# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_15 - 616 Limkain-b1 PF11608.3 91 0.0011 10.9 4.1 1 2 0.00029 0.017 7.1 0.0 12 47 190 225 182 232 0.86 # 10216 # 12063 # -1 # ID=1_15;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.452 1_15 - 616 Limkain-b1 PF11608.3 91 0.0011 10.9 4.1 2 2 0.0058 0.35 2.9 0.1 9 50 560 601 558 612 0.83 # 10216 # 12063 # -1 # ID=1_15;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.452 3_1 - 450 Saccharop_dh PF03435.13 386 0.00035 11.8 0.0 1 2 2.7e-05 0.0016 9.6 0.0 2 33 7 36 7 39 0.90 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 Saccharop_dh PF03435.13 386 0.00035 11.8 0.0 2 2 0.033 2 -0.6 0.0 2 38 163 197 162 213 0.82 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 1_18 - 270 MipZ PF09140.6 261 9.6e-10 30.1 0.1 1 2 3.2e-08 1.9e-06 19.3 0.0 3 46 5 47 3 82 0.80 # 14269 # 15078 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_18 - 270 MipZ PF09140.6 261 9.6e-10 30.1 0.1 2 2 6e-05 0.0036 8.5 0.0 79 125 108 154 95 159 0.84 # 14269 # 15078 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_18 - 270 YhjQ PF06564.7 244 2.6e-15 48.6 0.0 1 1 5.6e-17 3.4e-15 48.2 0.0 2 150 3 160 1 188 0.84 # 14269 # 15078 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 3_1 - 450 3HCDH_N PF02737.13 180 2.2e-08 26.1 0.0 1 2 0.00031 0.019 6.8 0.0 4 34 8 38 5 46 0.93 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 3HCDH_N PF02737.13 180 2.2e-08 26.1 0.0 2 2 2.2e-07 1.3e-05 17.1 0.0 2 49 162 209 161 249 0.82 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 GIDA PF01134.17 392 2.2e-06 18.9 0.3 1 3 3.4e-06 0.0002 12.4 0.0 3 48 7 59 5 131 0.88 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 GIDA PF01134.17 392 2.2e-06 18.9 0.3 2 3 0.0024 0.14 3.0 0.0 3 33 163 193 161 198 0.89 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 GIDA PF01134.17 392 2.2e-06 18.9 0.3 3 3 0.041 2.5 -1.0 0.0 309 366 252 300 195 302 0.54 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 Pyr_redox_2 PF07992.9 201 4.1e-38 123.4 2.3 1 1 2.3e-38 1.4e-36 118.5 2.3 3 200 7 302 5 303 0.94 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_binding_7 PF13241.1 103 4.8e-06 19.0 0.0 1 2 0.0013 0.075 5.6 0.0 6 39 2 35 1 92 0.86 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_binding_7 PF13241.1 103 4.8e-06 19.0 0.0 2 2 2.7e-05 0.0016 10.9 0.0 7 45 159 213 153 275 0.66 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 1_18 - 270 ArsA_ATPase PF02374.10 305 1.8e-11 35.8 0.1 1 2 1e-12 6.2e-11 34.0 0.0 9 137 11 138 5 142 0.80 # 14269 # 15078 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_18 - 270 ArsA_ATPase PF02374.10 305 1.8e-11 35.8 0.1 2 2 0.053 3.2 -1.2 0.0 94 235 152 178 140 227 0.65 # 14269 # 15078 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 3_1 - 450 NAD_binding_8 PF13450.1 68 4.4e-08 25.3 0.3 1 2 2.8e-05 0.0017 10.6 0.0 1 30 8 37 8 46 0.87 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_binding_8 PF13450.1 68 4.4e-08 25.3 0.3 2 2 1.1e-05 0.00066 11.9 0.0 1 31 164 194 164 195 0.97 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 F420_oxidored PF03807.12 96 9.2e-06 18.3 0.1 1 2 1.5e-05 0.00091 11.9 0.0 4 36 8 36 5 42 0.88 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 F420_oxidored PF03807.12 96 9.2e-06 18.3 0.1 2 2 0.0064 0.38 3.5 0.0 1 30 161 187 161 236 0.77 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 FAD_binding_3 PF01494.14 356 1.6e-05 16.2 0.2 1 3 0.00037 0.022 5.9 0.0 5 35 7 37 3 42 0.89 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 FAD_binding_3 PF01494.14 356 1.6e-05 16.2 0.2 2 3 0.00054 0.033 5.3 0.0 5 35 163 193 161 202 0.92 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 FAD_binding_3 PF01494.14 356 1.6e-05 16.2 0.2 3 3 