# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_34 - 489 Mg_chelatase PF01078.16 207 8.3e-05 14.3 0.0 1 2 0.00089 0.068 4.8 0.0 24 115 33 129 19 145 0.60 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Mg_chelatase PF01078.16 207 8.3e-05 14.3 0.0 2 2 0.00035 0.027 6.1 0.0 4 43 306 345 303 376 0.82 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 cobW PF02492.14 178 8.9e-07 21.0 0.2 1 2 0.00011 0.0043 9.0 0.1 4 26 35 56 33 77 0.79 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 cobW PF02492.14 178 8.9e-07 21.0 0.2 2 2 0.00012 0.0045 9.0 0.0 4 22 328 346 326 360 0.82 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 cobW PF02492.14 178 0.0001 14.3 0.4 1 1 5.2e-06 0.0002 13.4 0.1 2 42 31 72 30 107 0.87 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 ABC_ATPase PF09818.4 448 0.026 5.5 13.0 1 3 0.00097 0.074 4.0 0.2 249 266 36 53 32 57 0.82 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ABC_ATPase PF09818.4 448 0.026 5.5 13.0 2 3 0.043 3.2 -1.4 0.0 319 349 99 129 96 132 0.89 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ABC_ATPase PF09818.4 448 0.026 5.5 13.0 3 3 0.00013 0.0096 7.0 0.1 242 265 321 345 315 350 0.82 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 FeoB_N PF02421.13 156 6.5e-06 18.0 0.5 1 2 8.7e-05 0.0066 8.2 0.1 2 23 33 54 32 60 0.90 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 FeoB_N PF02421.13 156 6.5e-06 18.0 0.5 2 2 0.00014 0.011 7.6 0.0 2 21 326 345 325 357 0.89 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 IstB_IS21 PF01695.12 178 2e-07 23.1 0.1 1 2 0.00011 0.0083 8.0 0.0 43 70 27 54 4 91 0.81 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 IstB_IS21 PF01695.12 178 2e-07 23.1 0.1 2 2 9.5e-06 0.00072 11.5 0.0 46 70 323 347 307 366 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_3 - 300 MipZ PF09140.6 261 8.7e-07 20.7 0.3 1 2 5.3e-05 0.004 8.7 0.1 2 45 4 48 3 113 0.74 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_3 - 300 MipZ PF09140.6 261 8.7e-07 20.7 0.3 2 2 2.3e-05 0.0017 9.9 0.0 86 113 147 174 129 189 0.81 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_3 - 300 YhjQ PF06564.7 244 2.4e-11 35.9 0.0 1 2 7.9e-07 6e-05 15.0 0.0 3 41 4 43 1 55 0.87 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_3 - 300 YhjQ PF06564.7 244 2.4e-11 35.9 0.0 2 2 4.2e-08 3.2e-06 19.2 0.0 64 156 104 198 72 223 0.70 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 1_6 - 152 SSB PF00436.20 104 1.5e-18 59.1 0.8 1 1 3.5e-20 2.7e-18 58.4 0.1 1 103 2 94 2 95 0.95 # 3151 # 3606 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.268 2_34 - 489 NB-ARC PF00931.17 287 2e-09 29.2 0.2 1 2 1.9e-05 0.00072 10.9 0.0 18 109 30 128 19 149 0.67 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 NB-ARC PF00931.17 287 2e-09 29.2 0.2 2 2 9.3e-07 3.5e-05 15.2 0.1 22 47 327 353 311 486 0.55 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 NB-ARC PF00931.17 287 6.8e-05 14.3 0.3 1 1 3.8e-06 0.00014 13.2 0.3 17 52 27 63 12 67 0.81 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_13 - 324 NmrA PF05368.8 233 6.9e-06 17.9 0.7 1 1 2.1e-07 1.6e-05 16.8 0.7 1 52 152 205 152 275 0.90 # 8965 # 9936 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 2_34 - 489 Septin PF00735.13 281 4.8e-05 15.0 3.0 1 2 0.0001 0.0076 7.7 0.1 7 41 34 67 29 102 0.74 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Septin PF00735.13 281 4.8e-05 15.0 3.0 2 2 0.00025 0.019 6.4 0.0 6 27 326 347 323 365 0.89 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_22 PF13401.1 131 3.1e-13 42.5 2.7 1 2 2.8e-06 0.00011 14.9 0.0 7 108 34 144 32 158 0.64 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_22 PF13401.1 131 3.1e-13 42.5 2.7 2 2 7.1e-10 2.7e-08 26.6 0.0 5 120 325 460 319 