 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 12_4 - 323 F420_oxidored PF03807.12 96 0.00032 15.7 1.7 1 1 1.5e-05 0.0024 12.9 0.2 1 36 148 179 148 229 0.85 # 1978 # 2946 # -1 # ID=12_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.446 3_15 - 219 SMC_N PF02463.14 220 5.4e-09 30.1 3.6 1 1 3.3e-09 5.3e-07 23.6 3.6 25 212 32 203 12 211 0.66 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 SMC_N PF02463.14 220 6e-06 20.1 0.2 1 1 4.4e-07 7e-05 16.6 0.2 27 209 33 206 4 215 0.68 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 34_2 - 538 TIGR02432 TIGR02432 189 0.00027 15.1 0.0 1 1 1.9e-06 0.0006 14.0 0.0 1 48 241 284 241 320 0.77 # 257 # 1870 # -1 # ID=34_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.435 6_5 - 283 ATP-sulfurylase PF01747.12 215 0.001 12.9 0.0 1 1 7e-06 0.0022 11.8 0.0 6 63 5 63 2 72 0.76 # 3706 # 4554 # 1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.296 3_6 - 375 Arch_ATPase PF01637.13 234 0.0015 12.8 0.1 1 1 8.6e-06 0.0027 11.9 0.1 21 41 31 51 19 67 0.77 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 34_2 - 538 QueC PF06508.8 210 1.7e-05 18.7 0.0 1 1 1.2e-07 3.7e-05 17.6 0.0 2 176 242 406 241 412 0.84 # 257 # 1870 # -1 # ID=34_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.435 21_4 - 288 AAA_16 PF13191.1 185 1.5e-06 22.8 0.0 1 1 3.8e-08 3e-06 21.8 0.0 18 81 27 82 12 137 0.70 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 3_15 - 219 AAA_16 PF13191.1 185 7.4e-05 17.3 0.3 1 1 1.9e-06 0.00015 16.3 0.3 24 61 31 70 17 204 0.61 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 AAA_16 PF13191.1 185 8.3e-05 17.2 0.4 1 1 1.8e-06 0.00014 16.4 0.4 21 44 29 50 17 194 0.88 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 7_5 - 251 AAA_16 PF13191.1 185 0.0024 12.4 0.0 1 1 4.7e-05 0.0037 11.8 0.0 25 81 102 161 89 208 0.74 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 21_4 - 288 AAA_23 PF13476.1 202 0.00043 15.2 1.2 1 2 0.00052 0.055 8.3 0.0 22 39 36 53 4 55 0.89 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 21_4 - 288 AAA_23 PF13476.1 202 0.00043 15.2 1.2 2 2 0.0041 0.44 5.3 0.4 166 198 238 272 149 273 0.66 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 3_6 - 375 AAA_23 PF13476.1 202 0.00052 14.9 0.0 1 1 1.1e-05 0.0011 13.8 0.0 2 39 5 50 4 53 0.70 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_15 - 219 AAA_23 PF13476.1 202 0.0012 13.7 6.6 1 1 2.5e-05 0.0026 12.6 6.5 12 132 25 147 19 216 0.62 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_15 - 219 AAA_18 PF13238.1 129 4e-05 18.5 1.6 1 1 9.1e-07 0.00014 16.7 1.3 2 42 35 98 35 209 0.72 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 AAA_18 PF13238.1 129 0.0016 13.3 1.2 1 1 1.8e-05 0.0029 12.4 1.0 1 22 33 54 33 179 0.75 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 6_3 - 282 GFO_IDH_MocA PF01408.17 120 5.6e-09 31.1 0.0 1 1 3.1e-11 1e-08 30.3 0.0 1 84 1 80 1 89 0.88 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 29_3 - 286 CbiA PF01656.18 195 3.2e-25 83.2 0.0 1 1 2.6e-27 4.2e-25 82.8 0.0 2 193 7 238 6 240 0.81 # 986 # 1843 # 1 # ID=29_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 18_4 - 318 CbiA PF01656.18 195 4.1e-20 66.5 0.0 1 1 3.6e-22 5.8e-20 66.0 0.0 1 174 18 222 18 241 0.74 # 2761 # 3714 # 1 # ID=18_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.346 7_5 - 251 KaiC PF06745.8 