# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 5_1 - 95 cobW PF02492.14 178 0.00024 12.9 0.6 1 1 4.6e-06 0.0003 12.5 0.6 4 26 35 57 33 92 0.77 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 IstB_IS21 PF01695.12 178 0.00011 14.0 0.1 1 1 1.6e-05 0.00051 11.8 0.0 46 70 270 294 254 313 0.84 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 IstB_IS21 PF01695.12 178 0.00026 12.7 0.0 1 1 8.1e-06 0.00026 12.7 0.0 40 71 24 55 2 89 0.76 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 NB-ARC PF00931.17 287 1e-05 16.8 0.1 1 1 5.6e-07 3.6e-05 15.0 0.1 22 46 274 299 258 424 0.69 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_12 - 198 NmrA PF05368.8 233 0.00016 13.2 0.4 1 1 4.3e-06 0.00028 12.5 0.4 1 40 152 193 152 196 0.85 # 6065 # 6658 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 4_6 - 426 AAA_22 PF13401.1 131 6.2e-09 28.4 1.5 1 1 7.5e-10 1.6e-08 27.1 0.0 5 120 272 407 266 417 0.78 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 AAA_22 PF13401.1 131 4.2e-05 16.0 0.0 1 1 2.6e-06 5.7e-05 15.6 0.0 7 30 34 57 30 92 0.77 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_6 - 231 AAA_22 PF13401.1 131 4.9e-05 15.8 1.7 1 1 1.3e-05 0.00027 13.4 1.7 9 121 38 191 30 202 0.65 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 5_1 - 95 SRP54 PF00448.17 196 7.1e-05 14.6 0.2 1 1 3.6e-06 0.00012 13.9 0.1 3 29 33 59 31 76 0.87 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_6 - 231 SRP54 PF00448.17 196 0.0002 13.1 0.1 1 1 1e-05 0.00033 12.4 0.1 5 87 37 119 33 142 0.73 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 6_2 - 87 AAA_15 PF13175.1 415 5.2e-07 21.2 0.4 1 1 3.7e-08 8.1e-07 20.6 0.4 371 411 3 45 1 46 0.93 # 1098 # 1358 # -1 # ID=6_2;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.299 5_6 - 231 AAA_15 PF13175.1 415 3.6e-06 18.5 0.1 1 2 0.034 0.75 1.0 11.7 22 113 25 131 2 144 0.48 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 5_6 - 231 AAA_15 PF13175.1 415 3.6e-06 18.5 0.1 2 2 1.7e-07 3.6e-06 18.5 0.1 371 411 153 195 138 196 0.91 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 5_1 - 95 AAA_15 PF13175.1 415 1.9e-05 16.1 0.5 1 1 9.3e-07 2e-05 16.0 0.5 13 43 16 68 4 92 0.61 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 1_1 - 136 AAA_17 PF13207.1 121 1.2e-06 21.7 0.8 1 1 9.9e-08 1.6e-06 21.3 0.8 23 111 24 120 18 129 0.83 # 3 # 410 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 5_2 - 225 AAA_17 PF13207.1 121 3.3e-06 20.2 1.2 1 1 3.5e-07 5.6e-06 19.5 1.2 23 113 24 122 21 206 0.85 # 759 # 1433 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 5_1 - 95 AAA_17 PF13207.1 121 1.8e-05 17.8 0.0 1 1 1.4e-06 2.3e-05 17.5 0.0 1 23 33 55 33 88 0.75 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 AAA_17 PF13207.1 121 3.8e-05 16.8 0.1 1 1 4e-05 0.00065 12.8 0.0 2 21 274 293 273 394 0.66 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_6 - 231 AAA_21 PF13304.1 303 5.2e-17 55.0 8.0 1 1 2.5e-15 4e-14 45.5 8.0 3 297 37 194 35 200 0.85 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 4_6 - 426 AAA_21 PF13304.1 303 5.5e-17 54.9 3.1 1 3 1.5e-07 2.4e-06 19.9 0.1 236 303 49 110 17 110 0.84 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 AAA_21 PF13304.1 303 5.5e-17 54.9 3.1 2 3 1.1e-07 1.8e-06 20.3 0.0 3 21 275 293 274 308 0.86 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 AAA_21 