# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_5 - 344 Mg_chelatase PF01078.16 207 4.8e-07 22.9 0.0 1 1 3.9e-09 7.2e-07 22.3 0.0 1 49 150 198 150 247 0.87 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 2_5 - 344 IstB_IS21 PF01695.12 178 0.0009 12.4 0.2 1 1 1.7e-05 0.0032 10.6 0.1 44 62 168 186 163 192 0.88 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 3_12 - 219 MipZ PF09140.6 261 7.1e-15 48.5 1.3 1 1 4.8e-15 2.9e-13 43.2 1.3 2 138 3 121 2 127 0.83 # 10273 # 10929 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.513 1_19 - 256 MipZ PF09140.6 261 1.9e-12 40.5 0.5 1 1 2.9e-13 1.8e-11 37.4 0.5 2 131 3 147 2 157 0.79 # 14474 # 15241 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 12_1 - 138 MipZ PF09140.6 261 1.2e-05 18.3 0.1 1 1 3.1e-07 1.9e-05 17.6 0.1 6 52 8 54 4 119 0.88 # 125 # 538 # -1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.507 1_19 - 256 CoaE PF01121.15 180 0.0019 11.4 0.0 1 1 2.1e-05 0.0038 10.4 0.0 19 73 82 136 80 140 0.93 # 14474 # 15241 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 1_1 - 267 UvrD_C_2 PF13538.1 104 4.4e-12 39.9 0.0 1 1 5.9e-14 1.1e-11 38.6 0.0 2 103 89 195 88 196 0.78 # 2 # 802 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 1_15 - 897 DUF87 PF01935.12 229 0.00016 15.3 0.0 1 1 5e-06 0.00046 13.8 0.0 19 47 519 547 516 554 0.89 # 9851 # 12541 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 4_2 - 518 DUF87 PF01935.12 229 0.00098 12.7 0.0 1 1 1.7e-05 0.0016 12.1 0.0 25 73 140 185 126 290 0.84 # 2265 # 3818 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 4_1 - 752 AAA_22 PF13401.1 131 1.2e-06 22.5 0.7 1 2 0.016 1.5 2.7 0.1 37 111 161 234 113 264 0.76 # 1 # 2256 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 4_1 - 752 AAA_22 PF13401.1 131 1.2e-06 22.5 0.7 2 2 5.2e-07 4.8e-05 17.3 0.1 5 125 531 645 527 651 0.85 # 1 # 2256 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 2_5 - 344 AAA_22 PF13401.1 131 0.00041 14.3 0.0 1 1 7.6e-06 0.0007 13.5 0.0 4 37 171 215 166 259 0.75 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 2_5 - 344 ATP_bind_1 PF03029.12 238 0.00043 13.6 0.0 1 1 4e-06 0.00073 12.9 0.0 1 27 176 201 176 206 0.85 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_50 - 557 DNA_methylase PF00145.12 335 8e-12 38.6 0.0 1 2 4.9e-10 9e-08 25.3 0.0 44 164 85 210 6 234 0.77 # 31519 # 33189 # 1 # ID=1_50;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_50 - 557 DNA_methylase PF00145.12 335 8e-12 38.6 0.0 2 2 1.4e-05 0.0026 10.6 0.0 280 332 463 519 382 522 0.77 # 31519 # 33189 # 1 # ID=1_50;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 3_12 - 219 SRP54 PF00448.17 196 0.0015 11.8 0.5 1 1 2.2e-05 0.004 10.3 0.5 5 96 4 94 1 106 0.75 # 10273 # 10929 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.513 2_5 - 344 AAA_17 PF13207.1 121 5.3e-05 17.8 0.0 1 1 8.5e-07 0.00016 16.3 0.0 2 22 174 194 173 238 0.81 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 3_12 - 219 ArsA_ATPase PF02374.10 305 1.2e-06 21.5 0.3 1 1 2.2e-08 2.1e-06 20.7 0.3 4 49 3 50 1 64 0.85 # 10273 # 10929 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.513 1_19 - 256 ArsA_ATPase PF02374.10 305 1.3e-06 21.4 0.4 1 2 2.4e-07 2.2e-05 17.4 0.1 1 47 1 47 1 110 0.70 # 14474 # 15241 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 1_19 - 256 ArsA_ATPase PF02374.10 305 1.3e-06 21.4 0.4 2 2 0.009 0.83 2.3 0.0 121 136 104 124 93 126 0.71 # 14474 # 