0.012 0.69 1.0 0.1 118 161 207 250 198 256 0.82 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 1_18 - 270 VirC1 PF07015.6 231 0.00026 12.3 0.6 1 1 7e-06 0.00042 11.6 0.1 3 45 4 46 2 70 0.86 # 14269 # 15078 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_18 - 270 Fer4_NifH PF00142.13 273 4.7e-09 27.9 0.6 1 2 1.2e-09 7.1e-08 24.1 0.1 8 59 11 63 7 78 0.87 # 14269 # 15078 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_18 - 270 Fer4_NifH PF00142.13 273 4.7e-09 27.9 0.6 2 2 0.0051 0.31 2.3 0.1 142 247 150 263 119 268 0.72 # 14269 # 15078 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 1_18 - 270 CbiA PF01656.18 195 7.6e-31 99.2 0.1 1 1 1.6e-32 9.5e-31 98.9 0.1 2 184 6 221 5 234 0.77 # 14269 # 15078 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 3_1 - 450 HI0933_like PF03486.9 409 1.2e-07 22.7 0.1 1 3 6e-05 0.0036 7.9 0.0 2 35 5 38 4 42 0.93 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 HI0933_like PF03486.9 409 1.2e-07 22.7 0.1 2 3 0.00042 0.025 5.1 0.0 2 36 161 195 160 197 0.91 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 HI0933_like PF03486.9 409 1.2e-07 22.7 0.1 3 3 0.0002 0.012 6.2 0.0 111 164 202 257 196 284 0.78 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 Thi4 PF01946.12 230 2e-05 16.0 0.0 1 2 2.3e-06 0.00014 13.2 0.0 21 57 7 43 3 62 0.88 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 Thi4 PF01946.12 230 2e-05 16.0 0.0 2 2 0.045 2.7 -0.8 0.0 20 49 162 191 146 194 0.85 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 2_8 - 54 rRNA_methylase PF06962.7 140 8.4e-18 56.6 0.0 1 1 1.5e-19 9.2e-18 56.5 0.0 91 140 1 50 1 50 0.99 # 5561 # 5722 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.389 3_1 - 450 Pyr_redox_3 PF13738.1 203 2.1e-12 39.7 0.1 1 2 7.2e-11 4.3e-09 28.9 0.0 1 198 7 190 7 195 0.75 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 Pyr_redox_3 PF13738.1 203 2.1e-12 39.7 0.1 2 2 0.00036 0.021 7.0 0.0 91 156 210 281 198 300 0.76 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_binding_2 PF03446.10 163 7.1e-06 18.1 0.1 1 2 0.00027 0.016 7.2 0.0 6 35 8 37 5 43 0.93 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_binding_2 PF03446.10 163 7.1e-06 18.1 0.1 2 2 0.00015 0.0088 8.1 0.0 3 73 161 245 159 282 0.71 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 1_18 - 270 AAA_31 PF13614.1 157 1.2e-11 37.0 0.0 1 1 4.5e-13 2.7e-11 35.8 0.0 9 151 11 160 4 165 0.77 # 14269 # 15078 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.414 3_1 - 450 NAD_Gly3P_dh_N PF01210.18 157 2.8e-07 22.6 0.0 1 2 6.3e-06 0.00038 12.4 0.0 4 33 8 37 5 83 0.89 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_Gly3P_dh_N PF01210.18 157 2.8e-07 22.6 0.0 2 2 0.00016 0.0096 7.8 0.0 2 36 162 196 161 231 0.89 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 2-Hacid_dh_C PF02826.14 178 5.8e-10 30.7 0.1 1 2 8.3e-05 0.005 8.2 0.1 41 70 8 37 3 47 0.92 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 2-Hacid_dh_C PF02826.14 178 5.8e-10 30.7 0.1 2 2 3e-08 1.8e-06 19.4 0.0 27 73 150 196 142 213 0.80 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 XdhC_C PF13478.1 136 4.6e-06 19.2 0.0 1 2 0.0046 0.28 3.7 0.0 2 35 7 40 7 71 0.85 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 XdhC_C PF13478.1 136 4.6e-06 19.2 0.0 2 2 6.1e-06 0.00037 13.0 0.0 1 58 162 221 162 232 0.82 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 2_13 - 84 AAA_30 PF13604.1 196 6.2e-05 14.8 0.0 1 1 1.1e-06 6.8e-05 14.7 0.0 46 88 10 52 3 74 0.83 # 8384 # 8635 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.456 3_1 - 450 ApbA PF02558.11 151 1.4e-06 20.0 0.6 1 2 2.3e-05 0.0014 10.3 0.0 3 31 8 36 7 45 0.93 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 ApbA PF02558.11 151 