# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_50 - 104 Methyltransf_28 PF02636.12 252 0.0034 11.7 0.0 1 1 8e-06 0.0035 11.7 0.0 80 127 37 84 4 102 0.68 # 31304 # 31615 # 1 # ID=1_50;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 1_219 - 261 Methyltransf_12 PF08242.7 99 0.00099 14.6 0.0 1 2 7.4e-05 0.032 9.7 0.0 1 36 103 143 103 159 0.80 # 189110 # 189892 # 1 # ID=1_219;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.559 1_219 - 261 Methyltransf_12 PF08242.7 99 0.00099 14.6 0.0 2 2 0.014 6.1 2.4 0.0 50 99 177 230 168 230 0.77 # 189110 # 189892 # 1 # ID=1_219;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.559 1_186 - 590 cobW PF02492.14 178 0.0025 12.2 0.6 1 1 5.1e-05 0.022 9.1 0.2 3 21 296 314 294 392 0.83 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_411 - 90 Seryl_tRNA_N PF02403.17 108 0.0018 13.2 1.8 1 1 5e-06 0.0022 13.0 1.8 33 63 2 32 1 68 0.90 # 307176 # 307445 # -1 # ID=1_411;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_212 - 318 MipZ PF09140.6 261 1.5e-11 38.8 0.1 1 1 4.5e-13 1.9e-10 35.2 0.1 2 142 33 194 32 214 0.72 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_212 - 318 YhjQ PF06564.7 244 8.9e-08 26.7 0.0 1 1 3.3e-10 1.4e-07 26.0 0.0 3 151 33 183 31 200 0.82 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_251 - 179 SSB PF00436.20 104 6.2e-22 72.4 0.0 1 1 2e-24 8.7e-22 72.0 0.0 3 97 7 98 5 101 0.92 # 215882 # 216418 # -1 # ID=1_251;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.600 1_219 - 261 Methyltransf_18 PF12847.2 112 5.2e-08 28.5 0.0 1 1 5.5e-10 1.2e-07 27.3 0.0 2 110 99 233 98 235 0.71 # 189110 # 189892 # 1 # ID=1_219;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.559 1_264 - 544 Methyltransf_18 PF12847.2 112 9.4e-05 18.0 0.0 1 1 1.5e-06 0.00033 16.2 0.0 34 109 429 500 396 503 0.87 # 226753 # 228384 # -1 # ID=1_264;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_160 - 1106 UvrD_C_2 PF13538.1 104 1.1e-09 33.4 0.1 1 2 4.2e-08 9e-06 20.8 0.0 49 80 743 774 703 785 0.71 # 122683 # 126000 # -1 # ID=1_160;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_160 - 1106 UvrD_C_2 PF13538.1 104 1.1e-09 33.4 0.1 2 2 0.00013 0.027 9.6 0.1 82 103 822 843 814 844 0.81 # 122683 # 126000 # -1 # ID=1_160;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_144 - 802 UvrD_C_2 PF13538.1 104 0.001 14.2 0.8 1 1 3.8e-05 0.0083 11.3 0.8 47 103 688 771 657 772 0.69 # 107635 # 110040 # -1 # ID=1_144;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.576 1_76 - 602 DUF87 PF01935.12 229 2.7e-07 25.6 0.0 1 1 5.8e-09 8.3e-07 24.0 0.0 19 57 136 173 130 203 0.91 # 54082 # 55887 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_66 - 963 DUF87 PF01935.12 229 1e-06 23.7 0.0 1 1 1.6e-08 2.4e-06 22.5 0.0 11 60 524 575 516 660 0.82 # 45790 # 48678 # -1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 1_194 - 451 DUF87 PF01935.12 229 1.5e-05 19.9 0.3 1 1 3.7e-07 5.3e-05 18.1 0.3 29 68 37 75 35 323 0.92 # 163825 # 165177 # -1 # ID=1_194;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_328 - 391 AAA_22 PF13401.1 131 1.4e-05 20.3 0.0 1 1 5.2e-07 4.5e-05 18.6 0.0 12 123 38 188 27 196 0.60 # 260433 # 261605 # -1 # ID=1_328;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_140 - 348 AAA_22 PF13401.1 131 0.00017 16.7 0.0 1 1 3.3e-06 0.00029 16.0 0.0 5 100 60 150 57 193 0.86 