15241 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 4_1 - 752 PhoH PF02562.11 205 7.5e-08 25.6 1.6 1 2 1.4e-06 0.00025 14.0 0.2 6 45 515 555 512 561 0.85 # 1 # 2256 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 4_1 - 752 PhoH PF02562.11 205 7.5e-08 25.6 1.6 2 2 2.3e-05 0.0043 10.0 0.1 120 163 609 653 596 695 0.72 # 1 # 2256 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_7 - 343 T2SE PF00437.15 272 6.8e-65 212.4 0.0 1 1 8.9e-67 8.2e-65 212.1 0.0 4 267 13 322 10 325 0.97 # 3899 # 4927 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 2_5 - 344 T2SE PF00437.15 272 2.5e-42 138.4 0.0 1 1 3.2e-44 2.9e-42 138.1 0.0 8 269 25 317 19 320 0.96 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 12_1 - 138 Methyltransf_24 PF13578.1 106 0.00062 14.4 0.0 1 1 4.1e-06 0.00076 14.1 0.0 14 89 19 101 5 117 0.65 # 125 # 538 # -1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.507 2_5 - 344 Zeta_toxin PF06414.7 201 0.00019 14.3 0.0 1 1 1.6e-06 0.0003 13.7 0.0 15 69 170 227 161 246 0.80 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_19 - 256 VirC1 PF07015.6 231 0.00054 12.8 0.0 1 1 1.7e-05 0.0016 11.3 0.1 1 40 1 40 1 46 0.87 # 14474 # 15241 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 3_12 - 219 VirC1 PF07015.6 231 0.00083 12.2 0.2 1 1 3.8e-05 0.0035 10.2 0.2 4 191 4 194 1 207 0.73 # 10273 # 10929 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.513 3_12 - 219 Fer4_NifH PF00142.13 273 0.00015 14.8 0.0 1 1 1.1e-06 0.00021 14.3 0.0 7 45 9 47 1 88 0.92 # 10273 # 10929 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.513 4_1 - 752 AAA_16 PF13191.1 185 0.00014 15.6 0.3 1 1 2.5e-06 0.00046 14.0 0.0 14 77 520 587 516 680 0.80 # 1 # 2256 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 2_5 - 344 AAA_18 PF13238.1 129 9.7e-05 16.5 0.0 1 1 2e-06 0.00018 15.6 0.0 1 22 174 195 174 225 0.73 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_51 - 146 AAA_18 PF13238.1 129 0.0015 12.6 1.7 1 1 2.3e-05 0.0021 12.2 1.7 50 119 9 78 4 95 0.91 # 33233 # 33670 # 1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_19 - 256 CbiA PF01656.18 195 5.2e-30 98.0 0.0 1 1 1.6e-31 7.5e-30 97.5 0.0 1 166 4 190 4 210 0.82 # 14474 # 15241 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 3_12 - 219 CbiA PF01656.18 195 1.1e-17 57.9 0.0 1 1 3.1e-19 1.4e-17 57.4 0.0 2 193 5 185 4 187 0.71 # 10273 # 10929 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.513 12_1 - 138 CbiA PF01656.18 195 6.8e-13 42.2 0.2 1 1 3.4e-14 1.6e-12 41.0 0.2 2 125 6 112 5 134 0.79 # 125 # 538 # -1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.507 4_5 - 242 CbiA PF01656.18 195 2.8e-05 17.3 0.0 1 2 0.062 2.8 1.0 0.0 1 16 4 19 4 22 0.90 # 5088 # 5813 # 1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.510 4_5 - 242 CbiA PF01656.18 195 2.8e-05 17.3 0.0 2 2 5.3e-06 0.00024 14.3 0.0 111 170 89 148 29 182 0.77 # 5088 # 5813 # 1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.510 2_25 - 93 Methyltransf_30 PF05430.6 124 0.00054 13.4 0.0 1 1 4.1e-06 0.00075 13.0 0.0 66 110 29 72 25 87 0.81 # 20315 # 20593 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.534 2_5 - 344 AAA_29 PF13555.1 62 0.0014 11.9 0.0 1 1 1.9e-05 0.0035 10.7 0.0 9 38 160 186 157 194 0.77 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 2_5 - 344 AAA PF00004.24 132 0.0014 12.7 0.0 1 1 1.6e-05 0.003 11.6 0.0 1 35 174 208 174 250 0.81 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 