PF13304.1 303 5.5e-17 54.9 3.1 3 3 1.6e-05 0.00026 13.3 0.2 232 302 352 416 307 417 0.70 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 6_2 - 87 AAA_21 PF13304.1 303 1.1e-08 27.7 1.1 1 1 9e-10 1.5e-08 27.2 0.5 259 297 5 44 1 50 0.91 # 1098 # 1358 # -1 # ID=6_2;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.299 5_1 - 95 AAA_21 PF13304.1 303 1.2e-05 17.6 0.1 1 1 9.4e-07 1.5e-05 17.3 0.1 3 20 35 52 34 88 0.85 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_1 - 95 Miro PF08477.8 119 2.5e-07 23.6 0.0 1 1 9.5e-09 3.1e-07 23.3 0.0 1 49 33 80 33 93 0.79 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 Miro PF08477.8 119 0.00017 14.4 0.0 1 1 4.9e-05 0.0016 11.3 0.0 2 20 274 292 273 313 0.88 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 MobB PF03205.9 140 6.5e-05 15.0 0.0 1 1 2.6e-06 8.4e-05 14.6 0.0 3 30 34 61 33 80 0.86 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 MobB PF03205.9 140 0.00018 13.6 0.0 1 1 1.6e-05 0.00053 12.0 0.0 3 24 274 295 272 304 0.87 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_12 - 198 ADH_zinc_N PF00107.21 130 1.7e-08 26.4 0.4 1 1 1.5e-09 4.8e-08 24.9 0.2 1 35 160 195 160 197 0.97 # 6065 # 6658 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 1_13 - 121 ADH_zinc_N PF00107.21 130 0.00024 12.9 0.0 1 1 1.2e-05 0.00038 12.3 0.0 57 117 8 67 2 82 0.85 # 6671 # 7033 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.281 5_1 - 95 Arf PF00025.16 175 0.00034 12.2 0.0 1 1 5.5e-06 0.00036 12.1 0.0 15 47 32 66 19 86 0.76 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_1 - 95 Ras PF00071.17 162 2.1e-05 16.3 0.1 1 1 4.3e-07 2.8e-05 15.9 0.1 1 45 33 78 33 86 0.85 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 AFG1_ATPase PF03969.11 362 0.00049 11.2 0.0 1 2 0.071 4.6 -1.9 8.5 5 49 133 177 130 199 0.71 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 AFG1_ATPase PF03969.11 362 0.00049 11.2 0.0 2 2 7.6e-06 0.00049 11.2 0.0 47 88 255 297 210 352 0.79 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 T2SE PF00437.15 272 1.2e-05 16.6 0.1 1 1 1.8e-07 1.2e-05 16.6 0.1 130 174 33 74 10 93 0.80 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 SMC_N PF02463.14 220 6.2e-12 37.5 9.0 1 3 4.2e-06 0.00014 13.4 0.0 133 208 46 116 15 126 0.81 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 SMC_N PF02463.14 220 6.2e-12 37.5 9.0 2 3 9.1e-06 0.00029 12.4 0.0 24 46 272 293 253 315 0.82 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 SMC_N PF02463.14 220 6.2e-12 37.5 9.0 3 3 7.3e-07 2.4e-05 15.9 0.2 110 186 324 402 315 423 0.79 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_6 - 231 SMC_N PF02463.14 220 0.00067 11.2 0.2 1 2 0.0052 0.17 3.3 0.1 27 42 36 51 8 77 0.82 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 5_6 - 231 SMC_N PF02463.14 220 0.00067 11.2 0.2 2 2 0.0008 0.026 6.0 0.0 161 207 156 204 129 213 0.75 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 4_6 - 426 Arch_ATPase PF01637.13 234 2e-05 16.6 3.0 1 2 0.017 1.1 1.1 1.5 51 101 133 183 107 224 0.51 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 Arch_ATPase PF01637.13 234 2e-05 16.6 3.0 2 2 2.2e-06 0.00014 13.9 0.0 25 95 276 350 268 403 0.70 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 AAA_16 PF13191.1 185 3.1e-07 22.8 2.1 1 2 0.035 1.1 1.4 1.2 48 130 119 196 106 232 0.54 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 