470 0.77 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 1_12 - 665 AAA_22 PF13401.1 131 2.5e-05 16.9 0.4 1 2 2.1e-05 0.00078 12.1 0.1 5 36 258 286 253 381 0.73 # 10558 # 12552 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.320 1_12 - 665 AAA_22 PF13401.1 131 2.5e-05 16.9 0.4 2 2 0.033 1.2 1.8 0.0 89 101 528 542 499 558 0.78 # 10558 # 12552 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.320 2_34 - 489 ATP_bind_1 PF03029.12 238 0.00019 13.5 2.5 1 4 0.0026 0.2 3.6 0.1 2 21 37 56 36 65 0.83 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ATP_bind_1 PF03029.12 238 0.00019 13.5 2.5 2 4 0.03 2.3 0.2 0.1 63 119 248 305 192 315 0.76 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ATP_bind_1 PF03029.12 238 0.00019 13.5 2.5 3 4 0.00042 0.032 6.2 0.0 2 23 330 351 329 398 0.90 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ATP_bind_1 PF03029.12 238 0.00019 13.5 2.5 4 4 0.064 4.8 -0.9 0.0 134 169 432 467 415 483 0.81 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 SRP54 PF00448.17 196 4.2e-05 15.6 8.3 1 2 3.6e-05 0.0028 9.6 0.4 3 28 33 58 31 64 0.86 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 SRP54 PF00448.17 196 4.2e-05 15.6 8.3 2 2 2.6e-05 0.002 10.1 0.0 3 23 326 346 324 377 0.81 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 AAA_15 PF13175.1 415 1.6e-08 26.5 10.5 1 3 3.2e-07 2.4e-05 16.0 4.9 5 57 12 83 11 130 0.59 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_35 - 232 AAA_15 PF13175.1 415 1.6e-08 26.5 10.5 2 3 3.5e-06 0.00027 12.5 0.0 371 411 141 181 122 186 0.90 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_35 - 232 AAA_15 PF13175.1 415 1.6e-08 26.5 10.5 3 3 0.043 3.2 -0.9 0.5 64 133 190 227 183 231 0.46 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 AAA_17 PF13207.1 121 1.9e-09 31.0 1.2 1 2 1.4e-05 0.00036 13.9 1.2 1 23 33 55 33 273 0.81 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_17 PF13207.1 121 1.9e-09 31.0 1.2 2 2 4e-05 0.001 12.4 0.0 2 19 327 344 326 447 0.69 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 4_1 - 225 AAA_17 PF13207.1 121 3.6e-06 20.3 1.1 1 1 2.1e-07 5.2e-06 19.8 1.1 23 113 24 122 20 205 0.85 # 60 # 734 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 2_35 - 232 AAA_17 PF13207.1 121 0.00042 13.7 0.3 1 1 4.9e-05 0.0012 12.2 0.1 1 62 31 104 31 172 0.63 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_35 - 232 AAA_21 PF13304.1 303 3e-19 62.5 3.2 1 1 3.4e-19 1.3e-17 57.1 1.3 3 297 33 180 31 187 0.84 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 AAA_21 PF13304.1 303 3.3e-19 62.4 9.5 1 4 1.1e-05 0.0004 12.9 1.2 3 20 35 52 34 89 0.83 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_21 PF13304.1 303 3.3e-19 62.4 9.5 2 4 1.9e-07 7e-06 18.6 0.0 236 303 102 163 67 163 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_21 PF13304.1 303 3.3e-19 62.4 9.5 3 4 6.5e-08 2.5e-06 20.1 0.0 3 21 328 346 327 362 0.86 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_21 PF13304.1 303 3.3e-19 62.4 9.5 4 4 7.8e-06 0.0003 13.3 0.2 228 302 401 469 358 470 0.71 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Miro PF08477.8 119 3.2e-11 36.3 0.1 1 2 2.3e-08 1.8e-06 21.0 0.0 1 50 33 81 33 104 0.82 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Miro PF08477.8 119 3.2e-11 36.3 0.1 2 2 2.9e-05 0.0022 11.0 0.0 2 20 327 345 326 366 0.88 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 MobB PF03205.9 140 1.3e-07 24.0 1.3 1 2 3.2e-05 0.0024 10.1 0.3 3 25 34 56 33 64 0.87 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 MobB PF03205.9 140 1.3e-07 24.0 1.3 2 2 9.6e-06 0.00073 11.8 0.0 3 24 327 348 325 357 0.87 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_13 - 324 ADH_zinc_N PF00107.21 130 1.2e-16 52.9 0.0 1 1 