# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_109 - 290 NAD_binding_3 PF03447.11 117 5.9e-07 23.7 1.1 1 2 2.5e-08 4.5e-06 20.8 0.1 1 77 13 87 13 97 0.85 # 96870 # 97739 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.722 1_109 - 290 NAD_binding_3 PF03447.11 117 5.9e-07 23.7 1.1 2 2 0.032 5.8 1.1 0.1 49 68 240 257 207 264 0.77 # 96870 # 97739 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.722 1_152 - 146 IstB_IS21 PF01695.12 178 2.6e-35 115.2 0.0 1 1 1.6e-37 3e-35 115.0 0.0 57 178 2 122 1 122 0.98 # 133005 # 133442 # 1 # ID=1_152;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.683 1_54 - 304 GIDA PF01134.17 392 6.7e-05 15.6 2.6 1 2 3.7e-07 6.7e-05 15.6 2.6 1 28 9 36 9 68 0.85 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 GIDA PF01134.17 392 6.7e-05 15.6 2.6 2 2 0.042 7.5 -1.1 0.0 129 150 98 119 73 125 0.82 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 Pyr_redox_2 PF07992.9 201 1.2e-10 35.3 0.0 1 1 1.4e-12 2.6e-10 34.2 0.0 1 198 9 274 9 277 0.76 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_163 - 400 AAA_22 PF13401.1 131 2e-15 50.8 0.0 1 1 6.7e-17 6e-15 49.3 0.0 6 124 189 300 185 306 0.86 # 140548 # 141747 # 1 # ID=1_163;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.732 1_165 - 248 AAA_22 PF13401.1 131 9.9e-15 48.6 0.0 1 1 1.7e-16 1.5e-14 48.0 0.0 4 130 36 156 32 157 0.89 # 143474 # 144217 # 1 # ID=1_165;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.706 1_163 - 400 DUF927 PF06048.6 286 0.00091 12.2 0.0 1 1 9.3e-06 0.0017 11.4 0.0 190 217 184 211 166 221 0.80 # 140548 # 141747 # 1 # ID=1_163;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.732 1_54 - 304 Trp_halogenase PF04820.9 454 0.0059 8.9 3.7 1 2 2.5e-05 0.0045 9.3 1.9 1 37 9 42 9 49 0.84 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 Trp_halogenase PF04820.9 454 0.0059 8.9 3.7 2 2 0.058 10 -1.8 0.0 216 238 88 110 75 130 0.67 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_109 - 290 Semialdhyde_dh PF01118.19 121 8.3e-12 39.2 0.1 1 1 1.2e-13 2.1e-11 37.9 0.1 1 114 8 113 8 119 0.87 # 96870 # 97739 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.722 1_175 - 842 Helicase_C PF00271.26 78 4.4e-07 23.5 0.1 1 1 1.4e-08 8.6e-07 22.5 0.1 12 77 326 402 321 403 0.90 # 152596 # 155121 # -1 # ID=1_175;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.715 1_2 - 886 Helicase_C PF00271.26 78 5.3e-07 23.2 0.2 1 1 1.9e-08 1.1e-06 22.2 0.2 12 77 371 447 366 448 0.89 # 992 # 3649 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.711 1_20 - 248 Helicase_C PF00271.26 78 0.0003 14.4 0.0 1 1 1.1e-05 0.00067 13.3 0.0 57 78 3 24 1 24 0.90 # 24384 # 25127 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.769 1_165 - 248 PhoH PF02562.11 205 0.00081 12.4 0.0 1 1 8e-06 0.0014 11.6 0.0 10 60 27 78 19 92 0.82 # 143474 # 144217 # 1 # ID=1_165;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.706 1_152 - 146 AFG1_ATPase PF03969.11 362 1.9e-05 17.3 0.0 1 1 1.1e-07 2e-05 17.2 0.0 71 184 1 113 1 144 0.73 # 133005 # 133442 # 1 # ID=1_152;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.683 1_165 - 248 T2SE PF00437.15 272 4.7e-05 16.1 0.0 1 1 4.2e-07 7.6e-05 15.4 0.0 118 206 26 120 9 133 0.72 # 143474 # 144217 # 1 # ID=1_165;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.706 1_109 - 290 Shikimate_DH PF01488.15 135 0.00039 14.3 0.0 1 1 5.3e-06 0.00095 13.0 0.0 12 112 6 102 3 113 0.83 # 96870 # 97739 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.722 1_54 - 304 NAD_binding_8 PF13450.1 68 2.3e-05 18.1 1.8 1 1 2.2e-07 4e-05 17.4 0.2 1 37 12 47 12 66 0.88 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 FAD_binding_3 PF01494.14 356 3e-05 16.9 1.6 1 2 5.4e-07 9.6e-05 15.2 1.4 2 33 8 39 7 42 0.90 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 FAD_binding_3 PF01494.14 356 3e-05 16.9 1.6 2 2 0.065 12 -1.5 0.0 287 298 260 271 252 272 0.90 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_171 - 587 SMC_N PF02463.14 220 0.00025 14.1 0.0 1 1 6e-06 0.0011 12.0 0.0 32 65 38 71 35 103 0.83 # 148392 # 150152 # -1 # ID=1_171;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_17 - 245 Fer4_NifH PF00142.13 273 0.0004 13.3 0.1 1 2 7.8e-05 0.014 8.3 0.0 6 26 9 29 4 54 0.87 # 18317 # 19051 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.637 1_17 - 245 Fer4_NifH PF00142.13 273 0.0004 13.3 0.1 2 2 0.0035 0.64 2.8 0.0 185 235 172 222 149 242 0.71 # 18317 # 19051 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.637 1_165 - 248 AAA_16 PF13191.1 185 1.6e-08 28.5 0.4 1 1 5.9e-09 3.5e-07 24.1 0.1 26 185 38 146 20 146 0.86 # 143474 # 144217 # 1 # ID=1_165;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.706 1_163 - 400 AAA_16 PF13191.1 185 6e-08 26.6 1.6 1 1 5.1e-07 3e-05 17.8 1.6 14 179 175 291 170 297 0.67 # 140548 # 141747 # 1 # ID=1_163;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.732 1_152 - 146 AAA_16 PF13191.1 185 0.0023 11.6 1.9 1 1 0.00022 0.013 9.2 1.9 34 98 2 72 1 124 0.64 # 133005 # 133442 # 1 # ID=1_152;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.683 1_171 - 587 AAA_23 PF13476.1 202 3.3e-07 24.5 0.1 1 1 1.3e-08 2.3e-06 21.8 0.1 13 194 13 289 8 438 0.61 # 148392 # 150152 # -1 # ID=1_171;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_109 - 290 GFO_IDH_MocA PF01408.17 120 3.2e-05 18.2 0.1 1 1 3.9e-07 6.9e-05 17.1 0.1 1 86 7 93 7 97 0.84 # 96870 # 97739 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.722 1_17 - 245 CbiA PF01656.18 195 3.3e-13 43.2 0.2 1 1 9.5e-15 1.7e-12 40.9 0.2 2 174 6 185 5 205 0.76 # 18317 # 19051 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.637 1_163 - 400 AAA_14 PF13173.1 128 0.00062 13.4 0.0 1 1 1.7e-05 0.0015 12.2 0.0 58 119 259 321 187 324 0.66 # 140548 # 141747 # 1 # ID=1_163;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.732 1_165 - 248 AAA_14 PF13173.1 128 0.0014 12.3 0.0 1 1 2.7e-05 0.0024 11.5 0.0 3 96 37 149 35 159 0.72 # 143474 # 144217 # 1 # ID=1_165;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.706 1_54 - 304 HI0933_like PF03486.9 409 1.9e-06 20.3 3.4 1 2 1.2e-08 2.1e-06 20.1 1.6 2 41 9 47 8 57 0.90 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 HI0933_like PF03486.9 409 1.9e-06 20.3 3.4 2 2 0.021 3.9 -0.5 0.0 142 170 97 123 63 137 0.73 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_17 - 245 AAA_29 PF13555.1 62 0.00015 15.0 0.2 1 2 0.0043 0.77 3.1 0.1 32 39 12 19 3 33 0.83 # 18317 # 19051 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.637 1_17 - 245 AAA_29 PF13555.1 62 0.00015 15.0 0.2 2 2 5.3e-05 0.0096 9.3 0.0 35 50 115 130 113 135 0.89 # 18317 # 19051 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.637 1_54 - 304 FAD_binding_2 PF00890.19 417 3.6e-06 19.7 4.8 1 1 2e-08 3.6e-06 19.7 4.8 1 33 9 41 9 51 0.91 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_152 - 146 AAA PF00004.24 132 0.001 13.0 0.0 1 1 8.5e-06 0.0015 12.5 0.0 8 111 2 93 1 120 0.66 # 133005 # 133442 # 1 # ID=1_152;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.683 1_152 - 146 Bac_DnaA PF00308.13 219 4.5e-08 26.7 0.0 1 1 3.6e-10 6.6e-08 26.2 0.0 43 143 1 97 1 101 0.90 # 133005 # 133442 # 1 # ID=1_152;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.683 1_54 - 304 Thi4 PF01946.12 230 8.3e-08 25.3 0.6 1 1 4.6e-10 8.3e-08 25.3 0.6 17 62 7 51 3 54 0.89 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 Pyr_redox_3 PF13738.1 203 4.1e-09 30.5 5.1 1 3 8.1e-09 1.5e-06 22.2 1.5 1 39 11 47 11 79 0.86 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 Pyr_redox_3 PF13738.1 203 4.1e-09 30.5 5.1 2 3 0.014 2.5 1.8 0.2 167 181 109 123 84 127 0.77 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 Pyr_redox_3 PF13738.1 203 4.1e-09 30.5 5.1 3 3 0.00054 0.097 6.4 0.0 73 140 164 243 147 288 0.76 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_17 - 245 MMR_HSR1 PF01926.18 116 7.9e-05 16.4 0.0 1 1 9.1e-07 0.00016 15.3 0.0 10 116 14 168 11 168 0.60 # 18317 # 19051 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.637 1_17 - 245 AAA_31 PF13614.1 157 0.0015 12.2 0.3 1 2 0.0016 0.29 4.8 0.2 1 26 3 28 3 34 0.88 # 18317 # 19051 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.637 1_17 - 245 AAA_31 PF13614.1 157 0.0015 12.2 0.3 2 2 0.0014 0.26 4.9 0.0 126 152 115 141 114 143 0.86 # 18317 # 19051 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.637 1_55 - 58 2-Hacid_dh_C PF02826.14 178 0.00021 14.2 0.0 1 1 1.2e-06 0.00021 14.2 0.0 36 76 3 43 1 55 0.83 # 50448 # 50621 # -1 # ID=1_55;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.655 1_165 - 248 AAA_30 PF13604.1 196 0.00063 13.1 0.0 1 1 7.8e-06 0.0014 11.9 0.0 13 56 32 73 25 151 0.72 # 143474 # 144217 # 1 # ID=1_165;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.706 1_54 - 304 Lycopene_cycl PF05834.7 374 5.2e-06 19.3 2.9 1 2 4.8e-07 8.7e-05 15.2 1.0 1 33 9 39 9 48 0.89 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 Lycopene_cycl PF05834.7 374 5.2e-06 19.3 2.9 2 2 0.0014 0.24 3.9 0.0 99 145 78 124 61 133 0.76 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 K_oxygenase PF13434.1 341 0.00054 12.6 0.7 1 3 0.0062 1.1 1.7 0.1 4 34 9 38 7 49 0.78 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 K_oxygenase PF13434.1 341 0.00054 12.6 0.7 2 3 0.00073 0.13 4.8 0.0 142 166 104 128 94 143 0.85 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 K_oxygenase PF13434.1 341 0.00054 12.6 0.7 3 3 0.0031 0.55 2.7 0.0 118 160 202 244 194 254 0.88 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_165 - 248 AAA_19 PF13245.1 76 1.7e-06 21.5 0.1 1 1 4.2e-08 3.8e-06 20.4 0.1 8 75 35 104 27 105 0.74 # 143474 # 144217 # 1 # ID=1_165;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.706 1_2 - 886 AAA_19 PF13245.1 76 0.011 9.2 3.8 1 1 0.00011 