# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 252 Mannitol_dh PF01232.18 151 0.00055 9.4 7.8 1 2 0.074 0.66 -0.6 0.0 56 90 37 71 20 75 0.78 # 3817 # 4572 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.454 1_5 - 252 Mannitol_dh PF01232.18 151 0.00055 9.4 7.8 2 2 4e-05 0.00036 10.0 4.4 20 89 143 213 137 218 0.79 # 3817 # 4572 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.454 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3a9c1ed7-a4f7-47f1-a1c9-9d7ef3966270 # Target file: checkm_output/bins/pGCA_001999205.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001999205.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3a9c1ed7-a4f7-47f1-a1c9-9d7ef3966270 checkm_output/bins/pGCA_001999205.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:47:45 2020 # [ok]