3.7e-18 2.8e-16 51.8 0.0 1 117 160 270 160 285 0.90 # 8965 # 9936 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 2_3 - 300 ArsA_ATPase PF02374.10 305 1.3e-11 36.6 2.8 1 1 3.6e-12 2.8e-10 32.2 2.8 9 137 11 170 4 172 0.66 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_34 - 489 Arf PF00025.16 175 0.00035 12.4 1.8 1 2 0.00012 0.009 7.8 0.0 15 39 32 56 21 79 0.76 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Arf PF00025.16 175 0.00035 12.4 1.8 2 2 0.0045 0.34 2.6 0.0 16 35 326 345 314 372 0.80 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Ras PF00071.17 162 3e-05 16.0 2.7 1 2 5.4e-05 0.0041 9.0 0.0 1 44 33 77 33 86 0.75 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Ras PF00071.17 162 3e-05 16.0 2.7 2 2 0.00049 0.037 5.9 0.0 2 18 327 343 326 378 0.86 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AFG1_ATPase PF03969.11 362 4e-05 15.0 9.9 1 3 0.0012 0.088 4.0 0.0 67 135 36 128 29 143 0.68 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AFG1_ATPase PF03969.11 362 4e-05 15.0 9.9 2 3 0.065 4.9 -1.7 8.0 5 49 186 230 183 252 0.71 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AFG1_ATPase PF03969.11 362 4e-05 15.0 9.9 3 3 1e-05 0.00076 10.8 0.0 47 88 308 350 263 397 0.79 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 T2SE PF00437.15 272 2.3e-07 22.5 2.6 1 2 3.8e-06 0.00029 12.3 0.0 130 175 33 75 18 93 0.79 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 T2SE PF00437.15 272 2.3e-07 22.5 2.6 2 2 2.9e-05 0.0022 9.4 0.8 115 153 311 349 189 354 0.67 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_3 - 300 Methyltransf_24 PF13578.1 106 0.00031 14.1 0.0 1 1 0.00012 0.0091 9.4 0.0 4 80 13 170 11 177 0.55 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_35 - 232 Zeta_toxin PF06414.7 201 0.00031 12.4 0.0 1 1 6.2e-06 0.00047 11.8 0.0 14 45 27 60 15 81 0.78 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 SMC_N PF02463.14 220 1.1e-13 43.4 9.8 1 4 0.001 0.038 5.7 0.0 24 44 31 51 12 54 0.71 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 SMC_N PF02463.14 220 1.1e-13 43.4 9.8 2 4 4.2e-06 0.00016 13.4 0.0 133 208 99 169 60 179 0.80 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 SMC_N PF02463.14 220 1.1e-13 43.4 9.8 3 4 9.7e-06 0.00037 12.3 0.0 24 46 325 346 306 375 0.81 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 SMC_N PF02463.14 220 1.1e-13 43.4 9.8 4 4 8e-07 3e-05 15.8 0.1 110 186 377 455 366 480 0.79 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 SMC_N PF02463.14 220 6.6e-07 21.2 1.7 1 2 8.4e-06 0.00032 12.5 0.8 20 66 24 64 11 124 0.75 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_35 - 232 SMC_N PF02463.14 220 6.6e-07 21.2 1.7 2 2 0.00023 0.0086 7.8 0.0 151 199 133 182 127 202 0.77 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_3 - 300 VirC1 PF07015.6 231 1.9e-05 16.3 0.3 1 2 5.9e-05 0.0045 8.6 0.1 3 72 4 74 2 130 0.63 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_3 - 300 VirC1 PF07015.6 231 1.9e-05 16.3 0.3 2 2 0.00064 0.049 5.2 0.0 80 115 156 193 143 207 0.78 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_3 - 300 Fer4_NifH PF00142.13 273 1.5e-09 29.9 0.5 1 2 1.9e-10 1.4e-08 26.7 0.1 8 68 11 74 4 84 0.84 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_3 - 300 Fer4_NifH PF00142.13 273 1.5e-09 29.9 0.5 2 2 0.013 1 0.9 0.0 144 248 184 292 153 296 0.68 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_34 - 489 Arch_ATPase PF01637.13 234 1.2e-07 24.1 5.4 1 3 8e-05 0.0061 8.7 0.0 22 84 34 95 21 158 0.56 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Arch_ATPase PF01637.13 234 1.2e-07 24.1 5.4 2 3 0.019 1.4 1.0 1.7 53 83 188 236 160 277 0.50 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Arch_ATPase PF01637.13 