# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 543 UPF0079 PF02367.12 123 1.1e-05 13.0 0.2 1 2 0.01 0.031 1.9 0.0 70 99 242 271 233 283 0.79 # 814 # 2442 # -1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=10bp;gc_cont=0.359 1_2 - 543 UPF0079 PF02367.12 123 1.1e-05 13.0 0.2 2 2 0.00012 0.00036 8.2 0.1 58 107 316 367 308 380 0.78 # 814 # 2442 # -1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=10bp;gc_cont=0.359 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/cd639cdb-0f57-49bb-a0c4-b0d4da467540 # Target file: checkm_output/bins/pGCA_001991095.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001991095.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/cd639cdb-0f57-49bb-a0c4-b0d4da467540 checkm_output/bins/pGCA_001991095.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:47:44 2020 # [ok]