AAA_16 PF13191.1 185 3.1e-07 22.8 2.1 2 2 6.7e-08 2.2e-06 20.1 0.0 12 51 260 298 257 373 0.74 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 AAA_16 PF13191.1 185 0.00021 13.6 0.0 1 1 6.6e-06 0.00021 13.6 0.0 27 60 34 70 18 94 0.71 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 AAA_23 PF13476.1 202 1.4e-05 17.8 0.1 1 1 6.2e-07 1.4e-05 17.8 0.1 22 40 274 292 259 297 0.87 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 AAA_23 PF13476.1 202 0.00022 13.9 2.9 1 1 1.1e-05 0.00024 13.8 2.8 22 40 34 52 2 83 0.89 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_6 - 231 AAA_23 PF13476.1 202 0.00064 12.4 7.4 1 1 6.4e-05 0.0014 11.3 7.4 15 132 28 152 8 229 0.53 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 5_1 - 95 AAA_18 PF13238.1 129 5.5e-05 15.8 0.1 1 1 2.2e-06 7e-05 15.5 0.1 1 42 34 81 34 93 0.77 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 AAA_18 PF13238.1 129 0.00031 13.4 1.3 1 1 2.5e-05 0.0008 12.0 0.0 1 23 274 314 274 416 0.75 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 2_11 - 257 adh_short PF00106.20 167 1.5e-09 30.3 0.0 1 1 2.8e-11 1.8e-09 30.0 0.0 10 163 18 175 7 179 0.78 # 6230 # 7000 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 5_1 - 95 AAA_13 PF13166.1 712 3.8e-05 14.5 0.1 1 1 5.8e-07 3.8e-05 14.5 0.1 14 42 30 57 9 84 0.76 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 AAA_14 PF13173.1 128 7.3e-06 18.2 4.4 1 1 5.4e-07 1.8e-05 17.0 0.1 2 57 271 329 270 423 0.67 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 AAA_14 PF13173.1 128 7.5e-05 15.0 0.0 1 1 2.9e-06 9.4e-05 14.6 0.0 4 28 33 64 30 94 0.65 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 AAA_29 PF13555.1 62 6.5e-07 21.2 0.0 1 1 4.8e-08 1.6e-06 20.0 0.0 17 43 266 291 259 294 0.84 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 AAA_29 PF13555.1 62 2.9e-05 15.9 0.0 1 1 1.7e-06 5.6e-05 15.0 0.0 25 41 33 49 19 55 0.82 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_1 - 95 AAA PF00004.24 132 8.4e-06 18.3 0.0 1 1 3.2e-07 1e-05 18.1 0.0 2 29 35 62 34 91 0.69 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 AAA PF00004.24 132 0.00023 13.7 0.2 1 1 2.9e-05 0.00094 11.7 0.0 2 23 275 296 274 344 0.79 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 2_11 - 257 KR PF08659.5 181 1.7e-06 20.1 0.0 1 1 4.1e-08 2.7e-06 19.5 0.0 12 90 20 95 8 112 0.82 # 6230 # 7000 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 5_6 - 231 MMR_HSR1 PF01926.18 116 1.6e-05 17.2 1.8 1 1 3.1e-06 6.7e-05 15.2 1.8 3 68 37 106 35 229 0.74 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 5_1 - 95 MMR_HSR1 PF01926.18 116 2.9e-05 16.3 0.1 1 1 1.8e-06 3.8e-05 16.0 0.1 1 39 33 68 33 87 0.71 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 MMR_HSR1 PF01926.18 116 0.00022 13.5 2.9 1 2 0.044 0.96 1.8 0.0 44 92 58 108 29 157 0.67 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 MMR_HSR1 PF01926.18 116 0.00022 13.5 2.9 2 2 0.0001 0.0022 10.3 0.0 2 21 274 293 273 304 0.88 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 DUF258 PF03193.11 161 7.2e-06 17.6 0.0 1 1 3.5e-07 7.6e-06 17.5 0.0 36 67 32 63 1 77 0.75 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_6 - 231 DUF258 PF03193.11 161 2.3e-05 15.9 0.3 1 1 1.9e-06 4.1e-05 15.1 0.3 15 100 12 94 1 113 0.77 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 