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_186 - 590 AAA_22 PF13401.1 131 0.00041 15.5 0.0 1 1 1.5e-05 0.0013 13.8 0.0 5 42 294 332 290 455 0.76 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_194 - 451 AAA_22 PF13401.1 131 0.00049 15.2 0.0 1 1 2.5e-05 0.0021 13.2 0.0 7 31 34 58 33 94 0.76 # 163825 # 165177 # -1 # ID=1_194;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_205 - 371 AAA_22 PF13401.1 131 0.0024 13.0 0.0 1 1 0.00016 0.014 10.5 0.0 7 49 67 101 62 164 0.61 # 173577 # 174689 # -1 # ID=1_205;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_155 - 139 Ribosomal_S10 PF00338.17 97 1.4e-09 32.7 0.0 1 1 4.4e-12 1.9e-09 32.3 0.0 2 96 29 126 28 127 0.87 # 119710 # 120126 # 1 # ID=1_155;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.540 1_258 - 502 DNA_methylase PF00145.12 335 9.3e-20 65.9 0.0 1 1 5.1e-21 2.2e-18 61.4 0.0 3 195 133 336 131 452 0.72 # 219937 # 221442 # -1 # ID=1_258;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_212 - 318 SRP54 PF00448.17 196 0.0017 12.8 0.0 1 2 0.00024 0.11 6.9 0.0 11 38 42 69 32 73 0.90 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_212 - 318 SRP54 PF00448.17 196 0.0017 12.8 0.0 2 2 0.0032 1.4 3.3 0.0 67 91 134 157 107 159 0.73 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_218 - 663 NAD_binding_7 PF13241.1 103 0.0021 13.3 1.3 1 1 2.1e-05 0.0089 11.3 1.3 40 95 483 545 449 550 0.74 # 187113 # 189101 # 1 # ID=1_218;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_186 - 590 AAA_17 PF13207.1 121 0.0073 12.1 1.3 1 1 6e-05 0.026 10.3 0.3 2 15 296 309 295 312 0.90 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_205 - 371 Miro PF08477.8 119 0.0012 14.4 0.0 1 1 5e-06 0.0022 13.5 0.0 5 25 70 90 66 121 0.77 # 173577 # 174689 # -1 # ID=1_205;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_140 - 348 MobB PF03205.9 140 1.6e-05 19.6 0.0 1 1 1.4e-07 3.1e-05 18.7 0.0 2 45 61 102 60 148 0.75 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_212 - 318 MobB PF03205.9 140 0.0021 12.8 0.0 1 1 2e-05 0.0043 11.7 0.0 10 45 42 75 32 76 0.83 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_212 - 318 ArsA_ATPase PF02374.10 305 1.9e-07 25.4 0.1 1 2 2.7e-09 1.2e-06 22.8 0.0 8 47 39 78 31 97 0.83 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_212 - 318 ArsA_ATPase PF02374.10 305 1.9e-07 25.4 0.1 2 2 0.044 19 -0.9 0.0 124 136 147 159 131 162 0.80 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_362 - 719 PhoH PF02562.11 205 0.0017 12.5 0.5 1 1 1.2e-05 0.005 11.0 0.5 12 48 116 152 113 182 0.83 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_186 - 590 T2SE PF00437.15 272 1.1e-53 176.9 0.4 1 1 7.6e-56 1.6e-53 176.3 0.4 10 270 165 430 157 432 0.91 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_164 - 343 T2SE PF00437.15 272 1.4e-28 94.5 0.1 1 1 1.2e-30 2.7e-28 93.6 0.1 128 253 124 249 109 265 0.89 # 130317 # 131345 # -1 # ID=1_164;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.582 1_328 - 391 AAA-ATPase_like PF09820.4 284 0.003 11.7 0.0 1 2 0.0017 0.74 3.8 0.0 29 48 28 47 24 51 0.83 # 260433 # 261605 # -1 # ID=1_328;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_328 - 391 AAA-ATPase_like PF09820.4 284 0.003 11.7 0.0 2 2 0.00049 0.21 5.6 0.0 122 159 113 156 66 190 0.72 # 260433 # 261605 # -1 # ID=1_328;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_219 - 261 CheR PF01739.13 196 