#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_3                  -            543 UPF0079              PF02367.12   123   1.1e-05   13.0   0.2   1   2      0.01     0.031    1.9   0.0    70    99   242   271   233   283 0.79 # 3352 # 4980 # -1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.359
1_3                  -            543 UPF0079              PF02367.12   123   1.1e-05   13.0   0.2   2   2   0.00012   0.00036    8.2   0.1    58   107   316   367   308   380 0.78 # 3352 # 4980 # -1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.359
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/538ed0f8-0a33-4702-86df-c7b985c9f73d
# Target file:     checkm_output/bins/pGCA_002005525.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002005525.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/538ed0f8-0a33-4702-86df-c7b985c9f73d checkm_output/bins/pGCA_002005525.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:47:57 2020
# [ok]