4_6 - 426 DUF258 PF03193.11 161 2.8e-05 15.6 0.0 1 1 2.6e-06 5.7e-05 14.6 0.0 20 58 255 294 237 384 0.85 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 AAA_33 PF13671.1 143 9.2e-05 14.7 0.0 1 1 1.7e-06 0.00011 14.4 0.0 3 38 35 75 34 90 0.77 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 2_11 - 257 2-Hacid_dh_C PF02826.14 178 0.00055 11.4 0.1 1 2 2.5e-05 0.0017 9.8 0.0 33 78 3 51 1 67 0.79 # 6230 # 7000 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 2_11 - 257 2-Hacid_dh_C PF02826.14 178 0.00055 11.4 0.1 2 2 0.061 4 -1.2 0.0 27 51 60 84 51 87 0.48 # 6230 # 7000 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 5_1 - 95 AAA_30 PF13604.1 196 0.00015 13.7 0.0 1 1 2.4e-06 0.00015 13.6 0.0 22 49 35 62 24 91 0.82 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_1 - 95 Dynamin_N PF00350.18 168 0.00032 12.8 0.0 1 1 6.5e-06 0.00042 12.4 0.0 1 29 34 61 34 89 0.83 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_6 - 231 ABC_tran PF00005.22 137 5.2e-35 113.0 0.9 1 1 5e-36 8.1e-35 112.4 0.3 1 137 23 164 23 164 0.95 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 4_6 - 426 ABC_tran PF00005.22 137 1.2e-31 102.2 6.4 1 3 9.8e-10 1.6e-08 27.3 0.0 104 137 44 78 5 78 0.79 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 ABC_tran PF00005.22 137 1.2e-31 102.2 6.4 2 3 0.007 0.11 5.1 2.3 38 92 121 218 108 255 0.68 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 ABC_tran PF00005.22 137 1.2e-31 102.2 6.4 3 3 2.1e-22 3.4e-21 68.3 0.1 1 137 261 385 261 385 0.75 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 ABC_tran PF00005.22 137 2.6e-12 39.5 0.1 1 1 1.9e-13 3e-12 39.3 0.1 8 45 28 65 21 90 0.82 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 6_2 - 87 ABC_tran PF00005.22 137 0.00045 12.8 0.3 1 2 0.00025 0.0041 9.7 0.1 124 137 1 14 1 14 0.92 # 1098 # 1358 # -1 # ID=6_2;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.299 6_2 - 87 ABC_tran PF00005.22 137 0.00045 12.8 0.3 2 2 0.083 1.4 1.6 0.0 61 96 24 60 19 83 0.58 # 1098 # 1358 # -1 # ID=6_2;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.299 5_1 - 95 ATP-synt_ab PF00006.20 215 0.00028 12.7 0.0 1 1 5e-06 0.00032 12.5 0.0 16 44 32 60 27 80 0.83 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_1 - 95 AAA_19 PF13245.1 76 1.8e-05 16.8 0.1 1 1 3.9e-07 2.6e-05 16.3 0.1 14 33 35 53 28 62 0.87 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 1_12 - 198 NAD_binding_10 PF13460.1 183 8.3e-05 14.9 0.6 1 1 2e-06 0.00013 14.3 0.6 1 36 152 188 152 195 0.92 # 6065 # 6658 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 2_11 - 257 adh_short_C2 PF13561.1 241 9.1e-79 256.9 0.0 1 1 1.6e-80 1e-78 256.7 0.0 1 241 13 253 13 253 0.98 # 6230 # 7000 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 4_6 - 426 SbcCD_C PF13558.1 90 0.00019 13.7 7.3 1 2 0.0037 0.24 3.7 0.1 30 77 47 81 35 93 0.62 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 SbcCD_C PF13558.1 90 0.00019 13.7 7.3 2 2 3.1e-05 0.002 10.4 0.1 23 84 347 395 314 401 0.71 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 DUF3584 PF12128.3 1201 0.0049 6.4 18.4 1 2 0.00054 0.035 3.6 14.0 350 531 131 222 102 263 0.49 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 DUF3584 PF12128.3 1201 0.0049 6.4 18.4 2 2 0.0002 0.013 5.0 0.1 21 35 275 289 269 291 0.86 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_6 - 231 PduV-EutP PF10662.4 143 4.3e-05 15.3 0.1 1 1 2.6e-06 8.5e-05 14.4 0.1 6 51 38 96 34 146 0.85 # 2862 # 3554 # 1 # ID=5_6;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 5_1 - 95 PduV-EutP PF10662.4 143 7.7e-05 14.5 0.1 1 1 2.9e-06 9.5e-05 14.2 0.1 2 25 32 55 31 78 0.88 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 1_12 - 198 Epimerase PF01370.16 236 0.00025 12.8 0.3 1 1 5.8e-06 0.00038 12.2 0.3 1 35 152 187 152 194 0.82 # 6065 # 6658 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 1_12 - 198 DapB_N PF01113.15 124 0.00042 12.5 1.4 1 2 0.022 1.4 1.2 0.0 92 103 121 132 115 145 0.84 # 6065 # 6658 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 1_12 - 198 DapB_N PF01113.15 124 0.00042 12.5 1.4 2 2 5.9e-05 0.0038 9.5 0.2 3 39 152 187 150 197 0.74 # 6065 # 6658 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.338 4_6 - 426 ArgK PF03308.11 267 0.0031 8.6 3.0 1 2 0.068 4.4 -1.8 0.8 181 217 162 198 142 232 0.46 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 ArgK PF03308.11 267 0.0031 8.6 3.0 2 2 2.6e-05 0.0017 9.4 0.1 5 52 251 294 247 299 0.84 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 Pox_A32 PF04665.7 241 0.00012 13.7 0.0 1 1 2.6e-06 0.00017 13.2 0.0 8 35 25 53 19 58 0.81 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 RNA_helicase PF00910.17 107 0.00023 13.7 0.5 1 2 0.047 3.1 0.4 0.6 18 98 108 188 105 194 0.63 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 RNA_helicase PF00910.17 107 0.00023 13.7 0.5 2 2 3.6e-05 0.0023 10.4 0.0 1 38 274 311 274 320 0.85 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 NACHT PF05729.7 166 4.1e-07 22.1 0.0 1 1 2.2e-08 7.1e-07 21.3 0.0 3 71 274 339 272 382 0.83 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 NACHT PF05729.7 166 5e-06 18.6 0.0 1 1 1.5e-07 5e-06 18.6 0.0 3 27 34 58 32 94 0.79 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 5_1 - 95 AAA_25 PF13481.1 194 0.00055 11.6 0.0 1 1 9.1e-06 0.00059 11.5 0.0 10 54 6 52 1 68 0.81 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 ABC_tran_2 PF12848.2 85 6.9e-10 31.0 27.5 1 2 4.9e-09 3.2e-07 22.5 18.7 4 65 121 182 119 185 0.97 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 ABC_tran_2 PF12848.2 85 6.9e-10 31.0 27.5 2 2 3.6e-06 0.00023 13.3 1.5 54 84 202 231 189 232 0.75 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_1 - 95 AAA_28 PF13521.1 163 1.2e-07 24.1 0.0 1 1 4.2e-09 1.4e-07 23.9 0.0 1 29 33 67 33 86 0.78 # 1 # 285 # -1 # ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.323 4_6 - 426 AAA_28 PF13521.1 163 1.3e-06 20.7 0.2 1 1 2.8e-07 9.1e-06 18.0 0.0 1 43 273 317 273 352 0.80 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 AAA_5 PF07728.9 139 7.6e-05 14.8 3.6 1 2 0.093 6 -1.1 2.8 28 49 131 155 127 227 0.70 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_6 - 426 AAA_5 PF07728.9 139 7.6e-05 14.8 3.6 2 2 2.2e-06 0.00014 13.9 0.0 2 43 274 319 273 401 0.85 # 3902 # 5179 # -1 # ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/651ca118-a1c8-4924-8b2e-444d70b2bffd # Target file: checkm_output/bins/pGCA_001717975.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001717975.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/651ca118-a1c8-4924-8b2e-444d70b2bffd checkm_output/bins/pGCA_001717975.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:46:26 2020 # [ok]