6e-30 98.9 0.0 1 1 1.9e-32 8.4e-30 98.5 0.0 2 190 77 249 76 255 0.85 # 189110 # 189892 # 1 # ID=1_219;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.559 1_15 - 47 RNA_pol_Rpb2_45 PF10385.4 66 0.00026 15.8 0.1 1 1 6.7e-07 0.00029 15.6 0.1 11 37 12 38 5 40 0.88 # 10125 # 10265 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.631 1_212 - 318 Fer4_NifH PF00142.13 273 1.4e-06 22.6 0.0 1 2 2.3e-07 0.0001 16.5 0.0 7 51 39 83 32 94 0.84 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_212 - 318 Fer4_NifH PF00142.13 273 1.4e-06 22.6 0.0 2 2 0.0019 0.84 3.7 0.0 196 260 183 248 176 259 0.64 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_328 - 391 Arch_ATPase PF01637.13 234 4.7e-06 21.4 0.0 1 1 4e-08 8.7e-06 20.5 0.0 24 232 34 258 28 260 0.70 # 260433 # 261605 # -1 # ID=1_328;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_140 - 348 Arch_ATPase PF01637.13 234 1e-05 20.3 0.0 1 1 7.9e-08 1.7e-05 19.6 0.0 21 59 60 98 56 156 0.90 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_328 - 391 AAA_16 PF13191.1 185 1.2e-05 20.4 0.8 1 2 1e-06 0.00011 17.2 0.2 3 166 8 157 6 186 0.61 # 260433 # 261605 # -1 # ID=1_328;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_328 - 391 AAA_16 PF13191.1 185 1.2e-05 20.4 0.8 2 2 0.081 8.7 1.2 0.0 58 93 310 345 275 388 0.55 # 260433 # 261605 # -1 # ID=1_328;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_140 - 348 AAA_16 PF13191.1 185 0.00032 15.7 0.1 1 1 5.6e-06 0.0006 14.8 0.1 23 156 58 192 46 196 0.60 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_205 - 371 AAA_16 PF13191.1 185 0.001 14.0 0.0 1 1 2e-05 0.0022 13.0 0.0 20 48 60 88 52 95 0.84 # 173577 # 174689 # -1 # ID=1_205;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_186 - 590 AAA_16 PF13191.1 185 0.0011 13.9 0.0 1 1 6.2e-05 0.0067 11.4 0.0 22 91 291 374 282 449 0.67 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_186 - 590 AAA_23 PF13476.1 202 0.00024 16.4 0.0 1 1 1.3e-06 0.00055 15.3 0.0 17 37 288 311 269 314 0.83 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_342 - 121 SecA_DEAD PF07517.9 266 0.00082 13.7 0.2 1 1 2.5e-06 0.0011 13.3 0.2 13 107 4 104 2 109 0.80 # 269713 # 270075 # -1 # ID=1_342;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.587 1_212 - 318 CbiA PF01656.18 195 1.2e-29 98.1 0.0 1 1 6.7e-32 1.5e-29 97.8 0.0 1 191 34 249 34 253 0.79 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_140 - 348 CbiA PF01656.18 195 0.00087 13.7 0.3 1 1 9.6e-06 0.0021 12.5 0.3 10 106 70 149 65 178 0.75 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_140 - 348 KaiC PF06745.8 227 3.8e-11 37.5 0.6 1 1 4.8e-12 2.1e-09 31.8 0.6 1 163 40 206 40 268 0.66 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_140 - 348 AAA_14 PF13173.1 128 0.00057 14.8 0.0 1 2 0.0042 0.61 5.0 0.0 85 117 31 64 22 65 0.84 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_140 - 348 AAA_14 PF13173.1 128 0.00057 14.8 0.0 2 2 6.7e-05 0.0097 10.8 0.0 2 27 59 84 58 151 0.78 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_328 - 391 AAA_14 PF13173.1 128 0.0012 13.8 0.0 1 2 0.0053 0.76 4.7 0.0 10 21 38 49 32 97 0.78 # 260433 # 261605 # -1 # ID=1_328;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_328 - 391 AAA_14 PF13173.1 128 0.0012 13.8 0.0 2 2 0.001 0.14 7.0 0.0 58 104 137 196 94 223 0.74 # 260433 # 261605 # -1 # ID=1_328;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_186 - 590 AAA_14 PF13173.1 128 0.0039 12.1 0.0 1 1 0.00011 0.016 10.1 0.0 4 33 295 325 292 391 0.65 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_141 - 236 TIGR00084 TIGR00084 192 4.2e-05 17.8 0.0 1 1 1.3e-07 5.6e-05 17.4 0.0 76 136 163 220 114 234 0.83 # 104772 # 105479 # 1 # ID=1_141;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_164 - 343 AAA_29 PF13555.1 62 0.00022 15.7 0.1 1 1 2.4e-06 0.00052 14.5 0.1 23 46 125 147 113 157 0.79 # 130317 # 131345 # -1 # ID=1_164;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.582 1_186 - 590 AAA_29 PF13555.1 62 0.00037 15.0 0.0 1 1 4.8e-06 0.001 13.6 0.0 23 48 294 318 281 328 0.76 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_205 - 371 AAA PF00004.24 132 5.8e-06 21.5 0.0 1 1 5e-08 1.1e-05 20.7 0.0 1 74 67 146 67 161 0.80 # 173577 # 174689 # -1 # ID=1_205;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_140 - 348 AAA PF00004.24 132 6.4e-06 21.4 0.0 1 1 5.7e-08 1.2e-05 20.5 0.0 3 106 64 190 62 199 0.71 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_140 - 348 TK PF00265.13 176 0.00025 15.6 0.0 1 1 1e-06 0.00045 14.8 0.0 6 85 64 146 59 158 0.74 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_160 - 1106 UvrD_C PF13361.1 351 2.6e-26 87.8 0.0 1 1 8e-28 1.7e-25 85.1 0.0 2 351 490 848 489 848 0.82 # 122683 # 126000 # -1 # ID=1_160;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_144 - 802 UvrD_C PF13361.1 351 0.001 13.6 0.0 1 2 0.015 3.3 2.0 0.0 3 21 599 617 598 640 0.87 # 107635 # 110040 # -1 # ID=1_144;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.576 1_144 - 802 UvrD_C PF13361.1 351 0.001 13.6 0.0 2 2 9.4e-05 0.02 9.3 0.0 283 346 692 771 664 776 0.70 # 107635 # 110040 # -1 # ID=1_144;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.576 1_282 - 373 PAPS_reduct PF01507.14 174 5.7e-09 31.0 0.4 1 1 8.4e-11 1.8e-08 29.3 0.1 61 171 159 279 148 282 0.80 # 238393 # 239511 # -1 # ID=1_282;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608 1_7 - 737 PAPS_reduct PF01507.14 174 6.4e-09 30.8 0.0 1 1 6.7e-11 1.5e-08 29.7 0.0 3 157 54 251 52 298 0.80 # 3110 # 5320 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.601 1_219 - 261 NNMT_PNMT_TEMT PF01234.12 256 0.0043 11.0 0.0 1 2 0.016 6.9 0.5 0.0 159 191 15 47 3 59 0.84 # 189110 # 189892 # 1 # ID=1_219;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.559 1_219 - 261 NNMT_PNMT_TEMT PF01234.12 256 0.0043 11.0 0.0 2 2 7.9e-05 0.034 8.0 0.0 180 217 215 252 199 255 0.90 # 189110 # 189892 # 1 # ID=1_219;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.559 1_342 - 121 DUF258 PF03193.11 161 0.00051 14.2 0.2 1 1 1.7e-06 0.00074 13.7 0.2 53 106 53 106 2 114 0.71 # 269713 # 270075 # -1 # ID=1_342;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.587 1_76 - 602 TraG-D_C PF12696.2 128 6.1e-09 30.8 0.0 1 1 2.5e-11 1.1e-08 30.0 0.0 5 127 407 537 404 538 0.78 # 54082 # 55887 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_7 - 737 Asn_synthase PF00733.16 255 0.0023 12.4 0.7 1 1 1.2e-05 0.0052 11.2 0.0 7 37 40 70 37 112 0.82 # 3110 # 5320 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.601 1_212 - 318 AAA_31 PF13614.1 157 1e-13 46.5 0.0 1 1 4.1e-16 1.8e-13 45.7 0.0 1 151 32 182 32 188 0.79 # 180996 # 181949 # -1 # ID=1_212;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_186 - 590 AAA_33 