234 1.2e-07 24.1 5.4 3 3 1.8e-06 0.00014 14.1 0.0 25 126 329 435 321 479 0.73 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_16 PF13191.1 185 2.3e-10 33.3 0.8 1 3 8.4e-05 0.0064 9.0 0.0 27 51 34 58 24 97 0.79 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_16 PF13191.1 185 2.3e-10 33.3 0.8 2 3 0.036 2.8 0.4 1.0 48 129 172 248 159 284 0.51 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_16 PF13191.1 185 2.3e-10 33.3 0.8 3 3 4.1e-08 3.1e-06 19.8 0.0 12 51 313 351 310 425 0.74 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_23 PF13476.1 202 4.8e-07 22.8 25.0 1 2 0.047 1.8 1.3 24.7 22 196 34 270 18 290 0.41 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_23 PF13476.1 202 4.8e-07 22.8 25.0 2 2 3e-07 1.1e-05 18.3 0.0 22 40 327 345 310 447 0.88 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 AAA_23 PF13476.1 202 3.8e-05 16.6 6.9 1 1 2.4e-06 9e-05 15.4 6.9 10 120 19 219 12 231 0.53 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 AAA_18 PF13238.1 129 9e-07 21.8 4.5 1 2 3.6e-05 0.0027 10.5 0.5 1 39 34 78 34 166 0.76 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_18 PF13238.1 129 9e-07 21.8 4.5 2 2 1.4e-05 0.0011 11.8 0.0 1 23 327 367 327 470 0.74 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_27 - 257 adh_short PF00106.20 167 1.7e-09 30.3 0.0 1 1 2.8e-11 2.1e-09 30.0 0.0 10 163 18 175 7 179 0.78 # 19713 # 20483 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 2_3 - 300 CbiA PF01656.18 195 1.1e-29 95.7 0.2 1 1 2.2e-31 1.7e-29 95.1 0.2 1 192 5 259 5 262 0.78 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_34 - 489 AAA_14 PF13173.1 128 1.2e-09 30.7 5.3 1 2 8.5e-06 0.00032 13.1 0.3 4 46 33 75 30 182 0.64 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_14 PF13173.1 128 1.2e-09 30.7 5.3 2 2 6.1e-07 2.3e-05 16.8 0.1 2 57 324 382 323 483 0.66 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 AAA_14 PF13173.1 128 0.00013 14.4 0.5 1 1 1.6e-05 0.0006 12.3 0.3 2 87 29 114 28 193 0.79 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 TIGR03594 TIGR03594 432 0.0051 8.0 9.3 1 2 0.00011 0.0083 7.3 0.0 177 199 33 55 9 62 0.77 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 TIGR03594 TIGR03594 432 0.0051 8.0 9.3 2 2 0.00072 0.054 4.6 0.0 2 23 326 347 325 351 0.77 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_29 PF13555.1 62 6.1e-11 34.3 0.0 1 2 1.9e-05 0.00071 11.7 0.0 25 41 33 49 21 59 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_29 PF13555.1 62 6.1e-11 34.3 0.0 2 2 5.7e-08 2.2e-06 19.7 0.0 17 43 319 344 312 347 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 AAA_29 PF13555.1 62 0.00052 12.1 0.2 1 1 2.6e-05 0.001 11.2 0.2 22 40 28 46 17 51 0.82 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 AAA PF00004.24 132 3.2e-09 29.6 0.6 1 2 1e-06 7.7e-05 15.4 0.0 2 31 35 66 34 138 0.67 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA PF00004.24 132 3.2e-09 29.6 0.6 2 2 1.7e-05 0.0013 11.4 0.0 2 23 328 349 327 397 0.79 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Bac_DnaA PF00308.13 219 1.9e-05 16.9 0.1 1 2 0.00059 0.045 5.9 0.0 31 59 28 56 11 75 0.82 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Bac_DnaA PF00308.13 219 1.9e-05 16.9 0.1 2 2 0.00011 0.0084 8.2 0.0 39 68 329 358 324 374 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_27 - 257 KR PF08659.5 181 2e-06 20.1 0.0 1 1 4.1e-08 3.1e-06 19.5 0.0 12 90 20 95 8 112 0.82 # 19713 # 20483 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 2_34 - 489 Sigma54_activat PF00158.21 168 1.6e-05 16.9 0.1 1 2 0.00098 0.075 5.0 0.0 23 51 32 60 12 74 0.79 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Sigma54_activat PF00158.21 168 1.6e-05 16.9 0.1 2 2 5.4e-05 0.0041 9.1 0.0 9 46 311 348 