# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_20 - 249 Methyltransf_32 PF13679.1 141 2.6e-05 16.7 0.0 1 1 4.5e-07 4.1e-05 16.1 0.0 10 80 26 95 19 134 0.79 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 1_20 - 249 Methyltransf_12 PF08242.7 99 4.2e-06 20.0 0.0 1 1 1.2e-07 1.1e-05 18.7 0.0 2 99 52 140 51 140 0.77 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 1_22 - 697 TIGR00392 TIGR00392 861 4.5e-230 758.6 12.7 1 1 1.8e-231 5.4e-230 758.3 12.7 141 857 1 688 1 691 0.96 # 16867 # 18957 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.295 1_21 - 107 TIGR00392 TIGR00392 861 1.3e-42 138.3 0.2 1 1 4.5e-44 1.4e-42 138.3 0.2 10 108 7 105 1 106 0.95 # 16457 # 16777 # 1 # ID=1_21;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.336 7_1 - 47 TIGR00392 TIGR00392 861 4.9e-16 50.4 0.0 1 1 1.6e-17 4.9e-16 50.4 0.0 558 597 4 43 1 46 0.91 # 3 # 143 # 1 # ID=7_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 4_17 - 440 IstB_IS21 PF01695.12 178 0.00016 13.9 0.1 1 1 8.3e-06 0.00076 11.7 0.0 46 70 274 298 258 317 0.84 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_20 - 249 Methyltransf_18 PF12847.2 112 9.9e-10 31.8 0.0 1 1 3.7e-11 3.4e-09 30.1 0.0 3 110 48 143 46 145 0.84 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 1_13 - 316 DUF87 PF01935.12 229 4.2e-06 19.5 0.0 1 1 9.7e-08 8.9e-06 18.4 0.0 24 60 140 174 102 177 0.89 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 4_17 - 440 NB-ARC PF00931.17 287 8.6e-06 17.5 0.2 1 1 3.8e-07 3.5e-05 15.5 0.1 22 47 278 304 262 437 0.54 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 2_13 - 324 NmrA PF05368.8 233 8.4e-06 17.9 0.7 1 1 2.1e-07 1.9e-05 16.8 0.7 1 52 152 205 152 275 0.90 # 9901 # 10872 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 4_17 - 440 AAA_22 PF13401.1 131 9.5e-09 28.3 1.5 1 1 5.3e-10 2.4e-08 27.0 0.0 5 120 276 411 270 421 0.78 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_13 - 316 AAA_22 PF13401.1 131 1.2e-07 24.7 0.0 1 1 5.9e-09 2.7e-07 23.6 0.0 5 124 140 280 135 286 0.73 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_20 - 249 Methyltransf_11 PF08241.7 95 2.1e-10 33.8 0.0 1 1 5.2e-12 4.8e-10 32.7 0.0 2 95 52 142 51 142 0.86 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 1_13 - 316 PRK PF00485.13 194 0.00038 12.8 0.0 1 1 6.3e-06 0.00058 12.2 0.0 2 98 142 238 141 255 0.74 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 4_13 - 98 SRP54 PF00448.17 196 0.00044 12.5 0.1 1 1 6.3e-06 0.00058 12.1 0.1 5 28 40 63 36 84 0.83 # 7678 # 7971 # -1 # ID=4_13;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=5bp;gc_cont=0.279 4_12 - 147 AAA_15 PF13175.1 415 1.5e-06 20.2 0.9 1 1 2.6e-08 2.4e-06 19.6 0.9 371 411 69 111 9 112 0.90 # 7271 # 7711 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.299 4_3 - 225 AAA_17 PF13207.1 121 4.4e-06 20.3 1.1 1 1 3.4e-07 6.3e-06 19.8 1.1 23 113 24 122 20 205 0.85 # 1504 # 2178 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AAAAA;rbs_spacer=12bp;gc_cont=0.344 4_16 - 225 AAA_17 PF13207.1 121 7.9e-06 19.5 1.1 1 1 6.8e-07 1.3e-05 18.9 1.1 26 113 27 122 17 205 0.84 # 