PF13671.1 143 0.00031 15.6 0.1 1 1 3.6e-06 0.0015 13.4 0.0 1 82 295 374 295 390 0.58 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_264 - 544 Methyltransf_26 PF13659.1 117 4.2e-09 31.4 0.4 1 1 8.1e-11 1.8e-08 29.4 0.0 2 117 409 504 408 504 0.87 # 226753 # 228384 # -1 # ID=1_264;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_136 - 567 Methyltransf_26 PF13659.1 117 6.9e-08 27.5 0.1 1 1 9e-10 1.9e-07 26.1 0.1 7 116 419 507 414 508 0.83 # 99597 # 101297 # -1 # ID=1_136;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 1_362 - 719 AAA_30 PF13604.1 196 1.7e-05 19.4 2.7 1 2 6e-06 0.00065 14.3 0.5 16 81 121 186 114 230 0.83 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_362 - 719 AAA_30 PF13604.1 196 1.7e-05 19.4 2.7 2 2 0.0079 0.85 4.1 0.0 11 49 340 378 330 392 0.80 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_160 - 1106 AAA_30 PF13604.1 196 0.00037 15.1 0.3 1 2 5e-05 0.0054 11.3 0.1 10 65 31 89 28 110 0.75 # 122683 # 126000 # -1 # ID=1_160;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_160 - 1106 AAA_30 PF13604.1 196 0.00037 15.1 0.3 2 2 0.098 11 0.5 0.0 97 148 420 475 396 481 0.68 # 122683 # 126000 # -1 # ID=1_160;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_144 - 802 AAA_30 PF13604.1 196 0.0037 11.8 0.0 1 1 0.0001 0.011 10.3 0.0 12 36 124 147 117 154 0.70 # 107635 # 110040 # -1 # ID=1_144;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.576 1_77 - 723 AAA_30 PF13604.1 196 0.004 11.7 0.0 1 1 0.00021 0.023 9.2 0.0 96 151 426 480 361 522 0.81 # 55884 # 58052 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.589 1_66 - 963 FtsK_SpoIIIE PF01580.13 205 8.5e-07 23.6 0.1 1 1 1.2e-08 2.7e-06 22.0 0.0 35 69 535 569 516 589 0.77 # 45790 # 48678 # -1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 1_194 - 451 FtsK_SpoIIIE PF01580.13 205 2.4e-06 22.1 0.0 1 1 4.9e-08 1.1e-05 20.0 0.0 39 80 30 69 10 80 0.81 # 163825 # 165177 # -1 # ID=1_194;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_264 - 544 MTS PF05175.9 170 1.2e-06 23.0 0.0 1 1 5.8e-09 2.5e-06 21.9 0.0 66 146 431 508 423 526 0.77 # 226753 # 228384 # -1 # ID=1_264;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_140 - 348 AAA_35 PF14516.1 331 7.6e-06 19.7 0.0 1 1 3e-08 1.3e-05 18.9 0.0 30 70 58 98 56 108 0.92 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_140 - 348 RecA PF00154.16 323 7.9e-163 536.0 0.6 1 1 4.5e-165 9.7e-163 535.7 0.6 1 320 8 326 8 328 0.99 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_186 - 590 RecA PF00154.16 323 0.00043 14.3 0.0 1 1 3.7e-06 0.0008 13.5 0.0 18 94 258 334 249 349 0.86 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_164 - 343 ABC_tran PF00005.22 137 0.00083 14.7 0.0 1 1 3.3e-06 0.0014 13.9 0.0 15 80 128 204 121 263 0.71 # 130317 # 131345 # -1 # ID=1_164;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.582 1_160 - 1106 AAA_19 PF13245.1 76 3.5e-11 37.7 1.5 1 1 1.7e-12 1.5e-10 35.7 0.8 6 63 33 95 30 108 0.79 # 122683 # 126000 # -1 # ID=1_160;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_76 - 602 AAA_19 PF13245.1 76 0.00053 14.7 0.1 1 1 1.3e-05 0.0011 13.6 0.1 13 48 143 174 134 181 0.80 # 54082 # 55887 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_186 - 590 AAA_19 PF13245.1 76 0.0011 13.7 0.2 1 1 8.8e-05 0.0076 11.0 0.1 9 28 292 310 285 315 0.83 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_194 - 451 AAA_19 PF13245.1 76 0.0031 12.3 0.0 1 1 9.8e-05 0.0085 10.9 0.0 17 37 38 58 32 74 0.84 # 163825 # 165177 # -1 # ID=1_194;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_362 - 719 AAA_19 PF13245.1 76 0.013 10.2 3.0 1 2 0.0015 0.13 7.1 0.9 6 50 119 159 115 163 0.81 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_362 - 719 AAA_19 PF13245.1 76 0.013 10.2 3.0 2 2 0.085 7.4 1.4 0.0 16 36 353 378 342 393 0.74 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_66 - 963 AAA_10 PF12846.2 304 2.8e-52 173.0 0.0 1 1 4.2e-54 4.5e-52 172.3 0.0 2 303 539 863 538 864 0.91 # 45790 # 48678 # -1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 1_194 - 451 AAA_10 PF12846.2 304 1.6e-25 85.1 0.1 1 1 8e-27 8.6e-25 82.7 0.1 1 303 31 421 31 422 0.75 # 163825 # 165177 # -1 # ID=1_194;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_76 - 602 AAA_10 PF12846.2 304 6.4e-10 33.9 0.0 1 1 8.9e-12 9.7e-10 33.3 0.0 2 270 141 447 140 480 0.78 # 54082 # 55887 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_328 - 391 AAA_10 PF12846.2 304 0.0022 12.4 0.0 1 2 0.0094 1 3.6 0.0 3 36 32 66 30 72 0.88 # 260433 # 261605 # -1 # ID=1_328;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_328 - 391 AAA_10 PF12846.2 304 0.0022 12.4 0.0 2 2 0.0022 0.23 5.7 0.0 220 244 140 164 124 168 0.83 # 260433 # 261605 # -1 # ID=1_328;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.606 1_214 - 307 RNA_pol_Rpb2_3 PF04565.11 68 0.004 11.9 0.0 1 2 0.019 8.1 1.3 0.0 21 37 50 67 44 70 0.83 # 184252 # 185172 # -1 # ID=1_214;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.579 1_214 - 307 RNA_pol_Rpb2_3 PF04565.11 68 0.004 11.9 0.0 2 2 0.00019 0.084 7.7 0.0 10 58 234 285 231 289 0.78 # 184252 # 185172 # -1 # ID=1_214;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.579 1_362 - 719 ResIII PF04851.10 184 1.1e-05 20.3 0.0 1 2 1.2e-05 0.0017 13.2 0.0 23 73 121 173 97 192 0.76 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_362 - 719 ResIII PF04851.10 184 1.1e-05 20.3 0.0 2 2 0.005 0.72 4.6 0.0 137 158 302 331 263 342 0.66 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_76 - 602 ResIII PF04851.10 184 0.00067 14.5 0.0 1 1 8.2e-06 0.0012 13.7 0.0 26 58 141 175 114 270 0.81 # 54082 # 55887 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_194 - 451 ResIII PF04851.10 184 0.00083 14.2 0.0 1 1 2e-05 0.0029 12.4 0.0 26 57 32 65 18 71 0.85 # 163825 # 165177 # -1 # ID=1_194;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_219 - 261 Methyltransf_31 PF13847.1 152 2.2e-05 19.1 0.0 1 2 1.2e-05 0.0053 11.3 0.0 6 44 101 143 98 151 0.87 # 189110 # 189892 # 1 # ID=1_219;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.559 1_219 - 261 Methyltransf_31 PF13847.1 152 2.2e-05 19.1 0.0 2 2 0.0008 0.35 5.4 0.0 55 112 177 236 172 257 0.83 # 189110 # 189892 # 1 # ID=1_219;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.559 1_164 - 343 PPK2 PF03976.9 229 0.00046 14.5 0.0 1 1 1.8e-06 0.00078 13.7 0.0 33 70 126 163 120 177 0.92 # 130317 # 131345 # -1 # ID=1_164;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.582 1_178 - 125 TIGR00019 TIGR00019 361 0.0018 11.8 0.1 1 1 4.9e-06 0.0021 11.6 0.1 48 121 15 90 2 98 0.85 # 148098 # 148472 # -1 # ID=1_178;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_160 - 1106 Viral_helicase1 PF01443.13 234 0.0039 11.7 0.4 1 3 0.0034 1.5 