305 362 0.87 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 MMR_HSR1 PF01926.18 116 3.3e-09 29.3 1.1 1 2 5.7e-07 4.3e-05 16.0 0.1 1 91 33 159 33 210 0.69 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 MMR_HSR1 PF01926.18 116 3.3e-09 29.3 1.1 2 2 4.5e-05 0.0034 9.9 0.0 2 21 327 346 326 353 0.88 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 DUF258 PF03193.11 161 5.6e-10 31.1 0.1 1 2 2.1e-06 8.1e-05 14.4 0.0 25 68 22 64 1 69 0.70 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 DUF258 PF03193.11 161 5.6e-10 31.1 0.1 2 2 2.2e-06 8.3e-05 14.3 0.0 20 58 308 347 290 436 0.85 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 DUF258 PF03193.11 161 1e-05 17.3 0.7 1 1 4.8e-07 1.8e-05 16.5 0.7 13 60 6 54 1 103 0.84 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 942 TraG-D_C PF12696.2 128 1.7e-33 107.8 3.2 1 2 7.6e-35 5.8e-33 106.0 0.2 1 127 616 733 616 734 0.90 # 3623 # 6448 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.316 1_7 - 942 TraG-D_C PF12696.2 128 1.7e-33 107.8 3.2 2 2 0.018 1.4 1.4 0.3 50 95 807 854 799 881 0.59 # 3623 # 6448 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.316 2_3 - 300 AAA_31 PF13614.1 157 3.7e-11 35.7 2.0 1 1 2e-11 1.5e-09 30.5 2.0 2 150 4 191 3 196 0.81 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 2_34 - 489 NTPase_1 PF03266.10 168 2.4e-06 19.9 1.1 1 2 0.00019 0.015 7.5 0.5 2 26 34 58 33 68 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 NTPase_1 PF03266.10 168 2.4e-06 19.9 1.1 2 2 3.2e-05 0.0024 10.1 0.0 2 24 327 349 326 355 0.87 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_33 PF13671.1 143 6.9e-07 21.8 0.2 1 2 6.6e-05 0.005 9.2 0.0 3 24 35 56 34 92 0.85 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_33 PF13671.1 143 6.9e-07 21.8 0.2 2 2 6.3e-05 0.0048 9.3 0.0 2 22 327 347 327 399 0.81 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_27 - 257 2-Hacid_dh_C PF02826.14 178 0.00064 11.4 0.1 1 2 2.5e-05 0.0019 9.8 0.0 33 78 3 51 1 67 0.79 # 19713 # 20483 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 2_27 - 257 2-Hacid_dh_C PF02826.14 178 0.00064 11.4 0.1 2 2 0.061 4.7 -1.2 0.0 27 51 60 84 51 87 0.48 # 19713 # 20483 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 2_34 - 489 AAA_30 PF13604.1 196 7.7e-06 18.1 2.2 1 2 8.8e-05 0.0033 9.5 0.0 22 47 35 60 23 92 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_30 PF13604.1 196 7.7e-06 18.1 2.2 2 2 0.00062 0.024 6.7 0.0 22 43 328 349 320 377 0.82 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 AAA_30 PF13604.1 196 0.0006 11.9 0.1 1 1 3.8e-05 0.0015 10.7 0.1 17 40 28 51 22 165 0.73 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 FtsK_SpoIIIE PF01580.13 205 3.5e-05 15.8 0.1 1 2 0.00094 0.072 5.0 0.0 40 59 33 52 12 57 0.83 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 FtsK_SpoIIIE PF01580.13 205 3.5e-05 15.8 0.1 2 2 0.00011 0.0084 8.1 0.0 28 58 314 344 298 348 0.80 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Dynamin_N PF00350.18 168 0.043 6.1 20.0 1 1 0.00025 0.019 7.3 0.0 1 20 327 346 327 351 0.93 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ABC_tran PF00005.22 137 3.3e-41 133.3 11.9 1 4 1e-12 2.5e-11 36.5 0.3 8 47 28 67 21 90 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ABC_tran PF00005.22 137 3.3e-41 133.3 11.9 2 4 1.1e-09 2.9e-08 26.6 0.0 105 137 99 131 70 131 0.83 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ABC_tran PF00005.22 137 3.3e-41 133.3 11.9 3 4 0.0035 0.09 5.6 2.2 38 92 174 271 161 306 0.69 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ABC_tran PF00005.22 137 3.3e-41 133.3 11.9 4 4 3.7e-22 9.4e-21 67.1 0.1 1 137 314 438 314 438 0.75 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 ABC_tran PF00005.22 