0.0098 9.4 0.8 13 62 35 78 26 100 0.79 # 992 # 3649 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.711 1_49 - 160 TOBE PF03459.12 64 2.2e-05 18.3 0.6 1 2 1.4e-06 0.00025 14.9 0.1 36 60 70 94 68 95 0.92 # 45485 # 45964 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.733 1_49 - 160 TOBE PF03459.12 64 2.2e-05 18.3 0.6 2 2 0.029 5.3 1.0 0.0 27 43 98 114 97 117 0.75 # 45485 # 45964 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.733 1_54 - 304 FAD_oxidored PF12831.2 428 5.2e-11 35.9 4.3 1 1 3.8e-13 6.9e-11 35.5 4.3 1 69 9 77 9 122 0.84 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_171 - 587 DNA_photolyase PF00875.13 165 0.016 8.7 7.0 1 2 0.0026 0.47 3.9 0.2 39 67 326 353 310 372 0.79 # 148392 # 150152 # -1 # ID=1_171;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_171 - 587 DNA_photolyase PF00875.13 165 0.016 8.7 7.0 2 2 0.00038 0.069 6.6 1.8 52 112 375 437 372 442 0.91 # 148392 # 150152 # -1 # ID=1_171;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_54 - 304 DAO PF01266.19 358 1.4e-06 21.1 3.0 1 2 1.6e-08 1.4e-06 21.1 3.0 1 35 9 43 9 61 0.90 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 DAO PF01266.19 358 1.4e-06 21.1 3.0 2 2 0.017 1.5 1.3 0.4 148 203 63 121 47 130 0.74 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_149 - 198 DAO PF01266.19 358 0.00085 12.0 0.0 1 1 9.4e-06 0.00085 12.0 0.0 53 124 81 150 28 179 0.85 # 130449 # 131042 # 1 # ID=1_149;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.630 1_109 - 290 ThiF PF00899.16 136 0.0045 10.5 4.5 1 3 8.5e-05 0.015 8.8 1.2 2 32 6 36 5 88 0.90 # 96870 # 97739 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.722 1_109 - 290 ThiF PF00899.16 136 0.0045 10.5 4.5 2 3 0.088 16 -0.9 0.0 92 124 69 100 54 109 0.70 # 96870 # 97739 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.722 1_109 - 290 ThiF PF00899.16 136 0.0045 10.5 4.5 3 3 0.024 4.3 0.9 0.0 58 82 223 247 220 284 0.67 # 96870 # 97739 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.722 1_2 - 886 ResIII PF04851.10 184 4.6e-16 52.9 0.0 1 1 5.2e-17 4.7e-15 49.6 0.0 8 183 11 209 1 210 0.75 # 992 # 3649 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.711 1_175 - 842 ResIII PF04851.10 184 2.5e-06 21.1 0.0 1 1 8.9e-08 8e-06 19.5 0.0 42 183 3 164 1 165 0.72 # 152596 # 155121 # -1 # ID=1_175;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.715 1_163 - 400 DUF2075 PF09848.4 352 3.8e-05 16.5 0.0 1 1 6.2e-07 5.6e-05 15.9 0.0 3 95 189 274 187 281 0.83 # 140548 # 141747 # 1 # ID=1_163;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.732 1_165 - 248 DUF2075 PF09848.4 352 5.6e-05 15.9 0.0 1 1 8.2e-07 7.4e-05 15.5 0.0 2 99 37 128 36 151 0.85 # 143474 # 144217 # 1 # ID=1_165;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.706 1_54 - 304 NAD_binding_9 PF13454.1 156 1.9e-06 21.5 1.9 1 2 3.2e-05 0.0058 10.1 0.2 2 43 12 47 11 61 0.82 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 NAD_binding_9 PF13454.1 156 1.9e-06 21.5 1.9 2 2 2.7e-05 0.0048 10.4 0.1 103 155 67 119 60 120 0.87 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_2 - 886 DEAD PF00270.24 169 5.7e-09 29.4 0.0 1 1 1.2e-10 2.2e-08 27.5 0.0 15 161 32 207 22 212 0.70 # 992 # 3649 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.711 