9390 # 10064 # -1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=AAAAA;rbs_spacer=12bp;gc_cont=0.339 4_8 - 225 AAA_17 PF13207.1 121 8.4e-06 19.4 1.0 1 1 6.3e-07 1.2e-05 19.0 1.0 26 113 27 122 17 205 0.84 # 5384 # 6058 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AAAAA;rbs_spacer=12bp;gc_cont=0.339 4_17 - 440 AAA_17 PF13207.1 121 5.7e-05 16.8 0.1 1 1 5.2e-05 0.00095 12.8 0.0 2 21 278 297 277 400 0.66 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_13 - 316 AAA_17 PF13207.1 121 0.0003 14.4 0.1 1 1 5.3e-05 0.00098 12.8 0.1 2 24 142 168 141 271 0.49 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 4_17 - 440 AAA_21 PF13304.1 303 8.4e-17 54.8 3.0 1 3 1.2e-07 3.6e-06 19.9 0.1 236 303 53 114 21 114 0.84 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 AAA_21 PF13304.1 303 8.4e-17 54.8 3.0 2 3 8.7e-08 2.7e-06 20.3 0.0 3 21 279 297 278 312 0.86 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 AAA_21 PF13304.1 303 8.4e-17 54.8 3.0 3 3 1.3e-05 0.00039 13.2 0.2 232 302 356 420 311 421 0.70 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_12 - 147 AAA_21 PF13304.1 303 1e-13 44.6 1.5 1 1 4.3e-15 1.3e-13 44.3 1.5 179 297 13 110 6 116 0.90 # 7271 # 7711 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.299 4_13 - 98 AAA_21 PF13304.1 303 1.4e-05 17.9 0.7 1 1 4.6e-07 1.4e-05 17.9 0.7 3 54 40 80 38 87 0.74 # 7678 # 7971 # -1 # ID=4_13;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=5bp;gc_cont=0.279 4_13 - 98 Miro PF08477.8 119 7.2e-05 16.1 0.0 1 1 2.2e-06 0.0001 15.6 0.0 5 51 42 92 40 97 0.85 # 7678 # 7971 # -1 # ID=4_13;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=5bp;gc_cont=0.279 4_17 - 440 Miro PF08477.8 119 0.00024 14.4 0.0 1 1 5.1e-05 0.0023 11.2 0.0 2 20 278 296 277 316 0.88 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 MobB PF03205.9 140 0.00026 13.5 0.0 1 1 1.7e-05 0.00078 12.0 0.0 3 24 278 299 276 308 0.87 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_13 - 98 MobB PF03205.9 140 0.00046 12.7 0.2 1 1 1.9e-05 0.00089 11.8 0.1 2 25 38 61 37 75 0.87 # 7678 # 7971 # -1 # ID=4_13;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=5bp;gc_cont=0.279 2_13 - 324 ADH_zinc_N PF00107.21 130 1.5e-16 52.9 0.0 1 1 3.7e-18 3.4e-16 51.8 0.0 1 117 160 270 160 285 0.90 # 9901 # 10872 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 1_20 - 249 Methyltransf_29 PF03141.11 506 0.00015 12.9 0.0 1 1 1.8e-06 0.00017 12.8 0.0 98 216 29 141 16 207 0.76 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 4_17 - 440 AFG1_ATPase PF03969.11 362 0.00074 11.1 0.0 1 2 0.074 6.8 -1.9 8.5 5 49 137 181 134 203 0.71 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 AFG1_ATPase PF03969.11 362 0.00074 11.1 0.0 2 2 8e-06 0.00074 11.1 0.0 47 88 259 301 214 356 0.79 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_13 - 98 T2SE PF00437.15 272 0.00022 13.0 0.1 1 1 4.7e-06 0.00022 13.0 0.1 133 171 41 79 5 92 0.80 # 7678 # 7971 # -1 # ID=4_13;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=5bp;gc_cont=0.279 1_13 - 316 T2SE PF00437.15 272 0.00065 11.4 0.0 1 1 2.7e-05 0.0012 10.5 0.0 125 