137 1.6e-29 95.5 0.1 1 1 1.1e-30 2.7e-29 94.7 0.1 1 137 19 151 19 151 0.94 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 665 ABC_tran PF00005.22 137 0.081 5.8 7.4 1 1 0.0011 0.028 7.2 2.3 15 43 261 310 257 478 0.69 # 10558 # 12552 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.320 2_34 - 489 TIGR03263 TIGR03263 180 0.023 6.5 8.8 1 4 0.0032 0.24 3.2 0.1 6 25 36 55 32 64 0.81 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 TIGR03263 TIGR03263 180 0.023 6.5 8.8 2 4 0.046 3.5 -0.6 0.8 87 151 161 219 141 233 0.58 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 TIGR03263 TIGR03263 180 0.023 6.5 8.8 3 4 0.074 5.7 -1.3 0.2 129 149 252 272 221 285 0.66 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 TIGR03263 TIGR03263 180 0.023 6.5 8.8 4 4 0.00037 0.028 6.2 0.0 4 31 327 354 324 361 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ATP-synt_ab PF00006.20 215 4.9e-06 18.7 0.1 1 2 6.3e-05 0.0048 8.9 0.0 16 40 32 56 23 240 0.94 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ATP-synt_ab PF00006.20 215 4.9e-06 18.7 0.1 2 2 0.00014 0.01 7.8 0.0 13 39 322 348 315 363 0.87 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 RuvB_N PF05496.7 234 0.00033 12.2 0.1 1 2 0.00024 0.018 6.6 0.0 50 75 31 56 16 68 0.86 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 RuvB_N PF05496.7 234 0.00033 12.2 0.1 2 2 0.0034 0.26 2.8 0.0 53 74 327 348 320 358 0.86 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_19 PF13245.1 76 7.9e-07 21.4 0.0 1 2 4.3e-06 0.00033 13.0 0.0 14 33 35 53 29 60 0.87 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_19 PF13245.1 76 7.9e-07 21.4 0.0 2 2 0.0011 0.087 5.2 0.0 13 35 328 348 319 386 0.80 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_13 - 324 NAD_binding_10 PF13460.1 183 6.4e-05 15.5 0.1 1 1 1.2e-06 9e-05 15.0 0.1 1 38 152 192 152 240 0.88 # 8965 # 9936 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 1_12 - 665 AAA_10 PF12846.2 304 2.5e-61 200.2 1.8 1 1 1.3e-62 4.9e-61 199.2 1.8 4 300 260 617 257 621 0.91 # 10558 # 12552 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.320 2_34 - 489 AAA_10 PF12846.2 304 9.7e-06 17.7 3.4 1 2 0.00012 0.0046 8.9 1.6 5 114 35 170 33 245 0.56 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_10 PF12846.2 304 9.7e-06 17.7 3.4 2 2 0.00028 0.011 7.7 0.0 2 24 325 347 324 352 0.89 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_27 - 257 adh_short_C2 PF13561.1 241 1.1e-78 256.9 0.0 1 1 1.6e-80 1.2e-78 256.7 0.0 1 241 13 253 13 253 0.98 # 19713 # 20483 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.361 2_35 - 232 SbcCD_C PF13558.1 90 0.00027 13.4 0.0 1 1 1.5e-05 0.00057 12.4 0.0 62 88 139 165 120 167 0.83 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 SbcCD_C PF13558.1 90 0.00035 13.0 7.2 1 2 0.0088 0.33 3.5 0.1 30 77 100 134 90 146 0.60 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 SbcCD_C PF13558.1 90 0.00035 13.0 7.2 2 2 7.4e-05 0.0028 10.1 0.2 23 84 400 448 367 454 0.71 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 1_12 - 665 Zot PF05707.7 193 0.00026 13.0 0.5 1 2 0.09 6.8 -1.4 0.0 5 31 262 287 261 292 0.68 # 10558 # 12552 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.320 1_12 - 665 Zot PF05707.7 193 0.00026 13.0 0.5 2 2 1.3e-05 0.00095 11.2 0.1 83 128 530 575 462 612 0.84 # 10558 # 12552 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.320 2_34 - 489 DUF3584 PF12128.3 1201 0.042 3.6 24.3 1 3 0.0017 0.13 1.9 0.4 21 37 35 51 31 52 0.85 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 DUF3584 PF12128.3 1201 0.042 3.6 24.3 2 3 0.00067 0.051 3.3 13.5 252 531 189 275 155 316 0.49 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 DUF3584 PF12128.3 1201 0.042 3.6 24.3 3 3 0.00023 