3.2 0.0 7 48 48 88 44 101 0.67 # 122683 # 126000 # -1 # ID=1_160;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_160 - 1106 Viral_helicase1 PF01443.13 234 0.0039 11.7 0.4 2 3 0.016 7 1.0 0.0 184 206 751 773 716 784 0.81 # 122683 # 126000 # -1 # ID=1_160;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_160 - 1106 Viral_helicase1 PF01443.13 234 0.0039 11.7 0.4 3 3 0.0065 2.8 2.3 0.1 216 232 827 843 818 845 0.81 # 122683 # 126000 # -1 # ID=1_160;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_362 - 719 DEAD PF00270.24 169 1.5e-05 19.5 1.6 1 3 0.00041 0.06 7.8 0.2 7 53 116 160 111 186 0.81 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_362 - 719 DEAD PF00270.24 169 1.5e-05 19.5 1.6 2 3 0.0013 0.19 6.2 0.0 114 139 313 338 304 352 0.74 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_362 - 719 DEAD PF00270.24 169 1.5e-05 19.5 1.6 3 3 0.015 2.1 2.8 0.0 43 78 357 391 345 448 0.62 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_186 - 590 DEAD PF00270.24 169 0.00055 14.4 0.0 1 1 1e-05 0.0014 13.1 0.0 17 46 296 356 290 484 0.69 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_76 - 602 DEAD PF00270.24 169 0.0034 11.9 0.0 1 1 4.3e-05 0.0062 11.0 0.0 14 42 140 168 127 258 0.87 # 54082 # 55887 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_205 - 371 DUF815 PF05673.8 250 0.00063 13.7 0.0 1 1 2.5e-06 0.0011 12.9 0.0 51 77 62 88 53 95 0.83 # 173577 # 174689 # -1 # ID=1_205;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_194 - 451 DUF853 PF05872.7 504 3.4e-06 20.6 0.0 1 1 3.5e-08 7.6e-06 19.4 0.0 19 61 29 71 18 80 0.92 # 163825 # 165177 # -1 # ID=1_194;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_76 - 602 DUF853 PF05872.7 504 8.3e-05 16.0 0.0 1 1 6.4e-07 0.00014 15.3 0.0 12 113 131 228 121 276 0.81 # 54082 # 55887 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_264 - 544 Methyltransf_27 PF13708.1 194 5.5e-36 118.9 0.0 1 1 5.1e-38 1.1e-35 117.9 0.0 2 194 95 282 94 282 0.90 # 226753 # 228384 # -1 # ID=1_264;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_136 - 567 Methyltransf_27 PF13708.1 194 7.6e-27 89.0 0.0 1 1 4.9e-29 1.1e-26 88.6 0.0 4 194 92 282 89 282 0.93 # 99597 # 101297 # -1 # ID=1_136;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594 1_194 - 451 TrwB_AAD_bind PF10412.4 386 1e-09 32.4 0.1 1 2 2.5e-09 3.6e-07 24.1 0.0 19 61 35 78 29 89 0.87 # 163825 # 165177 # -1 # ID=1_194;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_194 - 451 TrwB_AAD_bind PF10412.4 386 1e-09 32.4 0.1 2 2 0.00073 0.11 6.1 0.0 256 286 360 390 308 393 0.84 # 163825 # 165177 # -1 # ID=1_194;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_76 - 602 TrwB_AAD_bind PF10412.4 386 8.7e-09 29.4 0.5 1 3 1.7e-06 0.00024 14.8 0.1 10 50 135 175 129 191 0.87 # 54082 # 55887 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_76 - 602 TrwB_AAD_bind PF10412.4 386 8.7e-09 29.4 0.5 2 3 0.0021 0.3 4.6 0.0 96 134 227 265 219 298 0.70 # 54082 # 55887 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_76 - 602 TrwB_AAD_bind PF10412.4 386 8.7e-09 29.4 0.5 3 3 0.00049 0.071 6.6 0.0 248 373 407 544 381 556 0.82 # 54082 # 55887 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.568 1_66 - 963 TrwB_AAD_bind PF10412.4 386 6.3e-05 16.7 0.0 1 1 8e-07 0.00012 15.8 0.0 15 52 538 576 534 582 0.84 # 45790 # 48678 # -1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 