2_9 - 551 TraG-D_C PF12696.2 128 4.1e-28 91.6 0.0 1 1 1.1e-29 6.4e-28 91.0 0.0 2 127 309 431 308 432 0.88 # 5582 # 7234 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.572 4_2 - 518 TraG-D_C PF12696.2 128 7.7e-19 61.6 0.0 1 1 2.7e-20 1.6e-18 60.6 0.0 1 127 363 479 363 480 0.87 # 2265 # 3818 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 3_22 - 1125 TraG-D_C PF12696.2 128 4.9e-07 23.5 0.0 1 1 1.4e-08 8.6e-07 22.7 0.0 1 83 799 880 799 922 0.80 # 18283 # 21657 # -1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.606 1_19 - 256 AAA_31 PF13614.1 157 2.6e-12 40.7 0.0 1 1 5.1e-14 4.7e-12 39.9 0.0 1 156 2 152 2 153 0.86 # 14474 # 15241 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.487 3_12 - 219 AAA_31 PF13614.1 157 8.3e-07 22.8 0.1 1 2 9.4e-07 8.6e-05 16.3 0.0 5 55 6 55 2 73 0.83 # 10273 # 10929 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.513 3_12 - 219 AAA_31 PF13614.1 157 8.3e-07 22.8 0.1 2 2 0.003 0.27 4.9 0.0 112 153 74 116 60 120 0.81 # 10273 # 10929 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.513 4_1 - 752 AAA_30 PF13604.1 196 6.8e-54 176.2 5.3 1 1 1e-55 1.8e-53 174.7 5.3 1 192 513 707 513 711 0.97 # 1 # 2256 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 2_5 - 344 FtsK_SpoIIIE PF01580.13 205 3e-06 20.6 0.0 1 1 5.7e-08 5.3e-06 19.8 0.0 24 59 159 192 139 194 0.78 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 4_2 - 518 FtsK_SpoIIIE PF01580.13 205 0.00011 15.5 0.0 1 1 2.9e-06 0.00027 14.2 0.0 20 69 114 165 99 180 0.78 # 2265 # 3818 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 4_1 - 752 AAA_19 PF13245.1 76 1.1e-09 31.7 0.2 1 2 1.9e-10 1.8e-08 27.9 0.1 1 74 520 597 520 600 0.83 # 1 # 2256 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 4_1 - 752 AAA_19 PF13245.1 76 1.1e-09 31.7 0.2 2 2 0.075 6.9 0.3 0.0 44 62 730 748 714 751 0.79 # 1 # 2256 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 2_5 - 344 AAA_19 PF13245.1 76 0.00082 12.9 0.0 1 1 2.4e-05 0.0022 11.5 0.0 9 25 171 186 165 195 0.74 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_15 - 897 AAA_10 PF12846.2 304 3e-20 66.6 0.0 1 1 2e-21 7.3e-20 65.3 0.0 2 294 524 798 523 805 0.86 # 9851 # 12541 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 4_2 - 518 AAA_10 PF12846.2 304 2.5e-12 40.6 0.3 1 1 9.7e-13 3.6e-11 36.8 0.3 2 301 139 443 138 446 0.71 # 2265 # 3818 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 3_22 - 1125 AAA_10 PF12846.2 304 6e-08 26.2 0.4 1 1 1.1e-08 4e-07 23.5 0.0 108 297 652 873 600 879 0.67 # 18283 # 21657 # -1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.606 3_12 - 219 AAA_10 PF12846.2 304 0.00023 14.4 0.0 1 1 8.2e-06 0.0003 14.0 0.0 5 47 4 50 2 136 0.87 # 10273 # 10929 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.513 2_5 - 344 AAA_10 PF12846.2 304 0.00046 13.4 0.0 1 1 2.5e-05 0.00093 12.4 0.0 2 33 172 203 171 213 0.81 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_1 - 267 Viral_helicase1 PF01443.13 234 1.4e-06 21.7 0.0 1 1 2.7e-08 2.4e-06 20.9 0.0 183 233 149 196 71 197 0.79 # 2 # 802 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 2_5 - 344 Viral_helicase1 PF01443.13 234 0.0016 11.7 0.0 1 1 3.2e-05 0.0029 10.9 0.0 1 30 174 200 174 228 0.78 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 4_1 - 752 DUF2075 PF09848.4 352 8.2e-05 15.4 0.4 1 1 9.1e-07 0.00017 14.4 0.4 4 97 533 622 530 675 0.75 # 1 # 2256 