160 136 171 92 179 0.75 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 4_13 - 98 Zeta_toxin PF06414.7 201 0.00066 11.6 0.0 1 1 8.1e-06 0.00075 11.4 0.0 23 49 43 70 22 82 0.83 # 7678 # 7971 # -1 # ID=4_13;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=5bp;gc_cont=0.279 4_17 - 440 SMC_N PF02463.14 220 6.7e-12 37.8 8.6 1 3 2.2e-06 0.0002 13.4 0.0 133 208 50 120 17 130 0.81 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 SMC_N PF02463.14 220 6.7e-12 37.8 8.6 2 3 4.2e-06 0.00039 12.5 0.0 24 46 276 297 257 326 0.81 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 SMC_N PF02463.14 220 6.7e-12 37.8 8.6 3 3 3.3e-07 3e-05 16.1 0.1 110 186 328 406 314 431 0.79 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 Arch_ATPase PF01637.13 234 4e-05 16.2 3.5 1 2 0.018 1.6 1.1 1.5 51 101 137 187 111 228 0.51 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 Arch_ATPase PF01637.13 234 4e-05 16.2 3.5 2 2 2e-06 0.00019 14.0 0.0 25 126 280 386 272 430 0.73 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 AAA_16 PF13191.1 185 4.8e-07 22.7 2.1 1 2 0.037 1.7 1.3 1.2 48 130 123 200 110 236 0.54 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 AAA_16 PF13191.1 185 4.8e-07 22.7 2.1 2 2 7e-08 3.2e-06 20.0 0.0 12 51 264 302 261 377 0.74 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_13 - 316 AAA_16 PF13191.1 185 0.00029 13.6 0.4 1 1 2.1e-05 0.00098 11.9 0.4 21 49 136 164 124 285 0.70 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 4_17 - 440 AAA_23 PF13476.1 202 2.1e-05 17.7 0.1 1 1 4.6e-07 2.1e-05 17.7 0.1 22 40 278 296 266 301 0.87 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_13 - 98 AAA_23 PF13476.1 202 0.00035 13.7 3.0 1 1 1.1e-05 0.00052 13.1 2.8 14 42 30 59 10 92 0.71 # 7678 # 7971 # -1 # ID=4_13;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=5bp;gc_cont=0.279 4_17 - 440 AAA_18 PF13238.1 129 0.00044 13.4 1.2 1 1 2.6e-05 0.0012 12.0 0.0 1 23 278 318 278 420 0.75 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_7 - 499 AAA_18 PF13238.1 129 0.047 6.8 9.4 1 1 3.9e-05 0.0018 11.4 0.3 1 68 213 289 213 345 0.66 # 4335 # 5831 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 1_20 - 249 Methyltransf_25 PF13649.1 101 9e-10 31.7 0.0 1 2 0.082 7.6 -0.2 0.0 31 46 20 35 7 44 0.80 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 1_20 - 249 Methyltransf_25 PF13649.1 101 9e-10 31.7 0.0 2 2 1.2e-10 1.1e-08 28.2 0.0 1 101 50 138 50 138 0.87 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 4_17 - 440 AAA_14 PF13173.1 128 8.7e-06 18.5 4.2 1 3 0.063 5.8 -0.4 0.0 62 98 72 108 41 133 0.59 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 AAA_14 PF13173.1 128 8.7e-06 18.5 4.2 2 3 0.093 8.6 -0.9 0.9 53 53 138 138 84 252 0.60 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 AAA_14 PF13173.1 128 8.7e-06 18.5 4.2 3 3 2.7e-07 2.5e-05 17.0 0.1 2 57 275 333 274 434 0.67 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_22 - 697 tRNA-synt_1 PF00133.17 601 7.9e-186 611.3 1.4 1 1 2.6e-187 7.9e-186 611.3 1.4 128 601 1 488 1 488 0.99 # 16867 # 18957 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.295 