# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 321 AAA_10 PF12846.2 304 0.00018 11.3 0.0 1 1 1.8e-05 0.00031 10.6 0.0 222 267 67 115 58 132 0.84 # 496 # 1458 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.588 1_2 - 321 Zot PF05707.7 193 1.8e-28 89.7 0.1 1 1 3.1e-29 5.3e-28 88.2 0.1 2 190 2 178 1 181 0.84 # 496 # 1458 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.588 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/7bb7d7f6-ec0b-4008-88c8-7163287a28dc # Target file: checkm_output/bins/pGCA_001708505.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001708505.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7bb7d7f6-ec0b-4008-88c8-7163287a28dc checkm_output/bins/pGCA_001708505.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:46:19 2020 # [ok]