227 1.2e-05 19.1 0.0 1 2 1.3e-07 4e-05 17.3 0.0 17 81 99 162 84 201 0.82 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 7_5 - 251 KaiC PF06745.8 227 1.2e-05 19.1 0.0 2 2 0.075 24 -1.6 0.0 30 45 196 211 189 220 0.81 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 3_15 - 219 AAA_14 PF13173.1 128 6.3e-06 20.7 0.6 1 1 6.6e-07 0.0001 16.7 0.6 3 115 32 207 30 216 0.82 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 7_5 - 251 AAA_14 PF13173.1 128 2.6e-05 18.7 1.6 1 1 3.1e-07 5e-05 17.8 0.2 3 71 102 174 100 242 0.73 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 6_3 - 282 Rossmann-like PF10727.4 127 5.3e-12 40.1 0.0 1 1 2.4e-14 7.7e-12 39.6 0.0 12 127 2 115 1 115 0.97 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 10_10 - 151 AsnA PF03590.10 244 0.00058 13.8 0.0 1 1 2.8e-06 0.00089 13.2 0.0 137 209 26 101 19 121 0.81 # 7640 # 8092 # -1 # ID=10_10;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.291 2_8 - 437 Glyco_hydro_4 PF02056.11 183 3.5e-67 219.8 0.1 1 1 1.8e-69 5.6e-67 219.1 0.1 1 182 3 185 3 186 0.97 # 5018 # 6328 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.349 3_6 - 375 AAA_29 PF13555.1 62 1.2e-05 19.4 0.0 1 1 1.7e-07 2.8e-05 18.2 0.0 22 40 29 47 16 51 0.83 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_15 - 219 AAA_29 PF13555.1 62 3.6e-05 17.8 0.3 1 1 4.6e-07 7.3e-05 16.8 0.3 23 40 31 48 20 62 0.83 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 7_5 - 251 AAA PF00004.24 132 3.4e-05 18.6 0.0 1 1 7.2e-07 7.6e-05 17.5 0.0 1 66 104 172 104 183 0.81 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 21_4 - 288 AAA PF00004.24 132 4.1e-05 18.3 0.0 1 1 9.9e-07 0.00011 17.0 0.0 2 37 37 72 36 110 0.79 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 3_6 - 375 AAA PF00004.24 132 0.0027 12.4 0.0 1 1 5.8e-05 0.0061 11.3 0.0 1 52 33 84 33 120 0.76 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 7_5 - 251 Bac_DnaA PF00308.13 219 1.6e-05 19.1 0.0 1 1 8.2e-08 2.6e-05 18.5 0.0 35 108 102 175 87 210 0.77 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 1_22 - 236 tRNA-synt_1_2 PF13603.1 185 0.00071 13.4 0.1 1 1 5e-06 0.0016 12.3 0.0 15 65 61 112 53 132 0.82 # 22110 # 22817 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.364 21_5 - 246 PCMT PF01135.14 210 2.4e-06 21.7 0.0 1 1 1.6e-08 5e-06 20.7 0.0 58 122 14 75 2 87 0.83 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_15 - 219 MMR_HSR1 PF01926.18 116 5e-07 24.2 1.8 1 1 1.4e-08 2.3e-06 22.1 1.8 3 56 35 96 33 215 0.59 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 MMR_HSR1 PF01926.18 116 0.00042 14.8 0.0 1 1 1.3e-05 0.0021 12.6 0.0 1 28 32 58 32 121 0.83 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_15 - 219 DUF258 PF03193.11 161 4.3e-07 23.8 0.1 1 1 4.7e-09 7.4e-07 23.0 0.1 20 69 15 65 2 96 0.76 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 DUF258 PF03193.11 161 1.1e-05 19.1 0.0 1 1 1.3e-07 2.1e-05 18.3 0.0 23 64 17 59 3 117 0.82 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 34_2 - 538 Asn_synthase PF00733.16 255 3.4e-06 21.2 0.0 1 1 2.8e-08 8.7e-06 19.9 0.0 15 81 237 302 229 312 0.78 # 257 # 1870 # -1 # ID=34_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.435 12_4 - 323 NAD_binding_2 PF03446.10 163 2.2e-07 25.4 0.1 1 1 7.7e-09 1.2e-06 23.0 0.0 2 111 147 247 146 256 0.88 # 1978 # 2946 # -1 # ID=12_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.446 6_3 - 282 NAD_binding_2 PF03446.10 163 7.8e-07 23.6 0.0 1 1 9e-09 1.4e-06 22.7 0.0 2 95 1 93 1 106 0.87 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 29_3 - 286 AAA_31 PF13614.1 157 2.9e-07 25.1 0.1 1 1 4.3e-09 6.9e-07 23.9 0.1 9 156 12 175 6 176 0.83 # 986 # 1843 # 1 # ID=29_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367 18_4 - 318 AAA_31 PF13614.1 157 9.2e-07 23.4 0.1 1 1 1.3e-07 2e-05 19.1 0.1 1 148 16 166 16 174 0.68 # 2761 # 3714 # 1 # ID=18_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.346 3_15 - 219 NTPase_1 PF03266.10 168 0.0025 12.0 2.0 1 2 0.00073 0.23 5.7 0.0 3 20 35 52 33 73 0.87 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_15 - 219 NTPase_1 PF03266.10 168 0.0025 12.0 2.0 2 2 0.00057 0.18 6.0 0.4 67 159 119 214 101 217 0.69 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 6_5 - 283 Pantoate_ligase PF02569.10 280 3.5e-112 368.2 0.2 1 1 1.2e-114 3.9e-112 368.0 0.2 1 278 1 277 1 279 0.99 # 3706 # 4554 # 1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.296 21_4 - 288 AAA_33 PF13671.1 143 3.3e-07 24.8 0.0 1 1 6.9e-09 7.3e-07 23.7 0.0 3 108 37 148 36 172 0.84 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 3_6 - 375 AAA_33 PF13671.1 143 3.5e-05 18.2 0.3 1 1 1.5e-06 0.00015 16.1 0.3 2 33 33 97 33 206 0.57 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_15 - 219 AAA_33 PF13671.1 143 0.00097 13.6 0.2 1 1 2.5e-05 0.0026 12.2 0.2 4 33 36 89 33 196 0.48 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 21_5 - 246 Methyltransf_26 PF13659.1 117 1.3e-08 29.4 0.0 1 1 7.2e-11 2.3e-08 28.7 0.0 2 83 31 106 30 200 0.80 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 6_3 - 282 NAD_Gly3P_dh_N PF01210.18 157 4.7e-06 21.0 0.0 1 1 2.8e-07 8.9e-05 16.8 0.0 2 110 3 99 2 108 0.82 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 12_4 - 323 2-Hacid_dh_C PF02826.14 178 1.1e-57 188.5 0.0 1 1 9.9e-60 1.6e-57 188.1 0.0 1 178 112 294 112 294 0.94 # 1978 # 2946 # -1 # ID=12_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.446 6_3 - 282 2-Hacid_dh_C PF02826.14 178 3e-05 17.8 0.0 1 1 3.3e-07 5.3e-05 17.0 0.0 38 100 2 67 1 73 0.83 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 6_3 - 282 ApbA PF02558.11 151 0.00012 16.1 0.0 1 1 8e-07 0.00025 15.0 0.0 3 98 5 89 3 94 0.85 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 7_5 - 251 FtsK_SpoIIIE PF01580.13 205 0.00079 13.4 0.0 1 1 4.8e-06 0.0015 12.5 0.0 9 64 64 127 56 134 0.74 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 21_5 - 246 MTS PF05175.9 170 1.9e-07 25.1 0.0 1 1 1e-09 3.2e-07 24.4 0.0 24 118 22 113 9 120 0.85 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 6_3 - 282 Caps_synth_GfcC PF06251.6 229 0.00039 14.1 0.1 1 1 2e-06 0.00063 13.5 0.1 128 181 21 74 18 85 0.83 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 3_6 - 375 ABC_tran PF00005.22 137 1.1e-34 114.2 0.0 1 1 1.9e-36 2e-34 113.4 0.0 1 136 20 162 20 163 0.95 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_15 - 219 ABC_tran PF00005.22 137 5.7e-34 111.9 0.1 1 1 8e-36 8.4e-34 111.3 0.1 1 136 21 157 21 158 0.92 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 21_4 - 288 ABC_tran PF00005.22 137 0.00069 14.5 0.1 1 1 1e-05 0.0011 13.9 0.1 14 79 36 96 28 270 0.82 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 