1_21 - 107 tRNA-synt_1 PF00133.17 601 3.4e-38 123.7 0.1 1 1 1.2e-39 3.7e-38 123.6 0.1 2 95 12 105 11 106 0.97 # 16457 # 16777 # 1 # ID=1_21;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.336 7_1 - 47 tRNA-synt_1 PF00133.17 601 7.6e-15 46.6 0.0 1 1 2.5e-16 7.8e-15 46.6 0.0 505 549 1 45 1 46 0.94 # 3 # 143 # 1 # ID=7_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 1_22 - 697 tRNA-synt_1g PF09334.6 391 1.8e-18 59.1 4.9 1 4 0.00031 0.014 6.7 0.0 91 135 7 51 2 69 0.87 # 16867 # 18957 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.295 1_22 - 697 tRNA-synt_1g PF09334.6 391 1.8e-18 59.1 4.9 2 4 0.037 1.7 -0.1 0.0 47 118 166 237 162 242 0.90 # 16867 # 18957 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.295 1_22 - 697 tRNA-synt_1g PF09334.6 391 1.8e-18 59.1 4.9 3 4 2.6e-05 0.0012 10.3 0.2 164 238 240 313 228 324 0.80 # 16867 # 18957 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.295 1_22 - 697 tRNA-synt_1g PF09334.6 391 1.8e-18 59.1 4.9 4 4 1e-14 4.8e-13 41.2 0.1 244 387 371 507 358 509 0.75 # 16867 # 18957 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.295 1_21 - 107 tRNA-synt_1g PF09334.6 391 3.8e-09 28.4 0.0 1 1 1.2e-10 5.7e-09 27.8 0.0 10 59 44 93 40 105 0.91 # 16457 # 16777 # 1 # ID=1_21;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.336 4_17 - 440 AAA_29 PF13555.1 62 9.3e-07 21.2 0.0 1 1 7.5e-08 2.3e-06 19.9 0.0 17 43 270 295 263 298 0.84 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_13 - 316 AAA_29 PF13555.1 62 0.00013 14.3 0.1 1 1 1.5e-05 0.00047 12.5 0.1 25 49 141 165 129 170 0.80 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 4_13 - 98 AAA_29 PF13555.1 62 0.00029 13.2 0.1 1 1 1.3e-05 0.00039 12.8 0.1 22 50 35 63 25 74 0.75 # 7678 # 7971 # -1 # ID=4_13;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=5bp;gc_cont=0.279 4_17 - 440 AAA PF00004.24 132 0.00034 13.6 0.2 1 1 3.1e-05 0.0014 11.6 0.0 2 23 279 300 278 347 0.79 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_7 - 499 AAA PF00004.24 132 0.0031 10.5 6.4 1 1 6.6e-06 0.00031 13.8 0.5 1 129 213 389 213 392 0.73 # 4335 # 5831 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 1_20 - 249 Ubie_methyltran PF01209.13 233 3.3e-05 15.9 0.5 1 2 1.5e-06 0.00014 13.8 0.1 45 150 44 141 14 161 0.77 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 1_20 - 249 Ubie_methyltran PF01209.13 233 3.3e-05 15.9 0.5 2 2 0.051 4.7 -1.0 0.0 6 23 170 187 164 203 0.82 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 1_22 - 697 tRNA-synt_1_2 PF13603.1 185 9.9e-05 14.5 0.0 1 1 2.4e-06 0.00022 13.3 0.0 86 144 139 201 61 232 0.70 # 16867 # 18957 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.295 4_17 - 440 MMR_HSR1 PF01926.18 116 0.00047 12.9 3.4 1 2 0.014 1.3 1.8 0.0 44 92 62 112 13 161 0.70 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 MMR_HSR1 PF01926.18 116 0.00047 12.9 3.4 2 2 3.1e-05 0.0029 10.4 0.0 2 21 278 297 277 316 0.87 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 DUF258 PF03193.11 161 4.3e-05 15.5 0.0 1 1 1.9e-06 8.6e-05 14.6 0.0 20 58 259 298 241 387 0.85 