# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 60 RRM_5 PF13893.1 56 5.9e-05 12.3 0.0 1 1 9.7e-06 7.8e-05 11.9 0.0 28 56 30 58 27 58 0.94 # 1274 # 1453 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.489 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/94a80197-17cb-47b5-95ee-95d9b89e29c6 # Target file: checkm_output/bins/pGCA_001747445.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001747445.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/94a80197-17cb-47b5-95ee-95d9b89e29c6 checkm_output/bins/pGCA_001747445.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:46:35 2020 # [ok]