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 4_2 - 518 TrwB_AAD_bind PF10412.4 386 1.4e-122 402.8 0.0 1 1 3.5e-124 1.6e-122 402.6 0.0 2 386 125 499 124 499 0.98 # 2265 # 3818 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 2_9 - 551 TrwB_AAD_bind PF10412.4 386 1.2e-24 80.3 0.0 1 2 0.0017 0.078 5.3 0.0 20 127 46 160 37 169 0.68 # 5582 # 7234 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.572 2_9 - 551 TrwB_AAD_bind PF10412.4 386 1.2e-24 80.3 0.0 2 2 4.9e-24 2.3e-22 72.9 0.0 245 378 309 443 261 452 0.90 # 5582 # 7234 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.572 3_22 - 1125 TrwB_AAD_bind PF10412.4 386 0.00033 13.1 0.0 1 1 1.1e-05 0.00052 12.4 0.0 248 371 803 926 786 934 0.70 # 18283 # 21657 # -1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.606 1_7 - 343 TrwB_AAD_bind PF10412.4 386 0.00092 11.6 0.0 1 1 3.1e-05 0.0014 11.0 0.0 15 50 175 210 171 213 0.89 # 3899 # 4927 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 1_20 - 316 Kinesin-relat_1 PF12711.2 86 0.066 7.5 8.2 1 1 1.5e-05 0.0027 11.9 0.5 2 43 269 310 268 312 0.94 # 15252 # 16199 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.508 2_9 - 551 T4SS-DNA_transf PF02534.9 469 1.5e-75 248.3 0.0 1 2 8.4e-77 7.7e-75 245.9 0.0 31 455 23 466 3 471 0.82 # 5582 # 7234 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.572 2_9 - 551 T4SS-DNA_transf PF02534.9 469 1.5e-75 248.3 0.0 2 2 0.048 4.4 -0.6 0.0 85 116 485 517 481 532 0.81 # 5582 # 7234 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.572 4_2 - 518 T4SS-DNA_transf PF02534.9 469 6.1e-20 64.9 0.0 1 1 1.7e-21 1.6e-19 63.5 0.0 222 444 288 498 104 510 0.90 # 2265 # 3818 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.529 1_15 - 897 Pox_A32 PF04665.7 241 0.0011 12.0 0.0 1 1 2.5e-05 0.0023 11.0 0.0 15 49 525 559 511 568 0.86 # 9851 # 12541 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 2_5 - 344 Pox_A32 PF04665.7 241 0.0012 11.9 0.0 1 1 1.9e-05 0.0017 11.4 0.0 13 42 171 200 161 225 0.79 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 4_1 - 752 PIF1 PF05970.9 364 0.00042 13.0 0.1 1 1 4.2e-06 0.00077 12.2 0.1 7 125 519 631 513 646 0.80 # 1 # 2256 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 2_5 - 344 AAA_24 PF13479.1 213 0.0005 13.4 0.0 1 1 6.6e-06 0.0012 12.2 0.0 3 23 171 191 169 197 0.87 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 3_12 - 219 AAA_25 PF13481.1 194 0.00017 14.8 0.2 1 1 9.1e-06 0.00084 12.5 0.2 41 65 10 35 4 90 0.83 # 10273 # 10929 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.513 2_37 - 317 AAA_25 PF13481.1 194 0.0014 11.8 0.0 1 1 3.2e-05 0.003 10.7 0.0 38 97 137 196 131 228 0.78 # 31765 # 32715 # 1 # ID=2_37;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.651 2_5 - 344 AAA_28 PF13521.1 163 0.00023 14.9 0.0 1 1 6.4e-06 0.0012 12.6 0.0 1 20 173 192 173 212 0.77 # 2637 # 3668 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_1 - 267 Herpes_Helicase PF02689.9 819 0.00023 12.7 0.1 1 1 1.6e-06 0.00029 12.4 0.1 742 790 151 201 136 232 0.73 # 2 # 802 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/2d67fe80-f27e-470a-981c-e1b3078eeac4 # Target file: checkm_output/bins/pGCA_001913235.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001913235.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/2d67fe80-f27e-470a-981c-e1b3078eeac4 checkm_output/bins/pGCA_001913235.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:47:14 2020 # [ok]