1_54 - 304 Pyr_redox PF00070.22 80 5.4e-05 17.3 2.0 1 2 3.6e-06 0.00032 14.8 0.7 2 30 10 38 9 41 0.94 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 Pyr_redox PF00070.22 80 5.4e-05 17.3 2.0 2 2 0.075 6.7 1.0 0.0 2 12 112 122 111 127 0.85 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_109 - 290 Pyr_redox PF00070.22 80 0.00019 15.5 0.1 1 1 4.8e-06 0.00044 14.4 0.1 1 21 8 28 8 43 0.81 # 96870 # 97739 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.722 1_153 - 175 tRNA_anti_2 PF13742.1 99 0.0019 11.9 0.0 1 1 1.4e-05 0.0026 11.4 0.0 68 97 72 99 27 101 0.83 # 133439 # 133963 # -1 # ID=1_153;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.691 1_109 - 290 DapB_N PF01113.15 124 1.8e-05 18.4 0.0 1 1 2.2e-07 4e-05 17.3 0.0 2 94 8 96 7 100 0.84 # 96870 # 97739 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.722 1_54 - 304 Amino_oxidase PF01593.19 450 0.0014 11.4 3.9 1 3 7.5e-05 0.014 8.2 0.1 2 33 18 48 17 54 0.94 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 Amino_oxidase PF01593.19 450 0.0014 11.4 3.9 2 3 0.0018 0.32 3.6 0.1 240 289 96 152 80 156 0.87 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 Amino_oxidase PF01593.19 450 0.0014 11.4 3.9 3 3 0.058 11 -1.3 0.1 417 446 258 291 229 291 0.72 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_163 - 400 UPF0079 PF02367.12 123 0.00042 13.7 0.0 1 1 4.7e-06 0.00085 12.7 0.0 7 33 179 205 174 217 0.85 # 140548 # 141747 # 1 # ID=1_163;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.732 1_54 - 304 AlaDh_PNT_C PF01262.16 168 0.0011 12.2 2.6 1 2 9.4e-06 0.0017 11.7 0.6 21 50 8 37 4 41 0.91 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_54 - 304 AlaDh_PNT_C PF01262.16 168 0.0011 12.2 2.6 2 2 0.05 9.1 -0.5 0.1 16 33 105 122 95 127 0.78 # 49593 # 50504 # 1 # ID=1_54;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669 1_163 - 400 AAA_24 PF13479.1 213 0.0026 11.1 0.1 1 1 4.4e-05 0.0079 9.5 0.0 6 23 190 207 186 212 0.86 # 140548 # 141747 # 1 # ID=1_163;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.732 1_165 - 248 NACHT PF05729.7 166 0.00072 13.0 0.0 1 2 0.0003 0.027 7.9 0.0 2 27 38 63 37 85 0.84 # 143474 # 144217 # 1 # ID=1_165;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.706 1_165 - 248 NACHT PF05729.7 166 0.00072 13.0 0.0 2 2 0.0094 0.85 3.0 0.0 51 99 110 159 95 188 0.78 # 143474 # 144217 # 1 # ID=1_165;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.706 1_163 - 400 NACHT PF05729.7 166 0.0012 12.2 0.0 1 1 2.7e-05 0.0025 11.2 0.0 2 18 189 205 188 213 0.87 # 140548 # 141747 # 1 # ID=1_163;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.732 1_163 - 400 AAA_5 PF07728.9 139 5.2e-05 16.7 0.0 1 1 1.1e-06 0.0002 14.9 0.0 2 90 190 287 189 294 0.74 # 140548 # 141747 # 1 # ID=1_163;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.732 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/9169c7de-088b-449f-a14f-0caae802139a # Target file: checkm_output/bins/pGCA_001886595.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001886595.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9169c7de-088b-449f-a14f-0caae802139a checkm_output/bins/pGCA_001886595.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:46:58 2020 # [ok]