0.017 4.8 0.1 21 35 328 342 322 344 0.86 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 PduV-EutP PF10662.4 143 1e-07 24.1 0.5 1 3 1.8e-05 0.0014 10.7 0.1 2 24 32 54 31 71 0.88 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 PduV-EutP PF10662.4 143 1e-07 24.1 0.5 2 3 0.054 4.1 -0.6 0.0 47 73 140 168 122 200 0.80 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 PduV-EutP PF10662.4 143 1e-07 24.1 0.5 3 3 5.5e-05 0.0042 9.1 0.0 2 23 325 346 324 364 0.88 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_13 - 324 Epimerase PF01370.16 236 0.00026 12.9 0.0 1 1 5.3e-06 0.0004 12.3 0.0 1 39 152 191 152 216 0.80 # 8965 # 9936 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 1_12 - 665 DUF853 PF05872.7 504 1.5e-06 19.3 0.3 1 2 0.00087 0.066 3.9 0.1 22 64 258 300 247 310 0.85 # 10558 # 12552 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.320 1_12 - 665 DUF853 PF05872.7 504 1.5e-06 19.3 0.3 2 2 1.5e-06 0.00011 13.1 0.0 261 362 530 639 521 647 0.85 # 10558 # 12552 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.320 1_7 - 942 TrwB_AAD_bind PF10412.4 386 4.3e-20 64.1 0.3 1 2 0.04 1 0.3 0.0 16 58 223 268 216 274 0.78 # 3623 # 6448 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.316 1_7 - 942 TrwB_AAD_bind PF10412.4 386 4.3e-20 64.1 0.3 2 2 4.1e-20 1e-18 59.5 0.1 234 373 606 740 556 747 0.83 # 3623 # 6448 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.316 1_12 - 665 TrwB_AAD_bind PF10412.4 386 2.1e-06 19.1 0.0 1 1 2.3e-07 5.8e-06 17.6 0.0 19 72 261 322 245 327 0.83 # 10558 # 12552 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.320 2_34 - 489 TrwB_AAD_bind PF10412.4 386 1.6e-05 16.1 0.5 1 2 0.00041 0.01 6.9 0.1 16 38 32 54 22 62 0.85 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 TrwB_AAD_bind PF10412.4 386 1.6e-05 16.1 0.5 2 2 0.00045 0.011 6.8 0.1 16 39 325 348 323 351 0.90 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_3 - 300 ParA PF10609.4 81 5.5e-05 15.6 0.0 1 1 1.9e-06 0.00014 14.3 0.0 2 49 161 206 160 228 0.84 # 1704 # 2603 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.247 1_7 - 942 T4SS-DNA_transf PF02534.9 469 6.5e-35 113.0 8.1 1 2 3.6e-20 2.7e-18 58.2 1.0 16 258 190 459 172 464 0.75 # 3623 # 6448 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.316 1_7 - 942 T4SS-DNA_transf PF02534.9 469 6.5e-35 113.0 8.1 2 2 3.3e-20 2.5e-18 58.3 1.1 257 433 565 741 554 758 0.82 # 3623 # 6448 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.316 2_13 - 324 DapB_N PF01113.15 124 3.7e-06 19.4 0.2 1 2 0.042 3.2 0.2 0.0 92 103 121 132 115 142 0.84 # 8965 # 9936 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 2_13 - 324 DapB_N PF01113.15 124 3.7e-06 19.4 0.2 2 2 5.1e-07 3.9e-05 16.1 0.2 3 97 152 242 150 250 0.78 # 8965 # 9936 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 2_34 - 489 Herpes_TK PF00693.13 281 0.00049 11.8 1.6 1 2 0.011 0.8 1.2 0.0 1 33 38 70 38 83 0.77 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Herpes_TK PF00693.13 281 0.00049 11.8 1.6 2 2 5.9e-05 0.0045 8.6 0.0 1 42 331 370 331 400 0.81 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 ArgK PF03308.11 267 0.00014 13.2 0.1 1 1 5.7e-06 0.00022 12.6 0.1 14 56 14 57 3 63 0.79 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 ArgK PF03308.11 267 0.0084 7.3 6.0 1 2 0.034 1.3 0.2 0.0 31 53 33 55 26 63 0.82 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ArgK PF03308.11 267 0.0084 7.3 6.0 2 2 6.1e-05 0.0023 9.2 0.1 5 52 304 347 300 352 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Pox_A32 PF04665.7 241 4.1e-07 22.0 0.1 1 2 1.1e-05 0.00084 11.2 0.0 5 35 22 53 18 58 0.83 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 Pox_A32 PF04665.7 241 4.1e-07 22.0 0.1 2 2 0.00014 0.01 