3_6 - 375 TIGR03263 TIGR03263 180 0.0071 10.2 2.8 1 2 2.2e-05 0.0069 10.2 0.1 4 22 33 51 30 59 0.85 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_6 - 375 TIGR03263 TIGR03263 180 0.0071 10.2 2.8 2 2 0.062 20 -1.0 0.1 117 148 156 187 141 209 0.70 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 6_3 - 282 UDPG_MGDP_dh_N PF03721.9 185 0.00084 13.3 0.1 1 2 7.7e-06 0.0024 11.8 0.1 1 34 1 34 1 66 0.86 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 6_3 - 282 UDPG_MGDP_dh_N PF03721.9 185 0.00084 13.3 0.1 2 2 0.08 25 -1.3 0.0 63 85 45 67 36 87 0.74 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 3_6 - 375 DAP3 PF10236.4 309 0.0021 11.6 0.1 1 1 1.1e-05 0.0034 10.8 0.1 22 42 29 49 4 53 0.86 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 21_4 - 288 RuvB_N PF05496.7 234 1.9e-05 18.3 0.0 1 1 8.1e-08 2.6e-05 17.9 0.0 30 175 14 158 5 181 0.80 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 3_6 - 375 AAA_19 PF13245.1 76 0.00015 16.0 0.1 1 1 1.1e-06 0.00033 14.9 0.1 6 34 26 53 23 75 0.84 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 12_4 - 323 NAD_binding_10 PF13460.1 183 0.0004 14.9 0.0 1 1 3.1e-06 0.00098 13.7 0.0 2 47 150 189 149 220 0.86 # 1978 # 2946 # -1 # ID=12_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.446 23_5 - 101 LEF-8 PF04941.7 748 0.0012 11.0 0.0 1 1 4.1e-06 0.0013 11.0 0.0 582 655 15 89 4 100 0.81 # 1626 # 1928 # 1 # ID=23_5;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.327 3_6 - 375 AAA_10 PF12846.2 304 0.00015 15.8 0.2 1 1 9.3e-07 0.0003 14.8 0.2 5 23 34 52 32 67 0.84 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 21_5 - 246 NodS PF05401.6 201 8.3e-08 26.4 0.0 1 1 4.2e-10 1.3e-07 25.7 0.0 41 120 27 106 7 116 0.86 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_15 - 219 SbcCD_C PF13558.1 90 0.00047 14.6 0.0 1 1 2.3e-05 0.0073 10.8 0.0 23 89 120 173 112 174 0.74 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 21_5 - 246 Methyltransf_31 PF13847.1 152 3.8e-07 24.3 0.1 1 1 1.6e-09 5.1e-07 23.9 0.0 2 76 28 97 27 218 0.89 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 21_5 - 246 TRM13 PF05206.9 259 0.00041 14.1 0.1 1 1 2.1e-06 0.00067 13.5 0.1 4 67 15 78 12 101 0.79 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 21_5 - 246 DOT1 PF08123.8 205 0.0001 16.2 0.2 1 2 8.3e-07 0.00026 14.8 0.0 28 88 15 73 11 98 0.79 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 21_5 - 246 DOT1 PF08123.8 205 0.0001 16.2 0.2 2 2 0.099 31 -1.7 0.1 83 119 184 220 168 231 0.51 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_6 - 375 PduV-EutP PF10662.4 143 0.002 12.1 0.2 1 1 1.8e-05 0.0058 10.7 0.1 2 25 31 54 30 60 0.89 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 21_4 - 288 DUF815 PF05673.8 250 0.00039 13.9 0.0 1 1 1.9e-06 0.00062 13.3 0.0 37 82 13 62 2 91 0.77 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 6_3 - 282 Pyr_redox PF00070.22 80 0.0019 13.2 0.0 1 2 5.1e-05 0.016 10.2 0.0 2 26 3 27 2 35 0.89 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 6_3 - 282 Pyr_redox PF00070.22 80 0.0019 13.2 0.0 2 2 0.099 31 -0.4 0.0 17 35 149 167 143 196 0.79 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_6 - 383 AAA_11 PF13086.1 236 0.00044 14.4 1.5 1 1 4.4e-06 0.00069 13.7 1.5 110 175 205 278 135 280 0.80 # 3296 # 4444 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 