# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_13 - 73 UPF0020 PF01170.13 180 1.8e-05 14.4 0.0 1 1 1.7e-06 2.2e-05 14.1 0.0 100 122 4 26 1 33 0.81 # 9107 # 9325 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.274 1_1 - 359 DNA_methylase PF00145.12 335 1.9e-76 247.3 0.1 1 1 1.7e-77 2.3e-76 247.0 0.1 1 333 3 349 3 351 0.83 # 3 # 1079 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=TATAA;rbs_spacer=11bp;gc_cont=0.313 1_12 - 76 N6_N4_Mtase PF01555.13 231 3.3e-10 29.8 0.3 1 1 8.3e-11 3.6e-10 29.7 0.3 52 119 5 69 3 74 0.89 # 8914 # 9141 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=8bp;gc_cont=0.298 1_13 - 73 N6_N4_Mtase PF01555.13 231 1.7e-06 17.6 0.1 1 1 4.7e-07 2e-06 17.4 0.1 1 54 11 69 11 71 0.75 # 9107 # 9325 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.274 1_11 - 43 N6_N4_Mtase PF01555.13 231 2.3e-06 17.2 0.2 1 1 5.3e-07 2.3e-06 17.2 0.2 168 191 14 40 2 42 0.77 # 8796 # 8924 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.310 1_13 - 73 Methyltransf_26 PF13659.1 117 0.00011 12.3 0.0 1 1 9.9e-06 0.00013 12.1 0.0 67 112 7 68 2 71 0.67 # 9107 # 9325 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.274 1_1 - 359 MTS PF05175.9 170 2.4e-06 17.0 0.0 1 1 2.8e-07 3.7e-06 16.4 0.0 34 108 4 82 1 96 0.86 # 3 # 1079 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=TATAA;rbs_spacer=11bp;gc_cont=0.313 1_13 - 73 Cons_hypoth95 PF03602.10 183 5.9e-05 12.5 0.0 1 1 9e-06 5.9e-05 12.5 0.0 107 138 3 32 1 64 0.78 # 9107 # 9325 # -1 # ID=1_13;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.274 1_1 - 359 Cons_hypoth95 PF03602.10 183 6.1e-05 12.5 0.0 1 1 1.5e-05 9.9e-05 11.8 0.0 44 123 3 81 1 92 0.80 # 3 # 1079 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=TATAA;rbs_spacer=11bp;gc_cont=0.313 1_1 - 359 Methyltransf_15 PF09445.5 164 5.4e-08 22.6 0.0 1 1 7.5e-09 9.7e-08 21.7 0.0 3 87 4 89 2 112 0.78 # 3 # 1079 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=TATAA;rbs_spacer=11bp;gc_cont=0.313 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3d926777-667a-4ad1-8346-3d91e687dc37 # Target file: checkm_output/bins/pGCA_001715615.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001715615.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3d926777-667a-4ad1-8346-3d91e687dc37 checkm_output/bins/pGCA_001715615.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:46:20 2020 # [ok]