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_13 - 98 DUF258 PF03193.11 161 0.0001 14.3 0.1 1 1 2.4e-06 0.00011 14.2 0.1 12 66 12 67 2 85 0.81 # 7678 # 7971 # -1 # ID=4_13;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=5bp;gc_cont=0.279 1_20 - 249 Methyltransf_26 PF13659.1 117 4.9e-05 16.2 0.0 1 1 1.2e-06 0.00011 15.1 0.0 2 111 48 140 47 146 0.74 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 1_13 - 316 GBP PF02263.14 260 0.00023 13.1 0.0 1 1 3.7e-06 0.00034 12.5 0.0 11 44 129 162 120 199 0.87 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_20 - 249 TehB PF03848.9 192 4.6e-05 15.4 3.1 1 1 1.8e-06 0.00017 13.6 2.0 31 139 47 149 23 199 0.69 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 1_13 - 316 FtsK_SpoIIIE PF01580.13 205 5.9e-11 35.0 0.0 1 1 3.9e-12 1.8e-10 33.4 0.0 23 204 126 283 115 284 0.87 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 5_7 - 499 FtsK_SpoIIIE PF01580.13 205 3.2e-10 32.6 0.0 1 1 1.5e-11 6.8e-10 31.5 0.0 40 205 212 373 177 373 0.74 # 4335 # 5831 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 1_20 - 249 MTS PF05175.9 170 5.9e-06 18.5 0.0 1 1 1e-07 9.4e-06 17.9 0.0 24 138 40 142 20 177 0.76 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 1_22 - 697 tRNA-synt_1f PF01921.13 360 5e-08 24.7 0.1 1 1 1.2e-09 1.1e-07 23.5 0.0 273 335 439 501 401 532 0.72 # 16867 # 18957 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.295 4_17 - 440 ABC_tran PF00005.22 137 1.9e-31 102.0 7.1 1 3 7.3e-10 1.7e-08 27.7 0.0 90 137 34 82 1 82 0.72 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 ABC_tran PF00005.22 137 1.9e-31 102.0 7.1 2 3 0.007 0.16 5.1 2.2 38 92 125 222 112 258 0.67 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 ABC_tran PF00005.22 137 1.9e-31 102.0 7.1 3 3 2.2e-22 5.1e-21 68.2 0.1 1 137 265 389 265 389 0.75 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_13 - 98 ABC_tran PF00005.22 137 1e-16 54.3 0.2 1 1 5.5e-18 1.3e-16 54.0 0.2 1 62 26 87 26 95 0.89 # 7678 # 7971 # -1 # ID=4_13;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=5bp;gc_cont=0.279 4_12 - 147 ABC_tran PF00005.22 137 2.8e-15 49.6 0.1 1 1 4.3e-16 9.9e-15 47.8 0.0 68 137 5 80 1 80 0.88 # 7271 # 7711 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.299 1_13 - 316 ABC_tran PF00005.22 137 7e-07 22.4 0.0 1 1 4.5e-08 1e-06 21.9 0.0 2 61 130 190 129 276 0.65 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 3_20 - 139 K_oxygenase PF13434.1 341 0.00042 12.0 0.5 1 1 5.8e-06 0.00054 11.7 0.5 253 299 84 133 56 138 0.80 # 11483 # 11899 # 1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.276 1_22 - 697 tRNA-synt_1e PF01406.14 301 6.1e-07 21.5 0.0 1 1 1.7e-08 1.6e-06 20.2 0.0 242 299 436 495 419 497 0.75 # 16867 # 18957 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.295 5_3 - 183 FERM_N PF09379.5 80 0.0002 14.2 0.1 1 1 4.3e-06 0.0004 13.3 0.1 14 64 99 148 94 166 0.86 # 1322 # 1870 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.291 1_11 - 189 Methyltransf_2 PF00891.13 242 0.00045 12.2 0.0 1 1 8.1e-06 0.00074 11.5 0.0 16 88 14 87 6 99 0.84 # 8390 # 8956 