21_4 - 288 AAA_11 PF13086.1 236 0.00054 14.1 1.0 1 1 1.4e-05 0.0022 12.1 1.0 11 134 27 253 15 274 0.62 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 21_4 - 288 CPT PF07931.7 174 0.0003 15.0 0.0 1 1 1.8e-06 0.00056 14.1 0.0 5 89 37 116 34 139 0.70 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 7_5 - 251 Sigma54_activ_2 PF14532.1 138 0.0005 14.7 0.0 1 2 0.0099 3.1 2.4 0.0 83 130 51 94 46 97 0.85 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 7_5 - 251 Sigma54_activ_2 PF14532.1 138 0.0005 14.7 0.0 2 2 3.7e-05 0.012 10.2 0.0 19 61 99 141 95 225 0.73 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 11_8 - 230 NAD_binding_5 PF07994.7 295 0.081 6.9 6.2 1 1 0.00035 0.11 6.4 6.2 80 145 81 159 75 221 0.86 # 4786 # 5475 # 1 # ID=11_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.335 21_5 - 246 TIGR00755 TIGR00755 256 2e-44 146.0 3.2 1 1 7.6e-47 2.4e-44 145.7 3.2 5 227 5 221 1 235 0.88 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 11_2 - 223 tRNA-synt_His PF13393.1 311 0.0055 10.3 7.5 1 1 3e-05 0.0096 9.5 7.5 162 240 142 221 134 222 0.87 # 337 # 1005 # 1 # ID=11_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.320 3_15 - 219 Pox_A32 PF04665.7 241 0.0014 12.4 0.2 1 2 4.5e-06 0.0014 12.4 0.2 17 96 35 110 23 140 0.70 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_15 - 219 Pox_A32 PF04665.7 241 0.0014 12.4 0.2 2 2 0.078 25 -1.4 0.2 181 211 168 200 161 217 0.53 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 6_3 - 282 PDH PF02153.12 258 7.9e-05 16.1 0.0 1 1 3.1e-07 9.8e-05 15.8 0.0 4 106 18 117 15 175 0.82 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 21_5 - 246 Methyltransf_23 PF13489.1 161 3.4e-06 21.4 0.0 1 1 3.1e-08 9.8e-06 19.9 0.0 7 60 16 82 9 225 0.84 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 34_2 - 538 tRNA_Me_trans PF03054.11 356 9.2e-06 18.9 0.1 1 2 1e-07 3.3e-05 17.1 0.1 1 33 240 273 240 306 0.83 # 257 # 1870 # -1 # ID=34_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.435 34_2 - 538 tRNA_Me_trans PF03054.11 356 9.2e-06 18.9 0.1 2 2 0.055 18 -1.8 0.0 163 185 383 405 376 408 0.84 # 257 # 1870 # -1 # ID=34_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.435 2_8 - 437 Ldh_1_N PF00056.18 141 1.3e-05 19.5 0.1 1 2 4.6e-05 0.014 9.7 0.0 2 74 3 81 2 87 0.70 # 5018 # 6328 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.349 2_8 - 437 Ldh_1_N PF00056.18 141 1.3e-05 19.5 0.1 2 2 0.00027 0.085 7.2 0.0 96 133 126 163 122 168 0.86 # 5018 # 6328 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.349 21_4 - 288 Gtr1_RagA PF04670.7 232 5.8e-05 16.8 0.0 1 1 3.2e-07 0.0001 16.0 0.0 2 30 36 64 35 104 0.80 # 1034 # 1897 # 1 # ID=21_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.363 7_5 - 251 RNA_helicase PF00910.17 107 0.00079 14.2 0.1 1 2 0.047 15 0.4 0.0 50 91 39 75 13 88 0.67 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 7_5 - 251 RNA_helicase PF00910.17 107 0.00079 14.2 0.1 2 2 2e-05 0.0064 11.2 0.0 1 61 104 176 104 196 0.70 # 3485 # 4237 # 1 # ID=7_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.388 10_10 - 151 Ribosomal_L29 PF00831.18 58 0.0014 12.9 2.1 1 2 0.00031 0.049 7.9 0.1 2 25 50 73 49 76 0.88 # 7640 # 8092 # -1 # ID=10_10;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.291 10_10 - 151 Ribosomal_L29 PF00831.18 58 0.0014 12.9 2.1 2 2 0.0043 0.68 