7.6 0.0 15 37 326 348 317 350 0.91 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 GTP_EFTU PF00009.22 188 1.5e-05 17.0 1.5 1 2 0.00031 0.024 6.6 0.0 5 38 33 66 30 85 0.76 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 GTP_EFTU PF00009.22 188 1.5e-05 17.0 1.5 2 2 7.5e-05 0.0057 8.6 0.0 5 37 326 358 324 386 0.81 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 RNA_helicase PF00910.17 107 9e-07 21.6 1.2 1 3 0.00022 0.017 7.9 0.0 2 23 35 56 34 79 0.79 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 RNA_helicase PF00910.17 107 9e-07 21.6 1.2 2 3 0.072 5.5 -0.2 0.4 36 97 180 240 159 247 0.56 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 RNA_helicase PF00910.17 107 9e-07 21.6 1.2 3 3 4.3e-05 0.0033 10.2 0.0 1 38 327 364 327 373 0.85 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 UPF0079 PF02367.12 123 7.5e-06 18.1 0.1 1 1 4.3e-07 1.6e-05 17.1 0.1 6 36 20 50 15 62 0.86 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 UPF0079 PF02367.12 123 2e-05 16.8 0.1 1 2 0.0026 0.1 4.8 0.1 18 40 34 56 27 64 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 UPF0079 PF02367.12 123 2e-05 16.8 0.1 2 2 0.00011 0.0041 9.3 0.0 6 41 315 351 310 376 0.83 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_24 PF13479.1 213 6.1e-05 15.2 0.7 1 2 0.00031 0.024 6.7 0.1 5 25 33 54 30 58 0.85 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_24 PF13479.1 213 6.1e-05 15.2 0.7 2 2 0.00053 0.04 6.0 0.1 5 21 326 342 324 348 0.87 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 NACHT PF05729.7 166 3.7e-12 38.7 0.0 1 2 8.4e-07 6.4e-05 15.2 0.0 3 27 34 58 32 128 0.75 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 NACHT PF05729.7 166 3.7e-12 38.7 0.0 2 2 1e-08 7.9e-07 21.4 0.0 3 71 327 392 325 439 0.79 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_25 PF13481.1 194 1.7e-05 16.8 0.0 1 2 0.0008 0.03 6.2 0.0 17 54 13 52 2 68 0.71 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_25 PF13481.1 194 1.7e-05 16.8 0.0 2 2 0.00024 0.0091 7.9 0.0 30 52 321 343 310 353 0.86 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_35 - 232 AAA_25 PF13481.1 194 0.00025 13.0 0.4 1 1 3.5e-05 0.0013 10.6 0.4 30 54 26 50 4 171 0.91 # 27429 # 28124 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.300 2_34 - 489 ABC_tran_2 PF12848.2 85 2.4e-09 29.5 27.4 1 2 1.3e-08 9.7e-07 21.2 18.6 4 65 174 235 172 238 0.97 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 ABC_tran_2 PF12848.2 85 2.4e-09 29.5 27.4 2 2 4.3e-06 0.00033 13.1 1.5 54 84 255 284 242 285 0.75 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_28 PF13521.1 163 1.4e-12 40.4 0.5 1 3 6.7e-08 5.1e-06 19.0 0.0 1 22 33 54 33 83 0.83 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_28 PF13521.1 163 1.4e-12 40.4 0.5 2 3 0.089 6.7 -0.9 0.4 40 40 202 202 161 245 0.54 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_28 PF13521.1 163 1.4e-12 40.4 0.5 3 3 1.6e-07 1.2e-05 17.9 0.0 1 43 326 370 326 409 0.78 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_5 PF07728.9 139 5.3e-07 22.0 6.0 1 2 8.8e-05 0.0067 8.7 0.0 3 30 35 62 33 110 0.84 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 2_34 - 489 AAA_5 PF07728.9 139 5.3e-07 22.0 6.0 2 2 2.7e-06 0.00021 13.6 0.0 2 43 327 372 326 454 0.85 # 25426 # 26892 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.312 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/d9ad04e7-1cd3-4147-b31c-96f5030b2f0c # Target file: checkm_output/bins/pGCA_001717705.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001717705.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d9ad04e7-1cd3-4147-b31c-96f5030b2f0c checkm_output/bins/pGCA_001717705.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:46:24 2020 # [ok]