1.4e-06 20.0 0.6 2 2 0.00026 0.016 6.8 0.1 2 75 163 255 162 257 0.68 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 K_oxygenase PF13434.1 341 1.3e-09 29.5 0.0 1 3 0.058 3.5 -1.5 0.0 6 37 7 37 3 39 0.77 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 K_oxygenase PF13434.1 341 1.3e-09 29.5 0.0 2 3 3.1e-08 1.8e-06 19.2 0.0 131 205 106 174 94 209 0.81 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 K_oxygenase PF13434.1 341 1.3e-09 29.5 0.0 3 3 0.00016 0.0094 7.0 0.1 293 338 214 256 203 259 0.81 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 UDPG_MGDP_dh_N PF03721.9 185 2.7e-09 28.8 0.9 1 2 0.016 0.95 1.0 0.0 5 33 8 36 5 39 0.90 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 UDPG_MGDP_dh_N PF03721.9 185 2.7e-09 28.8 0.9 2 2 2.5e-09 1.5e-07 23.1 0.9 2 85 161 256 160 290 0.66 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_binding_10 PF13460.1 183 0.00035 12.8 0.6 1 3 0.00056 0.034 6.3 0.0 3 34 8 38 7 45 0.89 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_binding_10 PF13460.1 183 0.00035 12.8 0.6 2 3 0.073 4.4 -0.6 0.1 2 33 163 193 162 213 0.73 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_binding_10 PF13460.1 183 0.00035 12.8 0.6 3 3 0.0048 0.29 3.3 0.1 10 74 202 267 199 296 0.65 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 DAO PF01266.19 358 5.8e-07 20.8 1.4 1 3 3.9e-05 0.0023 9.0 0.0 3 32 7 37 5 91 0.89 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 DAO PF01266.19 358 5.8e-07 20.8 1.4 2 3 0.00066 0.04 4.9 0.2 2 31 162 191 161 197 0.85 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 DAO PF01266.19 358 5.8e-07 20.8 1.4 3 3 0.00077 0.046 4.7 0.1 150 202 203 258 198 410 0.67 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 5_1 - 415 Viral_helicase1 PF01443.13 234 5.9e-06 18.1 0.2 1 2 0.0098 0.59 1.7 0.0 157 208 99 151 77 160 0.65 # 79 # 1323 # -1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.496 5_1 - 415 Viral_helicase1 PF01443.13 234 5.9e-06 18.1 0.2 2 2 6.2e-07 3.7e-05 15.5 0.1 46 135 142 227 115 242 0.82 # 79 # 1323 # -1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.496 3_1 - 450 NAD_binding_9 PF13454.1 156 0.00011 14.2 2.9 1 3 0.00062 0.037 6.0 0.0 1 39 7 41 7 60 0.79 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_binding_9 PF13454.1 156 0.00011 14.2 2.9 2 3 0.039 2.3 0.1 0.1 1 34 163 191 163 197 0.71 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 NAD_binding_9 PF13454.1 156 0.00011 14.2 2.9 3 3 0.00041 0.024 6.6 0.2 114 155 214 257 201 258 0.69 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 Pyr_redox PF00070.22 80 2.9e-24 77.5 0.0 1 2 0.00054 0.032 6.9 0.0 3 34 7 38 5 43 0.92 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 Pyr_redox PF00070.22 80 2.9e-24 77.5 0.0 2 2 4.8e-23 2.9e-21 68.0 0.0 1 77 161 235 161 241 0.96 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 TrkA_N PF02254.13 116 1.7e-09 29.9 0.1 1 2 3e-07 1.8e-05 17.0 0.0 2 31 7 36 6 39 0.89 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 TrkA_N PF02254.13 116 1.7e-09 29.9 0.1 2 2 6.4e-05 0.0038 9.4 0.0 2 52 163 213 162 215 0.90 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 3_1 - 450 AlaDh_PNT_C PF01262.16 168 1.3e-05 17.0 0.0 1 1 4.6e-07 2.8e-05 15.9 0.0 17 60 156 199 144 239 0.87 # 526 # 1875 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.422 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/38af30be-4513-4669-9839-0e0d82e75a56 # Target file: checkm_output/bins/pGCA_001988935.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001988935.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/38af30be-4513-4669-9839-0e0d82e75a56 checkm_output/bins/pGCA_001988935.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:47:42 2020 # [ok]