4.3 0.3 7 25 122 140 117 147 0.85 # 7640 # 8092 # -1 # ID=10_10;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.291 22_5 - 121 Ribosomal_L29 PF00831.18 58 0.0015 12.8 5.5 1 1 1.5e-05 0.0024 12.1 5.5 7 46 3 43 1 44 0.82 # 2275 # 2637 # 1 # ID=22_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.386 3_13 - 417 EFG_IV PF03764.13 120 0.0028 11.7 0.0 1 1 1.9e-05 0.0062 10.7 0.0 43 91 344 393 321 397 0.82 # 11003 # 12253 # -1 # ID=3_13;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.388 6_3 - 282 IlvN PF07991.7 165 6.9e-06 20.0 0.0 1 1 6.5e-08 1e-05 19.5 0.0 6 94 2 91 1 102 0.77 # 2007 # 2852 # 1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.292 12_4 - 323 IlvN PF07991.7 165 0.00036 14.4 0.0 1 1 8.1e-06 0.0013 12.7 0.0 2 91 144 226 143 241 0.80 # 1978 # 2946 # -1 # ID=12_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.446 1_17 - 162 tRNA_anti-codon PF01336.20 75 2.4e-06 21.9 0.1 1 1 1.2e-08 3.8e-06 21.3 0.1 27 72 47 95 5 103 0.79 # 19607 # 20092 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 3_15 - 219 AAA_24 PF13479.1 213 5e-05 17.5 2.1 1 2 4.7e-05 0.015 9.4 0.5 7 23 35 51 32 60 0.83 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_15 - 219 AAA_24 PF13479.1 213 5e-05 17.5 2.1 2 2 0.00021 0.068 7.2 0.0 114 156 167 206 162 216 0.80 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 NACHT PF05729.7 166 5.9e-05 17.3 0.0 1 1 3.7e-07 0.00012 16.3 0.0 2 37 32 68 31 82 0.75 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_15 - 219 AAA_25 PF13481.1 194 7.2e-08 26.6 0.0 1 2 7.3e-07 0.00012 16.1 0.0 31 55 29 53 12 113 0.84 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_15 - 219 AAA_25 PF13481.1 194 7.2e-08 26.6 0.0 2 2 0.00014 0.022 8.7 0.0 164 190 164 190 148 194 0.82 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 AAA_25 PF13481.1 194 0.00074 13.5 0.0 1 1 1.1e-05 0.0017 12.3 0.0 30 65 27 64 19 84 0.77 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_6 - 375 AAA_28 PF13521.1 163 0.00044 14.8 0.7 1 1 9.5e-06 0.0015 13.0 0.1 1 21 32 52 32 69 0.87 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_15 - 219 AAA_28 PF13521.1 163 0.0036 11.8 0.0 1 1 5.1e-05 0.008 10.7 0.0 2 22 34 54 33 78 0.87 # 13708 # 14364 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.277 3_6 - 375 TOBE_2 PF08402.5 75 4.1e-14 46.9 0.0 1 1 4.6e-16 1.5e-13 45.2 0.0 1 75 278 346 278 346 0.91 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 21_5 - 246 Methyltransf_4 PF02390.12 197 0.00045 13.8 0.1 1 1 2.7e-06 0.00085 12.9 0.0 17 52 27 62 3 102 0.72 # 2160 # 2897 # -1 # ID=21_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_6 - 375 AAA_5 PF07728.9 139 0.001 13.4 0.3 1 2 2.1e-05 0.0067 10.7 0.2 2 21 33 52 32 66 0.89 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 3_6 - 375 AAA_5 PF07728.9 139 0.001 13.4 0.3 2 2 0.056 18 -0.4 0.0 86 113 205 233 186 257 0.74 # 3995 # 5119 # -1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.369 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/45aed4a7-e72c-4b2a-addc-f483602deebf # Target file: checkm_output/bins/pGCA_002007625.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002007625.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/45aed4a7-e72c-4b2a-addc-f483602deebf checkm_output/bins/pGCA_002007625.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:48:00 2020 # [ok]