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 2_13 - 324 NAD_binding_10 PF13460.1 183 7.7e-05 15.5 0.1 1 1 1.2e-06 0.00011 15.0 0.1 1 38 152 192 152 240 0.88 # 9901 # 10872 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 5_7 - 499 AAA_10 PF12846.2 304 7e-14 44.7 0.1 1 2 5.7e-07 2.6e-05 16.5 0.0 4 60 213 271 211 297 0.87 # 4335 # 5831 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 5_7 - 499 AAA_10 PF12846.2 304 7e-14 44.7 0.1 2 2 6.5e-10 3e-08 26.2 0.0 218 294 315 399 277 403 0.85 # 4335 # 5831 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 1_13 - 316 AAA_10 PF12846.2 304 2.4e-07 23.2 0.0 1 2 2.1e-06 9.8e-05 14.6 0.0 3 56 141 194 140 209 0.87 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_13 - 316 AAA_10 PF12846.2 304 2.4e-07 23.2 0.0 2 2 0.00072 0.033 6.3 0.0 203 265 212 284 209 299 0.75 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 4_17 - 440 SbcCD_C PF13558.1 90 0.00029 13.6 7.2 1 2 0.0078 0.36 3.7 0.1 30 77 51 85 39 97 0.62 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 SbcCD_C PF13558.1 90 0.00029 13.6 7.2 2 2 6.5e-05 0.003 10.3 0.1 23 84 351 399 318 405 0.71 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_12 - 147 SbcCD_C PF13558.1 90 0.00063 12.5 0.0 1 1 1.9e-05 0.00088 12.0 0.0 49 89 55 95 44 96 0.80 # 7271 # 7711 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.299 1_20 - 249 Methyltransf_31 PF13847.1 152 3.5e-12 38.9 0.8 1 1 3.8e-14 3.5e-12 38.9 0.8 2 133 45 177 44 220 0.74 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 5_7 - 499 Zot PF05707.7 193 2.2e-08 26.6 0.0 1 1 1.1e-09 1e-07 24.4 0.0 4 144 214 391 213 414 0.66 # 4335 # 5831 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 4_17 - 440 DUF3584 PF12128.3 1201 0.0077 6.3 18.4 1 2 0.00057 0.053 3.5 13.9 350 531 135 226 106 267 0.49 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 DUF3584 PF12128.3 1201 0.0077 6.3 18.4 2 2 0.0002 0.019 5.0 0.1 21 35 279 293 273 295 0.86 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_7 - 499 DUF2075 PF09848.4 352 2.9e-07 22.5 0.0 1 3 0.062 5.7 -1.5 0.1 185 211 112 136 103 150 0.74 # 4335 # 5831 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 5_7 - 499 DUF2075 PF09848.4 352 2.9e-07 22.5 0.0 2 3 3.2e-09 2.9e-07 22.5 0.0 4 117 213 348 211 364 0.68 # 4335 # 5831 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 5_7 - 499 DUF2075 PF09848.4 352 2.9e-07 22.5 0.0 3 3 0.049 4.5 -1.2 1.6 138 169 464 494 451 498 0.59 # 4335 # 5831 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 2_13 - 324 Epimerase PF01370.16 236 0.00032 12.9 0.0 1 1 5.3e-06 0.00049 12.3 0.0 1 39 152 191 152 216 0.80 # 9901 # 10872 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 1_23 - 154 DEAD PF00270.24 169 0.00034 12.9 0.1 1 1 5.9e-06 0.00054 12.3 0.1 80 129 91 144 69 149 0.70 # 19047 # 19508 # 1 # ID=1_23;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 1_13 - 316 TrwB_AAD_bind PF10412.4 386 2.1e-05 16.0 0.0 1 1 3.4e-07 3.2e-05 15.4 0.0 15 77 139 200 122 213 0.85 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 2_13 - 324 DapB_N PF01113.15 124 4.5e-06 19.4 0.2 1 2 0.042 3.9 