1_141 - 236 TIGR00615 TIGR00615 196 0.00047 14.3 0.0 1 1 1.8e-06 0.00079 13.6 0.0 6 32 185 211 180 231 0.82 # 104772 # 105479 # 1 # ID=1_141;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_219 - 261 Methyltransf_23 PF13489.1 161 3.6e-07 25.0 0.0 1 1 1.2e-09 5.3e-07 24.5 0.0 8 113 85 232 76 250 0.76 # 189110 # 189892 # 1 # ID=1_219;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.559 1_205 - 371 RNA_helicase PF00910.17 107 0.0024 13.1 0.0 1 1 1.1e-05 0.0046 12.1 0.0 2 25 68 91 67 160 0.81 # 173577 # 174689 # -1 # ID=1_205;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_138 - 61 Terminase_GpA PF05876.7 557 0.0041 10.4 1.5 1 1 9.7e-06 0.0042 10.4 1.5 202 238 5 39 3 52 0.83 # 102706 # 102888 # -1 # ID=1_138;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 1_140 - 348 AAA_24 PF13479.1 213 0.0018 12.8 0.0 1 1 8.2e-06 0.0035 11.9 0.0 8 79 64 148 60 151 0.65 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_160 - 1106 UvrD-helicase PF00580.16 315 1.8e-32 107.8 0.0 1 1 1.4e-33 3e-31 103.8 0.0 14 310 40 475 30 480 0.71 # 122683 # 126000 # -1 # ID=1_160;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_144 - 802 UvrD-helicase PF00580.16 315 2.8e-08 28.3 0.0 1 2 2.5e-07 5.4e-05 17.5 0.0 2 54 118 170 117 198 0.84 # 107635 # 110040 # -1 # ID=1_144;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.576 1_144 - 802 UvrD-helicase PF00580.16 315 2.8e-08 28.3 0.0 2 2 0.00013 0.027 8.7 0.0 256 314 518 589 493 590 0.93 # 107635 # 110040 # -1 # ID=1_144;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.576 1_140 - 348 AAA_25 PF13481.1 194 9.8e-08 26.6 1.0 1 1 1.6e-08 2.2e-06 22.1 1.0 26 158 51 158 36 194 0.70 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_186 - 590 AAA_25 PF13481.1 194 0.0013 13.2 0.0 1 1 4.6e-05 0.0067 10.8 0.0 24 57 284 317 273 373 0.87 # 155217 # 156986 # -1 # ID=1_186;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_205 - 371 AAA_25 PF13481.1 194 0.0021 12.4 0.0 1 1 2.8e-05 0.0041 11.5 0.0 32 63 63 100 36 126 0.75 # 173577 # 174689 # -1 # ID=1_205;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_362 - 719 Helicase_C_2 PF13307.1 167 1.5e-07 26.5 0.1 1 2 0.047 20 0.0 0.0 122 145 365 388 347 393 0.88 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_362 - 719 Helicase_C_2 PF13307.1 167 1.5e-07 26.5 0.1 2 2 6.2e-09 2.7e-06 22.4 0.0 2 138 544 682 543 700 0.74 # 283413 # 285569 # 1 # ID=1_362;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.583 1_140 - 348 AAA_28 PF13521.1 163 0.0024 12.8 0.0 1 1 9e-06 0.0039 12.1 0.0 3 27 63 91 61 144 0.82 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_140 - 348 Rad51 PF08423.6 256 2.5e-10 34.6 0.0 1 1 3.3e-12 1.4e-09 32.2 0.0 12 221 32 226 20 233 0.80 # 103555 # 104598 # -1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_205 - 371 AAA_5 PF07728.9 139 7.2e-18 59.6 0.0 1 1 2.5e-20 1.1e-17 59.0 0.0 2 139 67 223 66 223 0.95 # 173577 # 174689 # -1 # ID=1_205;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3864b1b7-f665-4374-af07-f47c7df959b8 # Target file: checkm_output/bins/pGCA_001722005.2.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001722005.2.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3864b1b7-f665-4374-af07-f47c7df959b8 checkm_output/bins/pGCA_001722005.2.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:46:36 2020 # [ok]