0.2 0.0 92 103 121 132 115 142 0.84 # 9901 # 10872 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 2_13 - 324 DapB_N PF01113.15 124 4.5e-06 19.4 0.2 2 2 5.1e-07 4.7e-05 16.1 0.2 3 97 152 242 150 250 0.78 # 9901 # 10872 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.315 4_17 - 440 ArgK PF03308.11 267 0.0054 8.3 3.2 1 2 0.079 7.3 -2.0 0.9 181 217 166 202 147 235 0.45 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 ArgK PF03308.11 267 0.0054 8.3 3.2 2 2 2.7e-05 0.0025 9.4 0.1 5 52 255 298 251 303 0.84 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_13 - 316 Pox_A32 PF04665.7 241 0.00019 13.5 0.6 1 2 4.7e-05 0.0043 9.1 0.0 15 38 141 164 130 179 0.85 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_13 - 316 Pox_A32 PF04665.7 241 0.00019 13.5 0.6 2 2 0.0046 0.42 2.6 0.2 116 155 260 301 187 311 0.86 # 9807 # 10754 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.372 1_20 - 249 Methyltransf_23 PF13489.1 161 3.5e-10 32.6 0.0 1 1 4.9e-12 4.5e-10 32.3 0.0 12 120 35 149 21 203 0.78 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 4_17 - 440 RNA_helicase PF00910.17 107 0.00034 13.6 0.5 1 2 0.049 4.6 0.3 0.6 18 98 112 192 109 198 0.63 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 RNA_helicase PF00910.17 107 0.00034 13.6 0.5 2 2 3.7e-05 0.0034 10.4 0.0 1 38 278 315 278 324 0.85 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 NACHT PF05729.7 166 6.1e-07 22.0 0.0 1 1 1.2e-08 1.1e-06 21.2 0.0 3 71 278 343 276 386 0.83 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 5_7 - 499 AAA_25 PF13481.1 194 8.1e-06 18.1 0.0 1 1 2.9e-07 2.7e-05 16.4 0.0 36 175 213 349 198 366 0.73 # 4335 # 5831 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.341 4_17 - 440 ABC_tran_2 PF12848.2 85 1.1e-09 30.9 27.5 1 2 5.2e-09 4.7e-07 22.4 18.7 4 65 125 186 123 189 0.97 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 ABC_tran_2 PF12848.2 85 1.1e-09 30.9 27.5 2 2 3.8e-06 0.00035 13.2 1.5 54 84 206 235 193 236 0.75 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 1_20 - 249 TPMT PF05724.6 218 8.5e-05 14.8 0.0 1 1 1.5e-06 0.00014 14.1 0.0 8 87 19 96 14 114 0.80 # 15684 # 16430 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.244 4_17 - 440 AAA_28 PF13521.1 163 2e-06 20.6 0.2 1 2 0.069 6.3 -0.5 0.5 64 69 148 153 112 197 0.55 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 AAA_28 PF13521.1 163 2e-06 20.6 0.2 2 2 1.5e-07 1.3e-05 17.9 0.0 1 43 277 321 277 356 0.80 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 4_17 - 440 AAA_5 PF07728.9 139 0.00014 14.4 3.9 1 1 2.3e-06 0.00021 13.8 0.0 2 43 278 323 277 405 0.85 # 10683 # 12002 # 1 # ID=4_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.317 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/00862674-a36b-4fc3-b1d1-2b7340cec1a3 # Target file: checkm_output/bins/pGCA_001717685.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001717685.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/00862674-a36b-4fc3-b1d1-2b7340cec1a3 checkm_output/bins/pGCA_001717685.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:46:24 2020 # [ok]